RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 ELNP15502 786 aa15.26■□□□□ 0.03
NPLOC4-213ENST00000573519 GUCY1A2P33402 732 aa15.26■□□□□ 0.03
NPLOC4-213ENST00000573519 ANKRD45Q5TZF3 282 aa15.26■□□□□ 0.03
NPLOC4-213ENST00000573519 CCAR1Q8IX12 1150 aaKnown RBP15.26■□□□□ 0.03
NPLOC4-213ENST00000573519 GPRC5AQ8NFJ5 357 aa15.26■□□□□ 0.03
NPLOC4-213ENST00000573519 KIAA1683Q9H0B3 1180 aa15.26■□□□□ 0.03
NPLOC4-213ENST00000573519 MYH7P12883 1935 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 USP17L15C9J2P7 530 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 USP17L13C9JLJ4 530 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 USP17L11C9JVI0 530 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 USP17L18D6R9N7 530 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 USP17L22D6RA61 530 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 USP17L17D6RBQ6 530 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 USP17L19D6RCP7 530 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 USP17L20D6RJB6 530 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 SMIM22K7EJ46 135 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 CCL5P13501 91 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 MX1P20591 662 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 USP17L24Q0WX57 530 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 C12orf60Q5U649 245 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 TMEM179Q6ZVK1 233 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 EXOC6Q8TAG9 804 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 APPBP2Q92624 585 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 C12orf42Q96LP6 360 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 FSD1Q9BTV5 496 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 RNF208Q9H0X6 261 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 CWC22Q9HCG8 908 aaKnown RBP15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 TXNRD2Q9NNW7 524 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 MORF4L1Q9UBU8 362 aa15.25■□□□□ 0.03
NPLOC4-213ENST00000573519 CENPFP49454 3210 aa15.24■□□□□ 0.03
NPLOC4-213ENST00000573519 GLRX3O76003 335 aaKnown RBP15.24■□□□□ 0.03
NPLOC4-213ENST00000573519 ZFYP08048 801 aaPredicted RBP15.24■□□□□ 0.03
NPLOC4-213ENST00000573519 AKR1B1P15121 316 aa15.24■□□□□ 0.03
NPLOC4-213ENST00000573519 VCAM1P19320 739 aa15.24■□□□□ 0.03
NPLOC4-213ENST00000573519 CDK8P49336 464 aa15.24■□□□□ 0.03
NPLOC4-213ENST00000573519 IRF5Q13568 498 aa15.24■□□□□ 0.03
NPLOC4-213ENST00000573519 LRRFIP1Q32MZ4 808 aaKnown RBP15.24■□□□□ 0.03
NPLOC4-213ENST00000573519 CTR9Q6PD62 1173 aa15.24■□□□□ 0.03
NPLOC4-213ENST00000573519 STK11IPQ8N1F8 1099 aa15.24■□□□□ 0.03
NPLOC4-213ENST00000573519 PI4K2BQ8TCG2 481 aa15.24■□□□□ 0.03
NPLOC4-213ENST00000573519 OSBP2Q969R2 916 aa15.24■□□□□ 0.03
NPLOC4-213ENST00000573519 STRBPQ96SI9 672 aaKnown RBP15.24■□□□□ 0.03
NPLOC4-213ENST00000573519 RPAP3Q9H6T3 665 aaPredicted RBP15.24■□□□□ 0.03
NPLOC4-213ENST00000573519 RBPJLQ9UBG7 517 aa15.24■□□□□ 0.03
NPLOC4-213ENST00000573519 ARPP21Q9UBL0 812 aaPredicted RBP15.24■□□□□ 0.03
NPLOC4-213ENST00000573519 APPP05067 770 aa15.23■□□□□ 0.03
NPLOC4-213ENST00000573519 INHAP05111 366 aa15.23■□□□□ 0.03
NPLOC4-213ENST00000573519 ERVK-9P63128 1117 aa15.23■□□□□ 0.03
NPLOC4-213ENST00000573519 ERVK-24P63145 666 aa15.23■□□□□ 0.03
NPLOC4-213ENST00000573519 CATSPERGQ6ZRH7 1159 aa15.23■□□□□ 0.03
NPLOC4-213ENST00000573519 CLEC10AQ8IUN9 316 aa15.23■□□□□ 0.03
NPLOC4-213ENST00000573519 PXYLP1Q8TE99 480 aa15.23■□□□□ 0.03
NPLOC4-213ENST00000573519 GTF3C2Q8WUA4 911 aaPredicted RBP15.23■□□□□ 0.03
NPLOC4-213ENST00000573519 GCC1Q96CN9 775 aa15.23■□□□□ 0.03
NPLOC4-213ENST00000573519 UNC93B1Q9H1C4 597 aa15.23■□□□□ 0.03
NPLOC4-213ENST00000573519 ARHGEF10LQ9HCE6 1279 aa15.23■□□□□ 0.03
NPLOC4-213ENST00000573519 BAZ2AQ9UIF9 1905 aaKnown RBP15.22■□□□□ 0.03
NPLOC4-213ENST00000573519 A0A1W2PRG0 241 aa15.22■□□□□ 0.03
NPLOC4-213ENST00000573519 GSG1L2A8MUP6 293 aa15.22■□□□□ 0.03
NPLOC4-213ENST00000573519 MINDY4BA8MYZ0 360 aa15.22■□□□□ 0.03
NPLOC4-213ENST00000573519 M0R2C6 588 aa15.22■□□□□ 0.03
NPLOC4-213ENST00000573519 GPAA1O43292 621 aa15.22■□□□□ 0.03
NPLOC4-213ENST00000573519 TDO2P48775 406 aa15.22■□□□□ 0.03
NPLOC4-213ENST00000573519 ATP2B2Q01814 1243 aa15.22■□□□□ 0.03
NPLOC4-213ENST00000573519 ICA1Q05084 483 aa15.22■□□□□ 0.03
NPLOC4-213ENST00000573519 HDAC1Q13547 482 aaPredicted RBP15.22■□□□□ 0.03
NPLOC4-213ENST00000573519 PRPF38BQ5VTL8 546 aaKnown RBP15.22■□□□□ 0.03
NPLOC4-213ENST00000573519 C16orf86Q6ZW13 317 aa15.22■□□□□ 0.03
NPLOC4-213ENST00000573519 NKX2-3Q8TAU0 364 aa15.22■□□□□ 0.03
NPLOC4-213ENST00000573519 CCDC17Q96LX7 622 aa15.22■□□□□ 0.03
NPLOC4-213ENST00000573519 TANGO6Q9C0B7 1094 aa15.22■□□□□ 0.03
NPLOC4-213ENST00000573519 CYP2B6P20813 491 aa15.21■□□□□ 0.03
NPLOC4-213ENST00000573519 MAPK4P31152 587 aa15.21■□□□□ 0.03
NPLOC4-213ENST00000573519 IRX6P78412 446 aaPredicted RBP15.21■□□□□ 0.03
NPLOC4-213ENST00000573519 Q3C1V9 767 aa15.21■□□□□ 0.03
NPLOC4-213ENST00000573519 WDR78Q5VTH9 848 aa15.21■□□□□ 0.03
NPLOC4-213ENST00000573519 SEC62Q99442 399 aaKnown RBP15.21■□□□□ 0.03
NPLOC4-213ENST00000573519 SH2D4AQ9H788 454 aa15.21■□□□□ 0.03
NPLOC4-213ENST00000573519 RAD21O60216 631 aa15.2■□□□□ 0.02
NPLOC4-213ENST00000573519 GJB1P08034 283 aa15.2■□□□□ 0.02
NPLOC4-213ENST00000573519 GNAT2P19087 354 aa15.2■□□□□ 0.02
NPLOC4-213ENST00000573519 GIMAP6Q6P9H5 292 aa15.2■□□□□ 0.02
NPLOC4-213ENST00000573519 SAMD1Q6SPF0 538 aaPredicted RBP15.2■□□□□ 0.02
NPLOC4-213ENST00000573519 SPICE1Q8N0Z3 855 aa15.2■□□□□ 0.02
NPLOC4-213ENST00000573519 NUDT12Q9BQG2 462 aa15.2■□□□□ 0.02
NPLOC4-213ENST00000573519 PORCNQ9H237 461 aa15.2■□□□□ 0.02
NPLOC4-213ENST00000573519 MKNK2Q9HBH9 465 aa15.2■□□□□ 0.02
NPLOC4-213ENST00000573519 GJD2Q9UKL4 321 aa15.2■□□□□ 0.02
NPLOC4-213ENST00000573519 RABGAP1Q9Y3P9 1069 aa15.2■□□□□ 0.02
NPLOC4-213ENST00000573519 MYH8P13535 1937 aa15.19■□□□□ 0.02
NPLOC4-213ENST00000573519 CNMDO75829 334 aa15.19■□□□□ 0.02
NPLOC4-213ENST00000573519 HMGCRP04035 888 aa15.19■□□□□ 0.02
NPLOC4-213ENST00000573519 GJA8P48165 433 aa15.19■□□□□ 0.02
NPLOC4-213ENST00000573519 CCNA1P78396 465 aa15.19■□□□□ 0.02
NPLOC4-213ENST00000573519 AAMPQ13685 434 aa15.19■□□□□ 0.02
NPLOC4-213ENST00000573519 SBK1Q52WX2 424 aa15.19■□□□□ 0.02
NPLOC4-213ENST00000573519 B4GALNT3Q6L9W6 998 aa15.19■□□□□ 0.02
NPLOC4-213ENST00000573519 POTEEQ6S8J3 1075 aa15.19■□□□□ 0.02
NPLOC4-213ENST00000573519 GPR142Q7Z601 462 aa15.19■□□□□ 0.02
NPLOC4-213ENST00000573519 PLEKHH3Q7Z736 793 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms