RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 CEP290O15078 2479 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 USP17L15C9J2P7 530 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 USP17L13C9JLJ4 530 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 USP17L11C9JVI0 530 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 USP17L18D6R9N7 530 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 USP17L22D6RA61 530 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 USP17L17D6RBQ6 530 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 USP17L19D6RCP7 530 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 USP17L20D6RJB6 530 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 ATP5JP18859 108 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 USP17L24Q0WX57 530 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 PDE3AQ14432 1141 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 ZYXQ15942 572 aaKnown RBP23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 POTEEQ6S8J3 1075 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 SDR42E1Q8WUS8 393 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 TRIB2Q92519 343 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 NUDT12Q9BQG2 462 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 DCP1AQ9NPI6 582 aaPredicted RBP23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 MCM9Q9NXL9 1143 aa23.4■■□□□ 1.34
HCFC1R1-204ENST00000573095 RPTORQ8N122 1335 aa23.39■■□□□ 1.34
HCFC1R1-204ENST00000573095 TFRCP02786 760 aaKnown RBP23.39■■□□□ 1.33
HCFC1R1-204ENST00000573095 XRCC5P13010 732 aaKnown RBP23.39■■□□□ 1.33
HCFC1R1-204ENST00000573095 VCAM1P19320 739 aa23.39■■□□□ 1.33
HCFC1R1-204ENST00000573095 GUCY1A2P33402 732 aa23.39■■□□□ 1.33
HCFC1R1-204ENST00000573095 ACER1Q8TDN7 264 aa23.39■■□□□ 1.33
HCFC1R1-204ENST00000573095 PAGR1Q9BTK6 254 aa23.39■■□□□ 1.33
HCFC1R1-204ENST00000573095 PORCNQ9H237 461 aa23.39■■□□□ 1.33
HCFC1R1-204ENST00000573095 A0A0G2JMZ2 1700 aa23.39■■□□□ 1.33
HCFC1R1-204ENST00000573095 CYP2B6P20813 491 aa23.38■■□□□ 1.33
HCFC1R1-204ENST00000573095 ADD2P35612 726 aa23.38■■□□□ 1.33
HCFC1R1-204ENST00000573095 FXR1P51114 621 aaKnown RBP eCLIP23.38■■□□□ 1.33
HCFC1R1-204ENST00000573095 Q3C1V9 767 aa23.38■■□□□ 1.33
HCFC1R1-204ENST00000573095 MAP3K21Q5TCX8 1036 aa23.38■■□□□ 1.33
HCFC1R1-204ENST00000573095 C20orf194Q5TEA3 1177 aa23.38■■□□□ 1.33
HCFC1R1-204ENST00000573095 ANKLE1Q8NAG6 615 aa23.38■■□□□ 1.33
HCFC1R1-204ENST00000573095 HAUS7Q99871 368 aa23.38■■□□□ 1.33
HCFC1R1-204ENST00000573095 BOLA2Q9H3K6 86 aa23.38■■□□□ 1.33
HCFC1R1-204ENST00000573095 HMX1Q9NP08 348 aaPredicted RBP23.38■■□□□ 1.33
HCFC1R1-204ENST00000573095 RABGAP1Q9Y3P9 1069 aa23.38■■□□□ 1.33
HCFC1R1-204ENST00000573095 EVX2Q03828 476 aa23.37■■□□□ 1.33
HCFC1R1-204ENST00000573095 TRIM32Q13049 653 aa23.37■■□□□ 1.33
HCFC1R1-204ENST00000573095 LBX2Q6XYB7 198 aa23.37■■□□□ 1.33
HCFC1R1-204ENST00000573095 CATSPERGQ6ZRH7 1159 aa23.37■■□□□ 1.33
HCFC1R1-204ENST00000573095 GPR142Q7Z601 462 aa23.37■■□□□ 1.33
HCFC1R1-204ENST00000573095 TRMT44Q8IYL2 757 aaKnown RBP23.37■■□□□ 1.33
HCFC1R1-204ENST00000573095 USP6NLQ92738 828 aa23.37■■□□□ 1.33
HCFC1R1-204ENST00000573095 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.37■■□□□ 1.33
HCFC1R1-204ENST00000573095 BCL11AQ9H165 835 aa23.37■■□□□ 1.33
HCFC1R1-204ENST00000573095 ARMT1Q9H993 441 aa23.37■■□□□ 1.33
HCFC1R1-204ENST00000573095 CNMDO75829 334 aa23.36■■□□□ 1.33
HCFC1R1-204ENST00000573095 MBD4O95243 580 aa23.36■■□□□ 1.33
HCFC1R1-204ENST00000573095 SEPT2Q15019 361 aa23.36■■□□□ 1.33
HCFC1R1-204ENST00000573095 MORN1Q5T089 497 aa23.36■■□□□ 1.33
HCFC1R1-204ENST00000573095 CCAR1Q8IX12 1150 aaKnown RBP23.36■■□□□ 1.33
HCFC1R1-204ENST00000573095 LRRCC1Q9C099 1032 aa23.36■■□□□ 1.33
HCFC1R1-204ENST00000573095 NR2E3Q9Y5X4 410 aa23.36■■□□□ 1.33
HCFC1R1-204ENST00000573095 FRMPD3Q5JV73 1810 aa23.36■■□□□ 1.33
HCFC1R1-204ENST00000573095 ZKSCAN1P17029 563 aaPredicted RBP23.35■■□□□ 1.33
HCFC1R1-204ENST00000573095 RGS2P41220 211 aa23.35■■□□□ 1.33
HCFC1R1-204ENST00000573095 CCNA1P78396 465 aa23.35■■□□□ 1.33
HCFC1R1-204ENST00000573095 CHRDL2Q6WN34 429 aa23.35■■□□□ 1.33
HCFC1R1-204ENST00000573095 PLEKHH3Q7Z736 793 aa23.35■■□□□ 1.33
HCFC1R1-204ENST00000573095 APBA2Q99767 749 aa23.35■■□□□ 1.33
HCFC1R1-204ENST00000573095 ATP8A2Q9NTI2 1148 aa23.35■■□□□ 1.33
HCFC1R1-204ENST00000573095 SWAP70Q9UH65 585 aa23.35■■□□□ 1.33
HCFC1R1-204ENST00000573095 ZNF236Q9UL36 1845 aa23.35■■□□□ 1.33
HCFC1R1-204ENST00000573095 RLFQ13129 1914 aa23.35■■□□□ 1.33
HCFC1R1-204ENST00000573095 CYP2D6P10635 497 aa23.34■■□□□ 1.33
HCFC1R1-204ENST00000573095 PRKAR2AP13861 404 aaKnown RBP23.34■■□□□ 1.33
HCFC1R1-204ENST00000573095 UBE3CQ15386 1083 aa23.34■■□□□ 1.33
HCFC1R1-204ENST00000573095 PAWRQ96IZ0 340 aaKnown RBP23.34■■□□□ 1.33
HCFC1R1-204ENST00000573095 RPAP3Q9H6T3 665 aaPredicted RBP23.34■■□□□ 1.33
HCFC1R1-204ENST00000573095 PARP14Q460N5 1801 aa23.33■■□□□ 1.33
HCFC1R1-204ENST00000573095 SPDYE16A6NNV3 312 aaPredicted RBP23.33■■□□□ 1.33
HCFC1R1-204ENST00000573095 SLFNL1Q499Z3 407 aa23.33■■□□□ 1.33
HCFC1R1-204ENST00000573095 TMEM179Q6ZVK1 233 aa23.33■■□□□ 1.33
HCFC1R1-204ENST00000573095 NECAB2Q7Z6G3 386 aa23.33■■□□□ 1.33
HCFC1R1-204ENST00000573095 SLC44A5Q8NCS7 719 aa23.33■■□□□ 1.33
HCFC1R1-204ENST00000573095 DIS3LQ8TF46 1054 aaKnown RBP23.33■■□□□ 1.33
HCFC1R1-204ENST00000573095 TRIOBPQ9H2D6 2365 aa23.32■■□□□ 1.32
HCFC1R1-204ENST00000573095 A0A1W2PRG0 241 aa23.32■■□□□ 1.32
HCFC1R1-204ENST00000573095 MPHOSPH10O00566 681 aaKnown RBP23.32■■□□□ 1.32
HCFC1R1-204ENST00000573095 PRKAB2O43741 272 aa23.32■■□□□ 1.32
HCFC1R1-204ENST00000573095 OGDHLQ9ULD0 1010 aa23.32■■□□□ 1.32
HCFC1R1-204ENST00000573095 EVI5O60447 810 aa23.31■■□□□ 1.32
HCFC1R1-204ENST00000573095 MAP2K5Q13163 448 aa23.31■■□□□ 1.32
HCFC1R1-204ENST00000573095 PRO3102Q9H379 93 aa23.31■■□□□ 1.32
HCFC1R1-204ENST00000573095 CWC22Q9HCG8 908 aaKnown RBP23.31■■□□□ 1.32
HCFC1R1-204ENST00000573095 BTBD7Q9P203 1132 aa23.31■■□□□ 1.32
HCFC1R1-204ENST00000573095 GLRX3O76003 335 aaKnown RBP23.3■■□□□ 1.32
HCFC1R1-204ENST00000573095 CHGBP05060 677 aa23.3■■□□□ 1.32
HCFC1R1-204ENST00000573095 MNX1P50219 401 aaPredicted RBP23.3■■□□□ 1.32
HCFC1R1-204ENST00000573095 CCL14Q16627 93 aa23.3■■□□□ 1.32
HCFC1R1-204ENST00000573095 ZSCAN25Q6NSZ9 544 aa23.3■■□□□ 1.32
HCFC1R1-204ENST00000573095 DYNLL2Q96FJ2 89 aa23.3■■□□□ 1.32
HCFC1R1-204ENST00000573095 RBM27Q9P2N5 1060 aaKnown RBP23.3■■□□□ 1.32
HCFC1R1-204ENST00000573095 GREB1LQ9C091 1923 aaPredicted RBP23.29■■□□□ 1.32
HCFC1R1-204ENST00000573095 SMARCA5O60264 1052 aaPredicted RBP23.29■■□□□ 1.32
HCFC1R1-204ENST00000573095 CACNB2Q08289 660 aaPredicted RBP23.29■■□□□ 1.32
HCFC1R1-204ENST00000573095 C12orf60Q5U649 245 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms