RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 FBXO10Q9UK96 956 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 CEP131Q9UPN4 1083 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 GIT1Q9Y2X7 761 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 PCDHGB3Q9Y5G1 929 aa5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 LRRFIP2Q9Y608 721 aaKnown RBP5.95□□□□□ -1.46
TOPBP1-210ENST00000572787 hCG_1642624A0A1W2PR95 340 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 B2RBV5 119 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 TLR5O60602 858 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 BAIAP3O94812 1187 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 PF4V1P10720 104 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 ZKSCAN1P17029 563 aaPredicted RBP5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 HOXC13P31276 330 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 ECE1P42892 770 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 TDO2P48775 406 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 LIG3P49916 1009 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 WNT7BP56706 349 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 ROR1Q01973 937 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 DCTN1Q14203 1278 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 GRM2Q14416 872 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 TBCELQ5QJ74 424 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 INTS11Q5TA45 600 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 DUSP27Q5VZP5 1158 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 ZNF787Q6DD87 383 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 FAAH2Q6GMR7 532 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 POTEAQ6S8J7 498 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 XKR5Q6UX68 686 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 NYAP1Q6ZVC0 841 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 EPM2AIP1Q7L775 607 aaPredicted RBP5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 NLRP8Q86W28 1048 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 ANKRD13BQ86YJ7 626 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 REXO1Q8N1G1 1221 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 C3orf58Q8NDZ4 430 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 KISS1RQ969F8 398 aaPredicted RBP5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 GCC1Q96CN9 775 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 NGLY1Q96IV0 654 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 CLUHP3Q96NS8 147 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 NELL2Q99435 816 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 MENTQ9BUN1 341 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 MRPL4Q9BYD3 311 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 UNC45AQ9H3U1 944 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 OSGEPQ9NPF4 335 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 TBC1D22BQ9NU19 505 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 TPCN1Q9ULQ1 816 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 ZNRF3Q9ULT6 936 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 TRAK1Q9UPV9 953 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 PARP3Q9Y6F1 533 aa5.94□□□□□ -1.46
TOPBP1-210ENST00000572787 ACTN4O43707 911 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 MBD4O95243 580 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 SDSP20132 328 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 POU3F2P20265 443 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 CAPN3P20807 821 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 LPOP22079 712 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 RPS6KB1P23443 525 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 ADD2P35612 726 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 CAP2P40123 477 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 GRK6P43250 576 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 ALDH5A1P51649 535 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 KRT83P78385 493 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 TMPRSS15P98073 1019 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 PFKPQ01813 784 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 CCDC158Q5M9N0 1113 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 CYB5RLQ6IPT4 315 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 SWSAP1Q6NVH7 229 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 FAM180BQ6P0A1 224 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 C4orf50Q6ZRC1 276 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 C11orf74Q86VG3 221 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 LSRQ86X29 649 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 TREML1Q86YW5 311 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 BRSK2Q8IWQ3 736 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 GALNT12Q8IXK2 581 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 ARL6IP6Q8N6S5 226 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 AFAP1L1Q8TED9 768 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 ZBTB10Q96DT7 871 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 AIFM3Q96NN9 605 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 IPO9Q96P70 1041 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 TTC1Q99614 292 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 SLC13A1Q9BZW2 595 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 EPN3Q9H201 632 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 TSPY26PQ9H489 355 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 SMYD2Q9NRG4 433 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 KIAA1468Q9P260 1216 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 ANKIB1Q9P2G1 1089 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 SAP30BPQ9UHR5 308 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 ZBTB21Q9ULJ3 1066 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 TLR6Q9Y2C9 796 aa5.93□□□□□ -1.46
TOPBP1-210ENST00000572787 ZEB2O60315 1214 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 PHACTR2O75167 634 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 ZPR1O75312 459 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 MAP3K6O95382 1288 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 IFIT1P09914 478 aaKnown RBP5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 VCAM1P19320 739 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 UBA7P41226 1012 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 RAD52P43351 418 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 STT3AP46977 705 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 HIRAP54198 1017 aaPredicted RBP5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 MTA1Q13330 715 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 GALEQ14376 348 aa5.92□□□□□ -1.46
TOPBP1-210ENST00000572787 CWF19L2Q2TBE0 894 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms