RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 SLAIN1Q8ND83 568 aa36.48■■■■□ 3.43
CTDNEP1-206ENST00000571409 BIN2Q9UBW5 565 aaPredicted RBP36.48■■■■□ 3.43
CTDNEP1-206ENST00000571409 KIAA0100Q14667 2235 aaKnown RBP36.47■■■■□ 3.43
CTDNEP1-206ENST00000571409 PI4K2BQ8TCG2 481 aa36.47■■■■□ 3.43
CTDNEP1-206ENST00000571409 APPBP2Q92624 585 aa36.47■■■■□ 3.43
CTDNEP1-206ENST00000571409 RNF113AO15541 343 aaKnown RBP36.46■■■■□ 3.43
CTDNEP1-206ENST00000571409 ADCY3O60266 1144 aa36.46■■■■□ 3.43
CTDNEP1-206ENST00000571409 OSBP2Q969R2 916 aa36.46■■■■□ 3.43
CTDNEP1-206ENST00000571409 STRBPQ96SI9 672 aaKnown RBP36.46■■■■□ 3.43
CTDNEP1-206ENST00000571409 SMIM22K7EJ46 135 aa36.45■■■■□ 3.43
CTDNEP1-206ENST00000571409 GLRX3O76003 335 aaKnown RBP36.45■■■■□ 3.43
CTDNEP1-206ENST00000571409 ZFYP08048 801 aaPredicted RBP36.45■■■■□ 3.43
CTDNEP1-206ENST00000571409 IRF5Q13568 498 aa36.45■■■■□ 3.43
CTDNEP1-206ENST00000571409 TXNRD2Q9NNW7 524 aa36.45■■■■□ 3.43
CTDNEP1-206ENST00000571409 ZBTB47Q9UFB7 747 aaPredicted RBP36.45■■■■□ 3.43
CTDNEP1-206ENST00000571409 BRCA2P51587 3418 aa36.45■■■■□ 3.43
CTDNEP1-206ENST00000571409 PEX10O60683 326 aa36.44■■■■□ 3.42
CTDNEP1-206ENST00000571409 MX1P20591 662 aa36.44■■■■□ 3.42
CTDNEP1-206ENST00000571409 UBXN2AP68543 259 aa36.44■■■■□ 3.42
CTDNEP1-206ENST00000571409 HDAC1Q13547 482 aaPredicted RBP36.44■■■■□ 3.42
CTDNEP1-206ENST00000571409 ANKRD45Q5TZF3 282 aa36.44■■■■□ 3.42
CTDNEP1-206ENST00000571409 CTR9Q6PD62 1173 aa36.44■■■■□ 3.42
CTDNEP1-206ENST00000571409 DOCK3Q8IZD9 2030 aa36.43■■■■□ 3.42
CTDNEP1-206ENST00000571409 USP17L15C9J2P7 530 aa36.43■■■■□ 3.42
CTDNEP1-206ENST00000571409 USP17L13C9JLJ4 530 aa36.43■■■■□ 3.42
CTDNEP1-206ENST00000571409 USP17L11C9JVI0 530 aa36.43■■■■□ 3.42
CTDNEP1-206ENST00000571409 USP17L18D6R9N7 530 aa36.43■■■■□ 3.42
CTDNEP1-206ENST00000571409 USP17L22D6RA61 530 aa36.43■■■■□ 3.42
CTDNEP1-206ENST00000571409 USP17L17D6RBQ6 530 aa36.43■■■■□ 3.42
CTDNEP1-206ENST00000571409 USP17L19D6RCP7 530 aa36.43■■■■□ 3.42
CTDNEP1-206ENST00000571409 USP17L20D6RJB6 530 aa36.43■■■■□ 3.42
CTDNEP1-206ENST00000571409 VCAM1P19320 739 aa36.43■■■■□ 3.42
CTDNEP1-206ENST00000571409 USP17L24Q0WX57 530 aa36.43■■■■□ 3.42
CTDNEP1-206ENST00000571409 TMEM179Q6ZVK1 233 aa36.43■■■■□ 3.42
CTDNEP1-206ENST00000571409 GTF3C2Q8WUA4 911 aaPredicted RBP36.43■■■■□ 3.42
CTDNEP1-206ENST00000571409 ELNP15502 786 aa36.42■■■■□ 3.42
CTDNEP1-206ENST00000571409 CDK8P49336 464 aa36.42■■■■□ 3.42
CTDNEP1-206ENST00000571409 LRRFIP1Q32MZ4 808 aaKnown RBP36.42■■■■□ 3.42
CTDNEP1-206ENST00000571409 C16orf86Q6ZW13 317 aa36.42■■■■□ 3.42
CTDNEP1-206ENST00000571409 GPRC5AQ8NFJ5 357 aa36.42■■■■□ 3.42
CTDNEP1-206ENST00000571409 PXYLP1Q8TE99 480 aa36.42■■■■□ 3.42
CTDNEP1-206ENST00000571409 GCC1Q96CN9 775 aa36.42■■■■□ 3.42
CTDNEP1-206ENST00000571409 RBPJLQ9UBG7 517 aa36.42■■■■□ 3.42
CTDNEP1-206ENST00000571409 AKR1B1P15121 316 aa36.41■■■■□ 3.42
CTDNEP1-206ENST00000571409 PAGR1Q9BTK6 254 aa36.41■■■■□ 3.42
CTDNEP1-206ENST00000571409 ARPP21Q9UBL0 812 aaPredicted RBP36.41■■■■□ 3.42
CTDNEP1-206ENST00000571409 SALL3Q9BXA9 1300 aa36.4■■■■□ 3.42
CTDNEP1-206ENST00000571409 A0A1W2PRG0 241 aa36.4■■■■□ 3.42
CTDNEP1-206ENST00000571409 CCL5P13501 91 aa36.4■■■■□ 3.42
CTDNEP1-206ENST00000571409 CATSPERGQ6ZRH7 1159 aa36.4■■■■□ 3.42
CTDNEP1-206ENST00000571409 GSG1L2A8MUP6 293 aa36.39■■■■□ 3.42
CTDNEP1-206ENST00000571409 ERVK-9P63128 1117 aa36.39■■■■□ 3.42
CTDNEP1-206ENST00000571409 ERVK-24P63145 666 aa36.39■■■■□ 3.42
CTDNEP1-206ENST00000571409 AAMPQ13685 434 aa36.39■■■■□ 3.42
CTDNEP1-206ENST00000571409 CCDC17Q96LX7 622 aa36.39■■■■□ 3.42
CTDNEP1-206ENST00000571409 M0R2C6 588 aa36.38■■■■□ 3.41
CTDNEP1-206ENST00000571409 GPAA1O43292 621 aa36.38■■■■□ 3.41
CTDNEP1-206ENST00000571409 PDE4DIPQ5VU43 2346 aa36.38■■■■□ 3.41
CTDNEP1-206ENST00000571409 POTEEQ6S8J3 1075 aa36.38■■■■□ 3.41
CTDNEP1-206ENST00000571409 FSD1Q9BTV5 496 aa36.38■■■■□ 3.41
CTDNEP1-206ENST00000571409 RNF208Q9H0X6 261 aa36.38■■■■□ 3.41
CTDNEP1-206ENST00000571409 RPAP3Q9H6T3 665 aaPredicted RBP36.38■■■■□ 3.41
CTDNEP1-206ENST00000571409 Q3C1V9 767 aa36.37■■■■□ 3.41
CTDNEP1-206ENST00000571409 GIMAP6Q6P9H5 292 aa36.37■■■■□ 3.41
CTDNEP1-206ENST00000571409 CLEC10AQ8IUN9 316 aa36.37■■■■□ 3.41
CTDNEP1-206ENST00000571409 GJD2Q9UKL4 321 aa36.37■■■■□ 3.41
CTDNEP1-206ENST00000571409 INHAP05111 366 aa36.36■■■■□ 3.41
CTDNEP1-206ENST00000571409 ICA1Q05084 483 aa36.36■■■■□ 3.41
CTDNEP1-206ENST00000571409 SBK1Q52WX2 424 aa36.36■■■■□ 3.41
CTDNEP1-206ENST00000571409 ARHGEF10LQ9HCE6 1279 aa36.36■■■■□ 3.41
CTDNEP1-206ENST00000571409 PLXNB2O15031 1838 aa36.36■■■■□ 3.41
CTDNEP1-206ENST00000571409 GNAT2P19087 354 aa36.35■■■■□ 3.41
CTDNEP1-206ENST00000571409 UNC93B1Q9H1C4 597 aa36.35■■■■□ 3.41
CTDNEP1-206ENST00000571409 PRPF38BQ5VTL8 546 aaKnown RBP36.34■■■■□ 3.41
CTDNEP1-206ENST00000571409 NKX2-3Q8TAU0 364 aa36.34■■■■□ 3.41
CTDNEP1-206ENST00000571409 SHISA4Q96DD7 197 aa36.34■■■■□ 3.41
CTDNEP1-206ENST00000571409 RABGAP1Q9Y3P9 1069 aa36.34■■■■□ 3.41
CTDNEP1-206ENST00000571409 GJB1P08034 283 aa36.33■■■■□ 3.41
CTDNEP1-206ENST00000571409 MAPK4P31152 587 aa36.33■■■■□ 3.41
CTDNEP1-206ENST00000571409 SIAH1Q8IUQ4 282 aa36.33■■■■□ 3.41
CTDNEP1-206ENST00000571409 CCAR1Q8IX12 1150 aaKnown RBP36.33■■■■□ 3.41
CTDNEP1-206ENST00000571409 SEC62Q99442 399 aaKnown RBP36.33■■■■□ 3.41
CTDNEP1-206ENST00000571409 PORCNQ9H237 461 aa36.33■■■■□ 3.41
CTDNEP1-206ENST00000571409 EPB41L4AQ9HCS5 686 aaPredicted RBP36.33■■■■□ 3.41
CTDNEP1-206ENST00000571409 MINDY4BA8MYZ0 360 aa36.32■■■■□ 3.4
CTDNEP1-206ENST00000571409 CNMDO75829 334 aa36.32■■■■□ 3.4
CTDNEP1-206ENST00000571409 MKI67P46013 3256 aaKnown RBP36.31■■■■□ 3.4
CTDNEP1-206ENST00000571409 APPP05067 770 aa36.31■■■■□ 3.4
CTDNEP1-206ENST00000571409 GJA8P48165 433 aa36.31■■■■□ 3.4
CTDNEP1-206ENST00000571409 TDO2P48775 406 aa36.31■■■■□ 3.4
CTDNEP1-206ENST00000571409 LBX2Q6XYB7 198 aa36.31■■■■□ 3.4
CTDNEP1-206ENST00000571409 STK11IPQ8N1F8 1099 aa36.31■■■■□ 3.4
CTDNEP1-206ENST00000571409 SH2D4AQ9H788 454 aa36.31■■■■□ 3.4
CTDNEP1-206ENST00000571409 STAP2Q9UGK3 403 aa36.31■■■■□ 3.4
CTDNEP1-206ENST00000571409 TMX2Q9Y320 296 aa36.31■■■■□ 3.4
CTDNEP1-206ENST00000571409 SPDYE16A6NNV3 312 aaPredicted RBP36.3■■■■□ 3.4
CTDNEP1-206ENST00000571409 KIAA1755Q5JYT7 1200 aa36.3■■■■□ 3.4
CTDNEP1-206ENST00000571409 ZMYM1Q5SVZ6 1142 aa36.3■■■■□ 3.4
CTDNEP1-206ENST00000571409 EXOC6Q8TAG9 804 aa36.3■■■■□ 3.4
CTDNEP1-206ENST00000571409 NUDT12Q9BQG2 462 aa36.3■■■■□ 3.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms