RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 EAPPQ56P03 285 aaPredicted RBP13.94□□□□□ -0.18
CDRT1-206ENST00000571263 NBPF12Q5TAG4 269 aaPredicted RBP13.94□□□□□ -0.18
CDRT1-206ENST00000571263 NOL8Q76FK4 1167 aaKnown RBP13.94□□□□□ -0.18
CDRT1-206ENST00000571263 USP48Q86UV5 1035 aa13.94□□□□□ -0.18
CDRT1-206ENST00000571263 ZNF654Q8IZM8 581 aa13.94□□□□□ -0.18
CDRT1-206ENST00000571263 GTF3C6Q969F1 213 aa13.94□□□□□ -0.18
CDRT1-206ENST00000571263 MKL1Q969V6 931 aa13.94□□□□□ -0.18
CDRT1-206ENST00000571263 SH2D4AQ9H788 454 aa13.94□□□□□ -0.18
CDRT1-206ENST00000571263 RRAGCQ9HB90 399 aa13.94□□□□□ -0.18
CDRT1-206ENST00000571263 RBM28Q9NW13 759 aaKnown RBP13.94□□□□□ -0.18
CDRT1-206ENST00000571263 NAP1L2Q9ULW6 460 aaPredicted RBP13.94□□□□□ -0.18
CDRT1-206ENST00000571263 STX8Q9UNK0 236 aa13.94□□□□□ -0.18
CDRT1-206ENST00000571263 CLEC11AQ9Y240 323 aa13.94□□□□□ -0.18
CDRT1-206ENST00000571263 NID2Q14112 1375 aa13.94□□□□□ -0.18
CDRT1-206ENST00000571263 UNCXA6NJT0 531 aa13.93□□□□□ -0.18
CDRT1-206ENST00000571263 GOLGA8BA8MQT2 603 aa13.93□□□□□ -0.18
CDRT1-206ENST00000571263 CPLX1O14810 134 aa13.93□□□□□ -0.18
CDRT1-206ENST00000571263 KIF5BP33176 963 aa13.93□□□□□ -0.18
CDRT1-206ENST00000571263 GNAQP50148 359 aa13.93□□□□□ -0.18
CDRT1-206ENST00000571263 HMGN5P82970 282 aaKnown RBP13.93□□□□□ -0.18
CDRT1-206ENST00000571263 COL9A3Q14050 684 aaPredicted RBP13.93□□□□□ -0.18
CDRT1-206ENST00000571263 RCSD1Q6JBY9 416 aa13.93□□□□□ -0.18
CDRT1-206ENST00000571263 MIGA2Q7L4E1 593 aa13.93□□□□□ -0.18
CDRT1-206ENST00000571263 LDHDQ86WU2 507 aa13.93□□□□□ -0.18
CDRT1-206ENST00000571263 FANCBQ8NB91 859 aa13.93□□□□□ -0.18
CDRT1-206ENST00000571263 CTCFLQ8NI51 663 aaPredicted RBP13.93□□□□□ -0.18
CDRT1-206ENST00000571263 CEP95Q96GE4 821 aa13.93□□□□□ -0.18
CDRT1-206ENST00000571263 LZTS2Q9BRK4 669 aa13.93□□□□□ -0.18
CDRT1-206ENST00000571263 ARHGEF10LQ9HCE6 1279 aa13.93□□□□□ -0.18
CDRT1-206ENST00000571263 ZNF112Q9UJU3 913 aa13.93□□□□□ -0.18
CDRT1-206ENST00000571263 BRPF3Q9ULD4 1205 aa13.93□□□□□ -0.18
CDRT1-206ENST00000571263 PHF20L1A8MW92 1017 aa13.92□□□□□ -0.18
CDRT1-206ENST00000571263 TROAPQ12815 778 aa13.92□□□□□ -0.18
CDRT1-206ENST00000571263 PNMA1Q8ND90 353 aa13.92□□□□□ -0.18
CDRT1-206ENST00000571263 RGS22Q8NE09 1264 aa13.92□□□□□ -0.18
CDRT1-206ENST00000571263 NKX2-3Q8TAU0 364 aa13.92□□□□□ -0.18
CDRT1-206ENST00000571263 TMEM47Q9BQJ4 181 aa13.92□□□□□ -0.18
CDRT1-206ENST00000571263 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDRT1-206ENST00000571263 SMC3Q9UQE7 1217 aa13.92□□□□□ -0.18
CDRT1-206ENST00000571263 SIPA1L1O43166 1804 aa13.92□□□□□ -0.18
CDRT1-206ENST00000571263 MYH8P13535 1937 aa13.92□□□□□ -0.18
CDRT1-206ENST00000571263 GOLGA8AA7E2F4 631 aa13.91□□□□□ -0.18
CDRT1-206ENST00000571263 GH2P01242 217 aa13.91□□□□□ -0.18
CDRT1-206ENST00000571263 PDCP20941 246 aa13.91□□□□□ -0.18
CDRT1-206ENST00000571263 SMARCA1P28370 1054 aa13.91□□□□□ -0.18
CDRT1-206ENST00000571263 IREB2P48200 963 aaKnown RBP13.91□□□□□ -0.18
CDRT1-206ENST00000571263 ICA1Q05084 483 aa13.91□□□□□ -0.18
CDRT1-206ENST00000571263 SCRN1Q12765 414 aa13.91□□□□□ -0.18
CDRT1-206ENST00000571263 RTN1Q16799 776 aa13.91□□□□□ -0.18
CDRT1-206ENST00000571263 CCDC83Q8IWF9 413 aa13.91□□□□□ -0.18
CDRT1-206ENST00000571263 KLRG1Q96E93 195 aa13.91□□□□□ -0.18
CDRT1-206ENST00000571263 LARP6Q9BRS8 491 aaKnown RBP13.91□□□□□ -0.18
CDRT1-206ENST00000571263 AS3MTQ9HBK9 375 aa13.91□□□□□ -0.18
CDRT1-206ENST00000571263 GPHNQ9NQX3 736 aaPredicted RBP13.91□□□□□ -0.18
CDRT1-206ENST00000571263 RBM27Q9P2N5 1060 aaKnown RBP13.91□□□□□ -0.18
CDRT1-206ENST00000571263 CLIP2Q9UDT6 1046 aa13.91□□□□□ -0.18
CDRT1-206ENST00000571263 ZBTB21Q9ULJ3 1066 aa13.91□□□□□ -0.18
CDRT1-206ENST00000571263 CIZ1Q9ULV3 898 aaPredicted RBP13.91□□□□□ -0.18
CDRT1-206ENST00000571263 FAM196BA6NMK8 535 aa13.9□□□□□ -0.18
CDRT1-206ENST00000571263 NMT2O60551 498 aa13.9□□□□□ -0.18
CDRT1-206ENST00000571263 STK3Q13188 491 aa13.9□□□□□ -0.18
CDRT1-206ENST00000571263 SEPT2Q15019 361 aa13.9□□□□□ -0.18
CDRT1-206ENST00000571263 RAB3GAP1Q15042 981 aa13.9□□□□□ -0.18
CDRT1-206ENST00000571263 MICU3Q86XE3 530 aa13.9□□□□□ -0.18
CDRT1-206ENST00000571263 NUP133Q8WUM0 1156 aa13.9□□□□□ -0.18
CDRT1-206ENST00000571263 PICK1Q9NRD5 415 aa13.9□□□□□ -0.18
CDRT1-206ENST00000571263 HPS5Q9UPZ3 1129 aa13.9□□□□□ -0.18
CDRT1-206ENST00000571263 GDF11O95390 407 aa13.89□□□□□ -0.19
CDRT1-206ENST00000571263 LARGE1O95461 756 aa13.89□□□□□ -0.19
CDRT1-206ENST00000571263 EEF2P13639 858 aaKnown RBP13.89□□□□□ -0.19
CDRT1-206ENST00000571263 SLC4A3P48751 1232 aa13.89□□□□□ -0.19
CDRT1-206ENST00000571263 FKBP1BP68106 108 aa13.89□□□□□ -0.19
CDRT1-206ENST00000571263 CCT2P78371 535 aaKnown RBP13.89□□□□□ -0.19
CDRT1-206ENST00000571263 MAP3K9P80192 1104 aa13.89□□□□□ -0.19
CDRT1-206ENST00000571263 MAP3K11Q16584 847 aa13.89□□□□□ -0.19
CDRT1-206ENST00000571263 NOL9Q5SY16 702 aaKnown RBP13.89□□□□□ -0.19
CDRT1-206ENST00000571263 GPATCH4Q5T3I0 446 aaKnown RBP13.89□□□□□ -0.19
CDRT1-206ENST00000571263 ARMC9Q7Z3E5 817 aa13.89□□□□□ -0.19
CDRT1-206ENST00000571263 TRIM22Q8IYM9 498 aa13.89□□□□□ -0.19
CDRT1-206ENST00000571263 SCYL3Q8IZE3 742 aa13.89□□□□□ -0.19
CDRT1-206ENST00000571263 NECAB1Q8N987 351 aa13.89□□□□□ -0.19
CDRT1-206ENST00000571263 GMCL1P1Q8NEA9 526 aa13.89□□□□□ -0.19
CDRT1-206ENST00000571263 WASF1Q92558 559 aa13.89□□□□□ -0.19
CDRT1-206ENST00000571263 CDCA5Q96FF9 252 aa13.89□□□□□ -0.19
CDRT1-206ENST00000571263 SENP2Q9HC62 589 aa13.89□□□□□ -0.19
CDRT1-206ENST00000571263 GREB1LQ9C091 1923 aaPredicted RBP13.88□□□□□ -0.19
CDRT1-206ENST00000571263 USP17L5A8MUK1 530 aa13.88□□□□□ -0.19
CDRT1-206ENST00000571263 ADM5C9JUS6 153 aa13.88□□□□□ -0.19
CDRT1-206ENST00000571263 USP2O75604 605 aaPredicted RBP13.88□□□□□ -0.19
CDRT1-206ENST00000571263 PARP1P09874 1014 aaKnown RBP13.88□□□□□ -0.19
CDRT1-206ENST00000571263 IFNAR1P17181 557 aa13.88□□□□□ -0.19
CDRT1-206ENST00000571263 GUCY1A2P33402 732 aa13.88□□□□□ -0.19
CDRT1-206ENST00000571263 NUCB2P80303 420 aa13.88□□□□□ -0.19
CDRT1-206ENST00000571263 AKAP17AQ02040 695 aaKnown RBP13.88□□□□□ -0.19
CDRT1-206ENST00000571263 GRM4Q14833 912 aa13.88□□□□□ -0.19
CDRT1-206ENST00000571263 ASPRV1Q53RT3 343 aa13.88□□□□□ -0.19
CDRT1-206ENST00000571263 CDAN1Q8IWY9 1227 aa13.88□□□□□ -0.19
CDRT1-206ENST00000571263 FAM184AQ8NB25 1140 aa13.88□□□□□ -0.19
CDRT1-206ENST00000571263 SMARCC2Q8TAQ2 1214 aa13.88□□□□□ -0.19
CDRT1-206ENST00000571263 DCAF4Q8WV16 495 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms