RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 GAKO14976 1311 aa16.03■□□□□ 0.16
CCDC40-205ENST00000571028 POTEB2H3BUK9 544 aa16.03■□□□□ 0.16
CCDC40-205ENST00000571028 SLURP2P0DP57 97 aa16.03■□□□□ 0.16
CCDC40-205ENST00000571028 BTDP43251 543 aa16.03■□□□□ 0.16
CCDC40-205ENST00000571028 LRRC26Q2I0M4 334 aa16.03■□□□□ 0.16
CCDC40-205ENST00000571028 SLC9C2Q5TAH2 1124 aa16.03■□□□□ 0.16
CCDC40-205ENST00000571028 MAP3K21Q5TCX8 1036 aa16.03■□□□□ 0.16
CCDC40-205ENST00000571028 RILPL2Q969X0 211 aa16.03■□□□□ 0.16
CCDC40-205ENST00000571028 NOL10Q9BSC4 688 aaKnown RBP16.03■□□□□ 0.16
CCDC40-205ENST00000571028 AS3MTQ9HBK9 375 aa16.03■□□□□ 0.16
CCDC40-205ENST00000571028 RFX7Q2KHR2 1363 aa16.02■□□□□ 0.16
CCDC40-205ENST00000571028 DOCK1Q14185 1865 aa16.02■□□□□ 0.16
CCDC40-205ENST00000571028 CHGBP05060 677 aa16.02■□□□□ 0.16
CCDC40-205ENST00000571028 PDE6AP16499 860 aa16.02■□□□□ 0.16
CCDC40-205ENST00000571028 ADGRA1Q86SQ6 560 aa16.02■□□□□ 0.16
CCDC40-205ENST00000571028 MIGA1Q8NAN2 632 aa16.02■□□□□ 0.16
CCDC40-205ENST00000571028 FSD1Q9BTV5 496 aa16.02■□□□□ 0.16
CCDC40-205ENST00000571028 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.02■□□□□ 0.16
CCDC40-205ENST00000571028 DDX4Q9NQI0 724 aaKnown RBP16.02■□□□□ 0.16
CCDC40-205ENST00000571028 TMOD4Q9NZQ9 345 aa16.02■□□□□ 0.16
CCDC40-205ENST00000571028 MORF4L1Q9UBU8 362 aa16.02■□□□□ 0.16
CCDC40-205ENST00000571028 ZNF532Q9HCE3 1301 aa16.01■□□□□ 0.15
CCDC40-205ENST00000571028 FAM196BA6NMK8 535 aa16.01■□□□□ 0.15
CCDC40-205ENST00000571028 USP17L5A8MUK1 530 aa16.01■□□□□ 0.15
CCDC40-205ENST00000571028 TBC1D12O60347 775 aa16.01■□□□□ 0.15
CCDC40-205ENST00000571028 COL6A1P12109 1028 aa16.01■□□□□ 0.15
CCDC40-205ENST00000571028 XRCC5P13010 732 aaKnown RBP16.01■□□□□ 0.15
CCDC40-205ENST00000571028 GPRC5AQ8NFJ5 357 aa16.01■□□□□ 0.15
CCDC40-205ENST00000571028 MAFAQ8NHW3 353 aaPredicted RBP16.01■□□□□ 0.15
CCDC40-205ENST00000571028 PRDM6Q9NQX0 595 aa16.01■□□□□ 0.15
CCDC40-205ENST00000571028 AATFQ9NY61 560 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCDC40-205ENST00000571028 MAPK4P31152 587 aa16■□□□□ 0.15
CCDC40-205ENST00000571028 RGS2P41220 211 aa16■□□□□ 0.15
CCDC40-205ENST00000571028 DYNLL1P63167 89 aaKnown RBP16■□□□□ 0.15
CCDC40-205ENST00000571028 CACNB2Q08289 660 aaPredicted RBP16■□□□□ 0.15
CCDC40-205ENST00000571028 KBTBD3Q8NAB2 608 aa16■□□□□ 0.15
CCDC40-205ENST00000571028 GPR75-ASB3A0A0A6YYF3 556 aa15.99■□□□□ 0.15
CCDC40-205ENST00000571028 BAG3O95817 575 aa15.99■□□□□ 0.15
CCDC40-205ENST00000571028 CCND3P30281 292 aaPredicted RBP15.99■□□□□ 0.15
CCDC40-205ENST00000571028 ZSCAN25Q6NSZ9 544 aa15.99■□□□□ 0.15
CCDC40-205ENST00000571028 SH3RF3Q8TEJ3 882 aaPredicted RBP15.99■□□□□ 0.15
CCDC40-205ENST00000571028 FAM163AQ96GL9 167 aaPredicted RBP15.99■□□□□ 0.15
CCDC40-205ENST00000571028 SENP6Q9GZR1 1112 aaPredicted RBP15.99■□□□□ 0.15
CCDC40-205ENST00000571028 ADD2P35612 726 aa15.98■□□□□ 0.15
CCDC40-205ENST00000571028 CAP2P40123 477 aa15.98■□□□□ 0.15
CCDC40-205ENST00000571028 MTMR2Q13614 643 aa15.98■□□□□ 0.15
CCDC40-205ENST00000571028 SH3D19Q5HYK7 790 aa15.98■□□□□ 0.15
CCDC40-205ENST00000571028 TEX11Q8IYF3 940 aa15.98■□□□□ 0.15
CCDC40-205ENST00000571028 SYMPKQ92797 1274 aaKnown RBP15.98■□□□□ 0.15
CCDC40-205ENST00000571028 EVI5LQ96CN4 794 aa15.98■□□□□ 0.15
CCDC40-205ENST00000571028 CDX2Q99626 313 aaPredicted RBP15.98■□□□□ 0.15
CCDC40-205ENST00000571028 APBA2Q99767 749 aa15.98■□□□□ 0.15
CCDC40-205ENST00000571028 OSBPL3Q9H4L5 887 aa15.98■□□□□ 0.15
CCDC40-205ENST00000571028 PTPRFP10586 1907 aa15.98■□□□□ 0.15
CCDC40-205ENST00000571028 MAGEB6P1A0A0J9YX57 407 aa15.97■□□□□ 0.15
CCDC40-205ENST00000571028 RNF113AO15541 343 aaKnown RBP15.97■□□□□ 0.15
CCDC40-205ENST00000571028 HERVK_113P62684 666 aa15.97■□□□□ 0.15
CCDC40-205ENST00000571028 TTC22Q5TAA0 569 aa15.97■□□□□ 0.15
CCDC40-205ENST00000571028 P2RX7Q99572 595 aaKnown RBP15.97■□□□□ 0.15
CCDC40-205ENST00000571028 PAGR1Q9BTK6 254 aa15.97■□□□□ 0.15
CCDC40-205ENST00000571028 MYO5AQ9Y4I1 1855 aaKnown RBP15.97■□□□□ 0.15
CCDC40-205ENST00000571028 LOC285556D6RIA3 1793 aa15.96■□□□□ 0.15
CCDC40-205ENST00000571028 TCRBV5S4A2TA0A5A2 114 aa15.96■□□□□ 0.15
CCDC40-205ENST00000571028 NPM3O75607 178 aaKnown RBP15.96■□□□□ 0.15
CCDC40-205ENST00000571028 ATN1P54259 1190 aaPredicted RBP15.96■□□□□ 0.15
CCDC40-205ENST00000571028 BACE1P56817 501 aa15.96■□□□□ 0.15
CCDC40-205ENST00000571028 RHBDL3P58872 404 aa15.96■□□□□ 0.15
CCDC40-205ENST00000571028 CCL14Q16627 93 aa15.96■□□□□ 0.15
CCDC40-205ENST00000571028 MFSD14CQ5VZR4 134 aa15.96■□□□□ 0.15
CCDC40-205ENST00000571028 LHX8Q68G74 356 aa15.96■□□□□ 0.15
CCDC40-205ENST00000571028 GPR142Q7Z601 462 aa15.96■□□□□ 0.15
CCDC40-205ENST00000571028 PLEKHH3Q7Z736 793 aa15.96■□□□□ 0.15
CCDC40-205ENST00000571028 GTF3C2Q8WUA4 911 aaPredicted RBP15.96■□□□□ 0.15
CCDC40-205ENST00000571028 TGFBRAP1Q8WUH2 860 aa15.96■□□□□ 0.15
CCDC40-205ENST00000571028 TRIM34Q9BYJ4 488 aa15.96■□□□□ 0.15
CCDC40-205ENST00000571028 ARMT1Q9H993 441 aa15.96■□□□□ 0.15
CCDC40-205ENST00000571028 HERC5Q9UII4 1024 aaKnown RBP15.96■□□□□ 0.15
CCDC40-205ENST00000571028 COL2A1P02458 1487 aaPredicted RBP15.96■□□□□ 0.14
CCDC40-205ENST00000571028 PHIPQ8WWQ0 1821 aa15.96■□□□□ 0.14
CCDC40-205ENST00000571028 MYH2Q9UKX2 1941 aa15.96■□□□□ 0.14
CCDC40-205ENST00000571028 MBD4O95243 580 aa15.95■□□□□ 0.14
CCDC40-205ENST00000571028 GSPT1P15170 499 aaKnown RBP15.95■□□□□ 0.14
CCDC40-205ENST00000571028 CNGA1P29973 690 aa15.95■□□□□ 0.14
CCDC40-205ENST00000571028 HOXA7P31268 230 aaPredicted RBP15.95■□□□□ 0.14
CCDC40-205ENST00000571028 USP5P45974 858 aa15.95■□□□□ 0.14
CCDC40-205ENST00000571028 ERVK-9P63128 1117 aa15.95■□□□□ 0.14
CCDC40-205ENST00000571028 ERVK-24P63145 666 aa15.95■□□□□ 0.14
CCDC40-205ENST00000571028 LRRFIP1Q32MZ4 808 aaKnown RBP15.95■□□□□ 0.14
CCDC40-205ENST00000571028 MAPKAPK5Q8IW41 473 aa15.95■□□□□ 0.14
CCDC40-205ENST00000571028 LCORLQ8N3X6 602 aa15.95■□□□□ 0.14
CCDC40-205ENST00000571028 TXNRD2Q9NNW7 524 aa15.95■□□□□ 0.14
CCDC40-205ENST00000571028 VCANP13611 3396 aa15.95■□□□□ 0.14
CCDC40-205ENST00000571028 MSCO60682 206 aa15.94■□□□□ 0.14
CCDC40-205ENST00000571028 PEX10O60683 326 aa15.94■□□□□ 0.14
CCDC40-205ENST00000571028 IGSF3O75054 1194 aa15.94■□□□□ 0.14
CCDC40-205ENST00000571028 ASNSP08243 561 aa15.94■□□□□ 0.14
CCDC40-205ENST00000571028 FOSL2P15408 326 aa15.94■□□□□ 0.14
CCDC40-205ENST00000571028 PLCG2P16885 1265 aa15.94■□□□□ 0.14
CCDC40-205ENST00000571028 UBE3CQ15386 1083 aa15.94■□□□□ 0.14
CCDC40-205ENST00000571028 WDR78Q5VTH9 848 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms