RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 PABPC4Q13310 644 aaKnown RBP eCLIP15.18■□□□□ 0.02
TVP23B-204ENST00000571018 RAB3GAP1Q15042 981 aa15.18■□□□□ 0.02
TVP23B-204ENST00000571018 ARHGEF6Q15052 776 aa15.18■□□□□ 0.02
TVP23B-204ENST00000571018 C16orf86Q6ZW13 317 aa15.18■□□□□ 0.02
TVP23B-204ENST00000571018 EFCC1Q9HA90 598 aa15.18■□□□□ 0.02
TVP23B-204ENST00000571018 TMOD4Q9NZQ9 345 aa15.18■□□□□ 0.02
TVP23B-204ENST00000571018 LOC285556D6RIA3 1793 aa15.17■□□□□ 0.02
TVP23B-204ENST00000571018 BCRP11274 1271 aa15.17■□□□□ 0.02
TVP23B-204ENST00000571018 CDK8P49336 464 aa15.17■□□□□ 0.02
TVP23B-204ENST00000571018 MNX1P50219 401 aaPredicted RBP15.17■□□□□ 0.02
TVP23B-204ENST00000571018 KIF22Q14807 665 aa15.17■□□□□ 0.02
TVP23B-204ENST00000571018 CCDC17Q96LX7 622 aa15.17■□□□□ 0.02
TVP23B-204ENST00000571018 EPB41L4AQ9HCS5 686 aaPredicted RBP15.17■□□□□ 0.02
TVP23B-204ENST00000571018 PNMA3Q9UL41 463 aa15.17■□□□□ 0.02
TVP23B-204ENST00000571018 BAZ2AQ9UIF9 1905 aaKnown RBP15.17■□□□□ 0.02
TVP23B-204ENST00000571018 CCDC85CA6NKD9 419 aa15.16■□□□□ 0.02
TVP23B-204ENST00000571018 TRIM6-TRIM34B2RNG4 842 aa15.16■□□□□ 0.02
TVP23B-204ENST00000571018 APPP05067 770 aa15.16■□□□□ 0.02
TVP23B-204ENST00000571018 HOXA7P31268 230 aaPredicted RBP15.16■□□□□ 0.02
TVP23B-204ENST00000571018 SEPT2Q15019 361 aa15.16■□□□□ 0.02
TVP23B-204ENST00000571018 USP17L2Q6R6M4 530 aa15.16■□□□□ 0.02
TVP23B-204ENST00000571018 TMEM179Q6ZVK1 233 aa15.16■□□□□ 0.02
TVP23B-204ENST00000571018 IFNL3Q8IZI9 196 aa15.16■□□□□ 0.02
TVP23B-204ENST00000571018 SMCR8Q8TEV9 937 aaPredicted RBP15.16■□□□□ 0.02
TVP23B-204ENST00000571018 C12orf42Q96LP6 360 aa15.16■□□□□ 0.02
TVP23B-204ENST00000571018 KIAA1683Q9H0B3 1180 aa15.16■□□□□ 0.02
TVP23B-204ENST00000571018 HELLSQ9NRZ9 838 aa15.16■□□□□ 0.02
TVP23B-204ENST00000571018 EMILIN3Q9NT22 766 aa15.16■□□□□ 0.02
TVP23B-204ENST00000571018 HPS5Q9UPZ3 1129 aa15.16■□□□□ 0.02
TVP23B-204ENST00000571018 PTPN22Q9Y2R2 807 aa15.16■□□□□ 0.02
TVP23B-204ENST00000571018 MINDY4BA8MYZ0 360 aa15.15■□□□□ 0.02
TVP23B-204ENST00000571018 MPHOSPH10O00566 681 aaKnown RBP15.15■□□□□ 0.02
TVP23B-204ENST00000571018 GNRH1P01148 92 aa15.15■□□□□ 0.02
TVP23B-204ENST00000571018 OSBPP22059 807 aa15.15■□□□□ 0.02
TVP23B-204ENST00000571018 TDO2P48775 406 aa15.15■□□□□ 0.02
TVP23B-204ENST00000571018 ACER1Q8TDN7 264 aa15.15■□□□□ 0.02
TVP23B-204ENST00000571018 RILPL2Q969X0 211 aa15.15■□□□□ 0.02
TVP23B-204ENST00000571018 FEZ1Q99689 392 aa15.15■□□□□ 0.02
TVP23B-204ENST00000571018 NACAP1Q9BZK3 213 aa15.15■□□□□ 0.02
TVP23B-204ENST00000571018 ARHGAP39Q9C0H5 1083 aa15.15■□□□□ 0.02
TVP23B-204ENST00000571018 ASCC2Q9H1I8 757 aaPredicted RBP15.15■□□□□ 0.02
TVP23B-204ENST00000571018 ROBO3Q96MS0 1386 aa15.14■□□□□ 0.01
TVP23B-204ENST00000571018 AKR1B1P15121 316 aa15.14■□□□□ 0.01
TVP23B-204ENST00000571018 PDE4AP27815 886 aa15.14■□□□□ 0.01
TVP23B-204ENST00000571018 GCLCP48506 637 aaPredicted RBP15.14■□□□□ 0.01
TVP23B-204ENST00000571018 USP14P54578 494 aa15.14■□□□□ 0.01
TVP23B-204ENST00000571018 CCDC129Q6ZRS4 1044 aa15.14■□□□□ 0.01
TVP23B-204ENST00000571018 A0A1W2PRG0 241 aa15.13■□□□□ 0.01
TVP23B-204ENST00000571018 FOXP2O15409 715 aa15.13■□□□□ 0.01
TVP23B-204ENST00000571018 CTGFP29279 349 aa15.13■□□□□ 0.01
TVP23B-204ENST00000571018 PSMC4P43686 418 aa15.13■□□□□ 0.01
TVP23B-204ENST00000571018 IRX3P78415 501 aaPredicted RBP15.13■□□□□ 0.01
TVP23B-204ENST00000571018 ZYXQ15942 572 aaKnown RBP15.13■□□□□ 0.01
TVP23B-204ENST00000571018 MCMDC2Q4G0Z9 681 aa15.13■□□□□ 0.01
TVP23B-204ENST00000571018 SIAH1Q8IUQ4 282 aa15.13■□□□□ 0.01
TVP23B-204ENST00000571018 FAM227BQ96M60 508 aa15.13■□□□□ 0.01
TVP23B-204ENST00000571018 NAPBQ9H115 298 aa15.13■□□□□ 0.01
TVP23B-204ENST00000571018 A0A0D9SFI3 127 aa15.12■□□□□ 0.01
TVP23B-204ENST00000571018 SDSP20132 328 aa15.12■□□□□ 0.01
TVP23B-204ENST00000571018 RASA1P20936 1047 aa15.12■□□□□ 0.01
TVP23B-204ENST00000571018 PRMT2P55345 433 aa15.12■□□□□ 0.01
TVP23B-204ENST00000571018 NMIQ13287 307 aaPredicted RBP15.12■□□□□ 0.01
TVP23B-204ENST00000571018 FAM110CQ1W6H9 321 aa15.12■□□□□ 0.01
TVP23B-204ENST00000571018 ANKRD13CQ8N6S4 541 aa15.12■□□□□ 0.01
TVP23B-204ENST00000571018 TRIM47Q96LD4 638 aa15.12■□□□□ 0.01
TVP23B-204ENST00000571018 P2RX7Q99572 595 aaKnown RBP15.12■□□□□ 0.01
TVP23B-204ENST00000571018 MKNK2Q9HBH9 465 aa15.12■□□□□ 0.01
TVP23B-204ENST00000571018 USP17L15C9J2P7 530 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 USP17L13C9JLJ4 530 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 USP17L11C9JVI0 530 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 USP17L18D6R9N7 530 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 USP17L22D6RA61 530 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 USP17L17D6RBQ6 530 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 USP17L19D6RCP7 530 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 USP17L20D6RJB6 530 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 FMNL1O95466 1100 aaPredicted RBP15.11■□□□□ 0.01
TVP23B-204ENST00000571018 HOXD10P28358 340 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 FCGRTP55899 365 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 ICA1Q05084 483 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 USP17L24Q0WX57 530 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 VPS53Q5VIR6 699 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 STK11IPQ8N1F8 1099 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.11■□□□□ 0.01
TVP23B-204ENST00000571018 KANSL2Q9H9L4 492 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 ZNF287Q9HBT7 754 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 ARHGEF10LQ9HCE6 1279 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 MORF4L1Q9UBU8 362 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 TMX2Q9Y320 296 aa15.11■□□□□ 0.01
TVP23B-204ENST00000571018 ECM2O94769 699 aaPredicted RBP15.1■□□□□ 0.01
TVP23B-204ENST00000571018 VCAM1P19320 739 aa15.1■□□□□ 0.01
TVP23B-204ENST00000571018 HERVK_113P62684 666 aa15.1■□□□□ 0.01
TVP23B-204ENST00000571018 PPARAQ07869 468 aa15.1■□□□□ 0.01
TVP23B-204ENST00000571018 ALX1Q15699 326 aa15.1■□□□□ 0.01
TVP23B-204ENST00000571018 CATSPERGQ6ZRH7 1159 aa15.1■□□□□ 0.01
TVP23B-204ENST00000571018 CLEC10AQ8IUN9 316 aa15.1■□□□□ 0.01
TVP23B-204ENST00000571018 SH2D4AQ9H788 454 aa15.1■□□□□ 0.01
TVP23B-204ENST00000571018 SRRDQ9UH36 339 aa15.1■□□□□ 0.01
TVP23B-204ENST00000571018 PTCH2Q9Y6C5 1203 aa15.1■□□□□ 0.01
TVP23B-204ENST00000571018 ZSWIM8A7E2V4 1837 aa15.1■□□□□ 0.01
TVP23B-204ENST00000571018 HIP1O00291 1037 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms