RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 APPP05067 770 aa16.05■□□□□ 0.16
RPAIN-207ENST00000570883 LACTBP83111 547 aaPredicted RBP16.05■□□□□ 0.16
RPAIN-207ENST00000570883 NMIQ13287 307 aaPredicted RBP16.05■□□□□ 0.16
RPAIN-207ENST00000570883 PKN2Q16513 984 aaKnown RBP16.05■□□□□ 0.16
RPAIN-207ENST00000570883 TICAM2Q86XR7 235 aa16.05■□□□□ 0.16
RPAIN-207ENST00000570883 RILPL2Q969X0 211 aa16.05■□□□□ 0.16
RPAIN-207ENST00000570883 CABP5Q9NP86 173 aa16.05■□□□□ 0.16
RPAIN-207ENST00000570883 PLXNB2O15031 1838 aa16.04■□□□□ 0.16
RPAIN-207ENST00000570883 A0A1W2PRG0 241 aa16.04■□□□□ 0.16
RPAIN-207ENST00000570883 MINDY4BA8MYZ0 360 aa16.04■□□□□ 0.16
RPAIN-207ENST00000570883 ZYXQ15942 572 aaKnown RBP16.04■□□□□ 0.16
RPAIN-207ENST00000570883 VPS53Q5VIR6 699 aa16.04■□□□□ 0.16
RPAIN-207ENST00000570883 FBXO46Q6PJ61 603 aaPredicted RBP16.04■□□□□ 0.16
RPAIN-207ENST00000570883 TMEM179Q6ZVK1 233 aa16.04■□□□□ 0.16
RPAIN-207ENST00000570883 ZNF589Q86UQ0 364 aaPredicted RBP16.04■□□□□ 0.16
RPAIN-207ENST00000570883 C12orf42Q96LP6 360 aa16.04■□□□□ 0.16
RPAIN-207ENST00000570883 FEZ1Q99689 392 aa16.04■□□□□ 0.16
RPAIN-207ENST00000570883 KIAA1683Q9H0B3 1180 aa16.04■□□□□ 0.16
RPAIN-207ENST00000570883 ASCC2Q9H1I8 757 aaPredicted RBP16.04■□□□□ 0.16
RPAIN-207ENST00000570883 EFCC1Q9HA90 598 aa16.04■□□□□ 0.16
RPAIN-207ENST00000570883 HELLSQ9NRZ9 838 aa16.04■□□□□ 0.16
RPAIN-207ENST00000570883 TMOD4Q9NZQ9 345 aa16.04■□□□□ 0.16
RPAIN-207ENST00000570883 HPS5Q9UPZ3 1129 aa16.04■□□□□ 0.16
RPAIN-207ENST00000570883 A0A0G2JMZ2 1700 aa16.04■□□□□ 0.16
RPAIN-207ENST00000570883 KIAA0100Q14667 2235 aaKnown RBP16.03■□□□□ 0.16
RPAIN-207ENST00000570883 BRCA2P51587 3418 aa16.03■□□□□ 0.16
RPAIN-207ENST00000570883 ECM2O94769 699 aaPredicted RBP16.03■□□□□ 0.16
RPAIN-207ENST00000570883 GSPT1P15170 499 aaKnown RBP16.03■□□□□ 0.16
RPAIN-207ENST00000570883 RASA1P20936 1047 aa16.03■□□□□ 0.16
RPAIN-207ENST00000570883 USP17L2Q6R6M4 530 aa16.03■□□□□ 0.16
RPAIN-207ENST00000570883 SIAH1Q8IUQ4 282 aa16.03■□□□□ 0.16
RPAIN-207ENST00000570883 STK11IPQ8N1F8 1099 aa16.03■□□□□ 0.16
RPAIN-207ENST00000570883 SMCR8Q8TEV9 937 aaPredicted RBP16.03■□□□□ 0.16
RPAIN-207ENST00000570883 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.03■□□□□ 0.16
RPAIN-207ENST00000570883 PNMA3Q9UL41 463 aa16.03■□□□□ 0.16
RPAIN-207ENST00000570883 COL11A1P12107 1806 aaPredicted RBP16.03■□□□□ 0.16
RPAIN-207ENST00000570883 RBBP6Q7Z6E9 1792 aaKnown RBP16.03■□□□□ 0.16
RPAIN-207ENST00000570883 SDSP20132 328 aa16.02■□□□□ 0.16
RPAIN-207ENST00000570883 HOXA7P31268 230 aaPredicted RBP16.02■□□□□ 0.16
RPAIN-207ENST00000570883 MCMDC2Q4G0Z9 681 aa16.02■□□□□ 0.16
RPAIN-207ENST00000570883 TTC22Q5TAA0 569 aa16.02■□□□□ 0.16
RPAIN-207ENST00000570883 TRIM47Q96LD4 638 aa16.02■□□□□ 0.16
RPAIN-207ENST00000570883 CCDC17Q96LX7 622 aa16.02■□□□□ 0.16
RPAIN-207ENST00000570883 NACAP1Q9BZK3 213 aa16.02■□□□□ 0.16
RPAIN-207ENST00000570883 NAPBQ9H115 298 aa16.02■□□□□ 0.16
RPAIN-207ENST00000570883 PTPN22Q9Y2R2 807 aa16.02■□□□□ 0.16
RPAIN-207ENST00000570883 CCDC85CA6NKD9 419 aa16.01■□□□□ 0.15
RPAIN-207ENST00000570883 VCAM1P19320 739 aa16.01■□□□□ 0.15
RPAIN-207ENST00000570883 ICA1Q05084 483 aa16.01■□□□□ 0.15
RPAIN-207ENST00000570883 PABPC4Q13310 644 aaKnown RBP eCLIP16.01■□□□□ 0.15
RPAIN-207ENST00000570883 KIAA1755Q5JYT7 1200 aa16.01■□□□□ 0.15
RPAIN-207ENST00000570883 POTEEQ6S8J3 1075 aa16.01■□□□□ 0.15
RPAIN-207ENST00000570883 ANKRD13CQ8N6S4 541 aa16.01■□□□□ 0.15
RPAIN-207ENST00000570883 CCDC171Q6TFL3 1326 aa16■□□□□ 0.15
RPAIN-207ENST00000570883 PEX10O60683 326 aa16■□□□□ 0.15
RPAIN-207ENST00000570883 PRDM1O75626 825 aa16■□□□□ 0.15
RPAIN-207ENST00000570883 OSBPP22059 807 aa16■□□□□ 0.15
RPAIN-207ENST00000570883 PSMC4P43686 418 aa16■□□□□ 0.15
RPAIN-207ENST00000570883 USP14P54578 494 aa16■□□□□ 0.15
RPAIN-207ENST00000570883 IRX3P78415 501 aaPredicted RBP16■□□□□ 0.15
RPAIN-207ENST00000570883 PPARAQ07869 468 aa16■□□□□ 0.15
RPAIN-207ENST00000570883 P2RX7Q99572 595 aaKnown RBP16■□□□□ 0.15
RPAIN-207ENST00000570883 TNRC18O15417 2968 aaPredicted RBP15.99■□□□□ 0.15
RPAIN-207ENST00000570883 GCLCP48506 637 aaPredicted RBP15.99■□□□□ 0.15
RPAIN-207ENST00000570883 HERVK_113P62684 666 aa15.99■□□□□ 0.15
RPAIN-207ENST00000570883 KIF22Q14807 665 aa15.99■□□□□ 0.15
RPAIN-207ENST00000570883 ALX1Q15699 326 aa15.99■□□□□ 0.15
RPAIN-207ENST00000570883 FAM110CQ1W6H9 321 aa15.99■□□□□ 0.15
RPAIN-207ENST00000570883 TACC3Q9Y6A5 838 aa15.99■□□□□ 0.15
RPAIN-207ENST00000570883 PTCH2Q9Y6C5 1203 aa15.99■□□□□ 0.15
RPAIN-207ENST00000570883 PLIN4Q96Q06 1357 aa15.99■□□□□ 0.15
RPAIN-207ENST00000570883 ZMYM6O95789 1325 aa15.98■□□□□ 0.15
RPAIN-207ENST00000570883 IGKV6D-41A0A0C4DH26 115 aa15.98■□□□□ 0.15
RPAIN-207ENST00000570883 HSPD1P10809 573 aaKnown RBP15.98■□□□□ 0.15
RPAIN-207ENST00000570883 EEF2P13639 858 aaKnown RBP15.98■□□□□ 0.15
RPAIN-207ENST00000570883 CTDSPL2Q05D32 466 aa15.98■□□□□ 0.15
RPAIN-207ENST00000570883 ARHGEF6Q15052 776 aa15.98■□□□□ 0.15
RPAIN-207ENST00000570883 CWC27Q6UX04 472 aaKnown RBP15.98■□□□□ 0.15
RPAIN-207ENST00000570883 IL25Q9H293 177 aa15.98■□□□□ 0.15
RPAIN-207ENST00000570883 KANSL2Q9H9L4 492 aa15.98■□□□□ 0.15
RPAIN-207ENST00000570883 MKNK2Q9HBH9 465 aa15.98■□□□□ 0.15
RPAIN-207ENST00000570883 ARHGEF10LQ9HCE6 1279 aa15.98■□□□□ 0.15
RPAIN-207ENST00000570883 TXNRD2Q9NNW7 524 aa15.98■□□□□ 0.15
RPAIN-207ENST00000570883 DIAPH3Q9NSV4 1193 aa15.98■□□□□ 0.15
RPAIN-207ENST00000570883 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.98■□□□□ 0.15
RPAIN-207ENST00000570883 TMX2Q9Y320 296 aa15.98■□□□□ 0.15
RPAIN-207ENST00000570883 USP17L15C9J2P7 530 aa15.97■□□□□ 0.15
RPAIN-207ENST00000570883 USP17L13C9JLJ4 530 aa15.97■□□□□ 0.15
RPAIN-207ENST00000570883 USP17L11C9JVI0 530 aa15.97■□□□□ 0.15
RPAIN-207ENST00000570883 USP17L18D6R9N7 530 aa15.97■□□□□ 0.15
RPAIN-207ENST00000570883 USP17L22D6RA61 530 aa15.97■□□□□ 0.15
RPAIN-207ENST00000570883 USP17L17D6RBQ6 530 aa15.97■□□□□ 0.15
RPAIN-207ENST00000570883 USP17L19D6RCP7 530 aa15.97■□□□□ 0.15
RPAIN-207ENST00000570883 USP17L20D6RJB6 530 aa15.97■□□□□ 0.15
RPAIN-207ENST00000570883 FMNL1O95466 1100 aaPredicted RBP15.97■□□□□ 0.15
RPAIN-207ENST00000570883 GNRH1P01148 92 aa15.97■□□□□ 0.15
RPAIN-207ENST00000570883 FGAP02671 866 aa15.97■□□□□ 0.15
RPAIN-207ENST00000570883 USP17L24Q0WX57 530 aa15.97■□□□□ 0.15
RPAIN-207ENST00000570883 CATSPERGQ6ZRH7 1159 aa15.97■□□□□ 0.15
RPAIN-207ENST00000570883 SKAP1Q86WV1 359 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms