RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 PSMC4P43686 418 aa8.03□□□□□ -1.12
SMG6-204ENST00000570606 RGS3P49796 1198 aa8.03□□□□□ -1.12
SMG6-204ENST00000570606 PRMT2P55345 433 aa8.03□□□□□ -1.12
SMG6-204ENST00000570606 PICALMQ13492 652 aa8.03□□□□□ -1.12
SMG6-204ENST00000570606 RASGRF1Q13972 1273 aa8.03□□□□□ -1.12
SMG6-204ENST00000570606 HABP4Q5JVS0 413 aaKnown RBP8.03□□□□□ -1.12
SMG6-204ENST00000570606 CCDC102BQ68D86 513 aa8.03□□□□□ -1.12
SMG6-204ENST00000570606 SYMPKQ92797 1274 aaKnown RBP8.03□□□□□ -1.12
SMG6-204ENST00000570606 MEIS3Q99687 375 aa8.03□□□□□ -1.12
SMG6-204ENST00000570606 TRIM34Q9BYJ4 488 aa8.03□□□□□ -1.12
SMG6-204ENST00000570606 PLSCR2Q9NRY7 297 aa8.03□□□□□ -1.12
SMG6-204ENST00000570606 ZNF112Q9UJU3 913 aa8.03□□□□□ -1.12
SMG6-204ENST00000570606 DOCK3Q8IZD9 2030 aa8.03□□□□□ -1.12
SMG6-204ENST00000570606 GAKO14976 1311 aa8.03□□□□□ -1.12
SMG6-204ENST00000570606 ADGRA2Q96PE1 1338 aa8.03□□□□□ -1.12
SMG6-204ENST00000570606 LOC285556D6RIA3 1793 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 ATRNL1Q5VV63 1379 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 SOWAHBA6NEL2 793 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 SRGAP3O43295 1099 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 GNAI3P08754 354 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 ABL2P42684 1182 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 BTDP43251 543 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 FCGRTP55899 365 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 MVPQ14764 893 aaKnown RBP8.02□□□□□ -1.13
SMG6-204ENST00000570606 PUS10Q3MIT2 529 aaKnown RBP8.02□□□□□ -1.13
SMG6-204ENST00000570606 SPTY2D1Q68D10 685 aaPredicted RBP8.02□□□□□ -1.13
SMG6-204ENST00000570606 C17orf99Q6UX52 265 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 GADL1Q6ZQY3 521 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 SCYL3Q8IZE3 742 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 LRRN4Q8WUT4 740 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 TRIM47Q96LD4 638 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 PRM3Q9NNZ6 103 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 COPRSQ9NQ92 184 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 BIN2Q9UBW5 565 aaPredicted RBP8.02□□□□□ -1.13
SMG6-204ENST00000570606 SRRDQ9UH36 339 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 AKAP2Q9Y2D5 859 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 SLC27A5Q9Y2P5 690 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 MROH7-TTC4A0A0A0MT08 1334 aa8.02□□□□□ -1.13
SMG6-204ENST00000570606 PDS5AQ29RF7 1337 aaKnown RBP8.02□□□□□ -1.13
SMG6-204ENST00000570606 CDK5RAP2Q96SN8 1893 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 A0A1B0GUL7 405 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 CXCL11O14625 94 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 ENTPD3O75355 529 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 CYP2C8P10632 490 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 CTGFP29279 349 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 GRK4P32298 578 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 TFCP2Q12800 502 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 GORABQ5T7V8 394 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 FASTKD5Q7L8L6 764 aaKnown RBP8.01□□□□□ -1.13
SMG6-204ENST00000570606 RETREG3Q86VR2 466 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 ZFPM1Q8IX07 1006 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 ANKK1Q8NFD2 765 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 PRR7Q8TB68 274 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 SMCR8Q8TEV9 937 aaPredicted RBP8.01□□□□□ -1.13
SMG6-204ENST00000570606 XAGE2Q96GT9 111 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 PRR14Q9BWN1 585 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 IDI2Q9BXS1 227 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 NDUFB9Q9Y6M9 179 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 ZHX2Q9Y6X8 837 aa8.01□□□□□ -1.13
SMG6-204ENST00000570606 A0A0G2JLL6 359 aaPredicted RBP8□□□□□ -1.13
SMG6-204ENST00000570606 TRIM75PA6NK02 468 aa8□□□□□ -1.13
SMG6-204ENST00000570606 PTPRAP18433 802 aa8□□□□□ -1.13
SMG6-204ENST00000570606 RARSP54136 660 aaKnown RBP8□□□□□ -1.13
SMG6-204ENST00000570606 TIMM10P62072 90 aa8□□□□□ -1.13
SMG6-204ENST00000570606 UBXN2AP68543 259 aa8□□□□□ -1.13
SMG6-204ENST00000570606 GSTO1P78417 241 aa8□□□□□ -1.13
SMG6-204ENST00000570606 PRKCZQ05513 592 aa8□□□□□ -1.13
SMG6-204ENST00000570606 IRF5Q13568 498 aa8□□□□□ -1.13
SMG6-204ENST00000570606 MOGSQ13724 837 aa8□□□□□ -1.13
SMG6-204ENST00000570606 MTFR1Q15390 333 aa8□□□□□ -1.13
SMG6-204ENST00000570606 SH3BP5LQ7L8J4 393 aa8□□□□□ -1.13
SMG6-204ENST00000570606 PRRT2Q7Z6L0 340 aaPredicted RBP8□□□□□ -1.13
SMG6-204ENST00000570606 TRMT2AQ8IZ69 625 aaKnown RBP8□□□□□ -1.13
SMG6-204ENST00000570606 NKX2-3Q8TAU0 364 aa8□□□□□ -1.13
SMG6-204ENST00000570606 TSC1Q92574 1164 aa8□□□□□ -1.13
SMG6-204ENST00000570606 NEUROD6Q96NK8 337 aa8□□□□□ -1.13
SMG6-204ENST00000570606 DDX4Q9NQI0 724 aaKnown RBP8□□□□□ -1.13
SMG6-204ENST00000570606 FOCADQ5VW36 1801 aa8□□□□□ -1.13
SMG6-204ENST00000570606 MYO5AQ9Y4I1 1855 aaKnown RBP8□□□□□ -1.13
SMG6-204ENST00000570606 SIPA1L1O43166 1804 aa7.99□□□□□ -1.13
SMG6-204ENST00000570606 DDTLA6NHG4 134 aaPredicted RBP7.99□□□□□ -1.13
SMG6-204ENST00000570606 PHF20L1A8MW92 1017 aa7.99□□□□□ -1.13
SMG6-204ENST00000570606 TNPO2O14787 897 aaKnown RBP7.99□□□□□ -1.13
SMG6-204ENST00000570606 IPO8O15397 1037 aaKnown RBP7.99□□□□□ -1.13
SMG6-204ENST00000570606 CTNND1O60716 968 aaKnown RBP7.99□□□□□ -1.13
SMG6-204ENST00000570606 BCRP11274 1271 aa7.99□□□□□ -1.13
SMG6-204ENST00000570606 CCL5P13501 91 aa7.99□□□□□ -1.13
SMG6-204ENST00000570606 MECOMQ03112 1051 aa7.99□□□□□ -1.13
SMG6-204ENST00000570606 GPAT2Q6NUI2 795 aa7.99□□□□□ -1.13
SMG6-204ENST00000570606 FRAT1Q92837 279 aaPredicted RBP7.99□□□□□ -1.13
SMG6-204ENST00000570606 SHISA4Q96DD7 197 aa7.99□□□□□ -1.13
SMG6-204ENST00000570606 NOL10Q9BSC4 688 aaKnown RBP7.99□□□□□ -1.13
SMG6-204ENST00000570606 RNF208Q9H0X6 261 aa7.99□□□□□ -1.13
SMG6-204ENST00000570606 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.99□□□□□ -1.13
SMG6-204ENST00000570606 RAI14Q9P0K7 980 aa7.99□□□□□ -1.13
SMG6-204ENST00000570606 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.99□□□□□ -1.13
SMG6-204ENST00000570606 AFG3L2Q9Y4W6 797 aa7.99□□□□□ -1.13
SMG6-204ENST00000570606 COL2A1P02458 1487 aaPredicted RBP7.99□□□□□ -1.13
SMG6-204ENST00000570606 MYH1P12882 1939 aa7.98□□□□□ -1.13
SMG6-204ENST00000570606 FAM196BA6NMK8 535 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms