RNA–Protein interactions for RNA: ENST00000570195.5

CMC2-223, Transcript of C-X9-C motif containing 2, human

TSL 3 BASIC

Gene CMC2, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-223	ENST00000570195	CDK5RAP2	Q96SN8	1893 aa		13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	USP17L15	C9J2P7	530 aa		13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	USP17L13	C9JLJ4	530 aa		13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	USP17L11	C9JVI0	530 aa		13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	USP17L18	D6R9N7	530 aa		13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	USP17L22	D6RA61	530 aa		13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	USP17L17	D6RBQ6	530 aa		13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	USP17L19	D6RCP7	530 aa		13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	USP17L20	D6RJB6	530 aa		13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	IPO8	O15397	1037 aa	Known RBP	13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	BCAR3	O75815	825 aa		13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	CNGA1	P29973	690 aa		13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	USP17L24	Q0WX57	530 aa		13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	RAB3GAP1	Q15042	981 aa		13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	MFSD14C	Q5VZR4	134 aa		13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	MIGA1	Q8NAN2	632 aa		13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	RABGAP1	Q9Y3P9	1069 aa		13.46	□□□□□ -0.25
CMC2-223	ENST00000570195	SURF6	O75683	361 aa	Known RBP	13.45	□□□□□ -0.26
CMC2-223	ENST00000570195	IDH1	O75874	414 aa	Known RBP	13.45	□□□□□ -0.26
CMC2-223	ENST00000570195	GLRX3	O76003	335 aa	Known RBP	13.45	□□□□□ -0.26
CMC2-223	ENST00000570195	PTPRE	P23469	700 aa		13.45	□□□□□ -0.26
CMC2-223	ENST00000570195	USP5	P45974	858 aa		13.45	□□□□□ -0.26
CMC2-223	ENST00000570195	ATN1	P54259	1190 aa	Predicted RBP	13.45	□□□□□ -0.26
CMC2-223	ENST00000570195	CCNA1	P78396	465 aa		13.45	□□□□□ -0.26
CMC2-223	ENST00000570195	POLA2	Q14181	598 aa		13.45	□□□□□ -0.26
CMC2-223	ENST00000570195	CATSPERG	Q6ZRH7	1159 aa		13.45	□□□□□ -0.26
CMC2-223	ENST00000570195	ACER1	Q8TDN7	264 aa		13.45	□□□□□ -0.26
CMC2-223	ENST00000570195	C12orf42	Q96LP6	360 aa		13.45	□□□□□ -0.26
CMC2-223	ENST00000570195	FAM161B	Q96MY7	647 aa		13.45	□□□□□ -0.26
CMC2-223	ENST00000570195	TLR7	Q9NYK1	1049 aa	Known RBP	13.45	□□□□□ -0.26
CMC2-223	ENST00000570195	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	FOCAD	Q5VW36	1801 aa		13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	SLC15A5	A6NIM6	579 aa		13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	VCAM1	P19320	739 aa		13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	CYP2C19	P33261	490 aa		13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	ATP2B2	Q01814	1243 aa		13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	TATDN1	Q6P1N9	297 aa		13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	TMEM57	Q8N5G2	664 aa		13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	NPLOC4	Q8TAT6	608 aa		13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	C1orf115	Q9H7X2	142 aa		13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	BTBD7	Q9P203	1132 aa		13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	DDX20	Q9UHI6	824 aa	Known RBP	13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	SERPINB13	Q9UIV8	391 aa		13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	DBNL	Q9UJU6	430 aa	Known RBP	13.44	□□□□□ -0.26
CMC2-223	ENST00000570195	USP14	P54578	494 aa		13.43	□□□□□ -0.26
CMC2-223	ENST00000570195	ATP8B2	P98198	1209 aa		13.43	□□□□□ -0.26
CMC2-223	ENST00000570195	ABCB5	Q2M3G0	1257 aa		13.43	□□□□□ -0.26
CMC2-223	ENST00000570195	CERKL	Q49MI3	558 aa	Predicted RBP	13.43	□□□□□ -0.26
CMC2-223	ENST00000570195	MAGEB6	Q8N7X4	407 aa		13.43	□□□□□ -0.26
CMC2-223	ENST00000570195	TRPV1	Q8NER1	839 aa		13.43	□□□□□ -0.26
CMC2-223	ENST00000570195	SSH3	Q8TE77	659 aa		13.43	□□□□□ -0.26
CMC2-223	ENST00000570195	LPAR1	Q92633	364 aa		13.43	□□□□□ -0.26
CMC2-223	ENST00000570195	GUCD1	Q96NT3	240 aa		13.43	□□□□□ -0.26
CMC2-223	ENST00000570195	KIAA1683	Q9H0B3	1180 aa		13.43	□□□□□ -0.26
CMC2-223	ENST00000570195	IVNS1ABP	Q9Y6Y0	642 aa		13.43	□□□□□ -0.26
CMC2-223	ENST00000570195	FRMPD3	Q5JV73	1810 aa		13.42	□□□□□ -0.26
CMC2-223	ENST00000570195	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.42	□□□□□ -0.26
CMC2-223	ENST00000570195	POTEB2	H3BUK9	544 aa		13.42	□□□□□ -0.26
CMC2-223	ENST00000570195	GRB14	Q14449	540 aa		13.42	□□□□□ -0.26
CMC2-223	ENST00000570195	GJC2	Q5T442	439 aa	Predicted RBP	13.42	□□□□□ -0.26
CMC2-223	ENST00000570195	TTC6	Q86TZ1	520 aa		13.42	□□□□□ -0.26
CMC2-223	ENST00000570195	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
CMC2-223	ENST00000570195	COL25A1	Q9BXS0	654 aa	Predicted RBP	13.42	□□□□□ -0.26
CMC2-223	ENST00000570195	EHD4	Q9H223	541 aa		13.42	□□□□□ -0.26
CMC2-223	ENST00000570195	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.42	□□□□□ -0.26
CMC2-223	ENST00000570195	CABP5	Q9NP86	173 aa		13.42	□□□□□ -0.26
CMC2-223	ENST00000570195	MYH1	P12882	1939 aa		13.41	□□□□□ -0.26
CMC2-223	ENST00000570195	UNC80	Q8N2C7	3258 aa		13.41	□□□□□ -0.26
CMC2-223	ENST00000570195	DNM1L	O00429	736 aa		13.41	□□□□□ -0.26
CMC2-223	ENST00000570195	MSC	O60682	206 aa		13.41	□□□□□ -0.26
CMC2-223	ENST00000570195	IGSF3	O75054	1194 aa		13.41	□□□□□ -0.26
CMC2-223	ENST00000570195	HOXC6	P09630	235 aa		13.41	□□□□□ -0.26
CMC2-223	ENST00000570195	PLCD1	P51178	756 aa		13.41	□□□□□ -0.26
CMC2-223	ENST00000570195	RTP1	P59025	263 aa		13.41	□□□□□ -0.26
CMC2-223	ENST00000570195	ANO1	Q5XXA6	986 aa		13.41	□□□□□ -0.26
CMC2-223	ENST00000570195	LBX2	Q6XYB7	198 aa		13.41	□□□□□ -0.26
CMC2-223	ENST00000570195	EAF2	Q96CJ1	260 aa	Predicted RBP	13.41	□□□□□ -0.26
CMC2-223	ENST00000570195	ANTXR1	Q9H6X2	564 aa		13.41	□□□□□ -0.26
CMC2-223	ENST00000570195	PRKAG2	Q9UGJ0	569 aa		13.41	□□□□□ -0.26
CMC2-223	ENST00000570195	ATP11B	Q9Y2G3	1177 aa		13.41	□□□□□ -0.26
CMC2-223	ENST00000570195	MYCN	P04198	464 aa	Predicted RBP	13.4	□□□□□ -0.26
CMC2-223	ENST00000570195	CYBA	P13498	195 aa		13.4	□□□□□ -0.26
CMC2-223	ENST00000570195	GUCY1A2	P33402	732 aa		13.4	□□□□□ -0.26
CMC2-223	ENST00000570195	SHMT1	P34896	483 aa		13.4	□□□□□ -0.26
CMC2-223	ENST00000570195	EVX2	Q03828	476 aa		13.4	□□□□□ -0.26
CMC2-223	ENST00000570195	C1QBP	Q07021	282 aa	Known RBP	13.4	□□□□□ -0.26
CMC2-223	ENST00000570195	SEPT2	Q15019	361 aa		13.4	□□□□□ -0.26
CMC2-223	ENST00000570195	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.4	□□□□□ -0.26
CMC2-223	ENST00000570195	DPP9	Q86TI2	863 aa		13.4	□□□□□ -0.26
CMC2-223	ENST00000570195	POLR3D	P05423	398 aa	Predicted RBP	13.39	□□□□□ -0.27
CMC2-223	ENST00000570195	ADORA2A	P29274	412 aa		13.39	□□□□□ -0.27
CMC2-223	ENST00000570195	MAP3K12	Q12852	859 aa		13.39	□□□□□ -0.27
CMC2-223	ENST00000570195	ZNF697	Q5TEC3	545 aa		13.39	□□□□□ -0.27
CMC2-223	ENST00000570195	ZKSCAN2	Q63HK3	967 aa		13.39	□□□□□ -0.27
CMC2-223	ENST00000570195	CERS3	Q8IU89	383 aa		13.39	□□□□□ -0.27
CMC2-223	ENST00000570195	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.39	□□□□□ -0.27
CMC2-223	ENST00000570195	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms