RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 USP17L17D6RBQ6 530 aa20.58■□□□□ 0.89
MAP1LC3B-208ENST00000570189 USP17L19D6RCP7 530 aa20.58■□□□□ 0.89
MAP1LC3B-208ENST00000570189 USP17L20D6RJB6 530 aa20.58■□□□□ 0.89
MAP1LC3B-208ENST00000570189 ECM2O94769 699 aaPredicted RBP20.58■□□□□ 0.89
MAP1LC3B-208ENST00000570189 CCL5P13501 91 aa20.58■□□□□ 0.89
MAP1LC3B-208ENST00000570189 USP17L24Q0WX57 530 aa20.58■□□□□ 0.89
MAP1LC3B-208ENST00000570189 C12orf60Q5U649 245 aa20.58■□□□□ 0.89
MAP1LC3B-208ENST00000570189 GPRC5AQ8NFJ5 357 aa20.58■□□□□ 0.89
MAP1LC3B-208ENST00000570189 SHISA4Q96DD7 197 aa20.58■□□□□ 0.89
MAP1LC3B-208ENST00000570189 RBPJLQ9UBG7 517 aa20.58■□□□□ 0.89
MAP1LC3B-208ENST00000570189 PRKAB2O43741 272 aa20.57■□□□□ 0.88
MAP1LC3B-208ENST00000570189 AAMPQ13685 434 aa20.57■□□□□ 0.88
MAP1LC3B-208ENST00000570189 SLFNL1Q499Z3 407 aa20.57■□□□□ 0.88
MAP1LC3B-208ENST00000570189 GIMAP6Q6P9H5 292 aa20.57■□□□□ 0.88
MAP1LC3B-208ENST00000570189 CATSPERGQ6ZRH7 1159 aa20.57■□□□□ 0.88
MAP1LC3B-208ENST00000570189 TMEM179Q6ZVK1 233 aa20.57■□□□□ 0.88
MAP1LC3B-208ENST00000570189 CCDC17Q96LX7 622 aa20.57■□□□□ 0.88
MAP1LC3B-208ENST00000570189 FEZ1Q99689 392 aa20.57■□□□□ 0.88
MAP1LC3B-208ENST00000570189 PUS7LQ9H0K6 701 aaKnown RBP20.57■□□□□ 0.88
MAP1LC3B-208ENST00000570189 TXNRD2Q9NNW7 524 aa20.57■□□□□ 0.88
MAP1LC3B-208ENST00000570189 RABGAP1Q9Y3P9 1069 aa20.57■□□□□ 0.88
MAP1LC3B-208ENST00000570189 ZFYP08048 801 aaPredicted RBP20.56■□□□□ 0.88
MAP1LC3B-208ENST00000570189 VCAM1P19320 739 aa20.56■□□□□ 0.88
MAP1LC3B-208ENST00000570189 MAPK4P31152 587 aa20.56■□□□□ 0.88
MAP1LC3B-208ENST00000570189 ERVK-9P63128 1117 aa20.56■□□□□ 0.88
MAP1LC3B-208ENST00000570189 ERVK-24P63145 666 aa20.56■□□□□ 0.88
MAP1LC3B-208ENST00000570189 EVX2Q03828 476 aa20.56■□□□□ 0.88
MAP1LC3B-208ENST00000570189 SEPT2Q15019 361 aa20.56■□□□□ 0.88
MAP1LC3B-208ENST00000570189 POTEEQ6S8J3 1075 aa20.56■□□□□ 0.88
MAP1LC3B-208ENST00000570189 C16orf86Q6ZW13 317 aa20.56■□□□□ 0.88
MAP1LC3B-208ENST00000570189 UBE2Q1Q7Z7E8 422 aa20.56■□□□□ 0.88
MAP1LC3B-208ENST00000570189 AMOTL1Q8IY63 956 aa20.56■□□□□ 0.88
MAP1LC3B-208ENST00000570189 ACER1Q8TDN7 264 aa20.56■□□□□ 0.88
MAP1LC3B-208ENST00000570189 DDRGK1Q96HY6 314 aa20.56■□□□□ 0.88
MAP1LC3B-208ENST00000570189 RNF208Q9H0X6 261 aa20.56■□□□□ 0.88
MAP1LC3B-208ENST00000570189 BCL11AQ9H165 835 aa20.56■□□□□ 0.88
MAP1LC3B-208ENST00000570189 CHGBP05060 677 aa20.55■□□□□ 0.88
MAP1LC3B-208ENST00000570189 INHAP05111 366 aa20.55■□□□□ 0.88
MAP1LC3B-208ENST00000570189 CYP2D6P10635 497 aa20.55■□□□□ 0.88
MAP1LC3B-208ENST00000570189 XRCC5P13010 732 aaKnown RBP20.55■□□□□ 0.88
MAP1LC3B-208ENST00000570189 SOCS4Q8WXH5 440 aa20.55■□□□□ 0.88
MAP1LC3B-208ENST00000570189 APPBP2Q92624 585 aa20.55■□□□□ 0.88
MAP1LC3B-208ENST00000570189 STRBPQ96SI9 672 aaKnown RBP20.55■□□□□ 0.88
MAP1LC3B-208ENST00000570189 PAK6Q9NQU5 681 aaPredicted RBP20.55■□□□□ 0.88
MAP1LC3B-208ENST00000570189 ARPP21Q9UBL0 812 aaPredicted RBP20.55■□□□□ 0.88
MAP1LC3B-208ENST00000570189 BIN2Q9UBW5 565 aaPredicted RBP20.55■□□□□ 0.88
MAP1LC3B-208ENST00000570189 SALL3Q9BXA9 1300 aa20.54■□□□□ 0.88
MAP1LC3B-208ENST00000570189 USP17L12C9JPN9 530 aa20.54■□□□□ 0.88
MAP1LC3B-208ENST00000570189 USP17L21D6R901 530 aa20.54■□□□□ 0.88
MAP1LC3B-208ENST00000570189 ERC2O15083 957 aa20.54■□□□□ 0.88
MAP1LC3B-208ENST00000570189 ELNP15502 786 aa20.54■□□□□ 0.88
MAP1LC3B-208ENST00000570189 LRRFIP1Q32MZ4 808 aaKnown RBP20.54■□□□□ 0.88
MAP1LC3B-208ENST00000570189 SBK1Q52WX2 424 aa20.54■□□□□ 0.88
MAP1LC3B-208ENST00000570189 PI4K2BQ8TCG2 481 aa20.54■□□□□ 0.88
MAP1LC3B-208ENST00000570189 SLC4A4Q9Y6R1 1079 aa20.54■□□□□ 0.88
MAP1LC3B-208ENST00000570189 ROBO3Q96MS0 1386 aa20.54■□□□□ 0.88
MAP1LC3B-208ENST00000570189 ZNF236Q9UL36 1845 aa20.53■□□□□ 0.88
MAP1LC3B-208ENST00000570189 A0A1W2PRG0 241 aa20.53■□□□□ 0.88
MAP1LC3B-208ENST00000570189 RNF113AO15541 343 aaKnown RBP20.53■□□□□ 0.88
MAP1LC3B-208ENST00000570189 GLRX3O76003 335 aaKnown RBP20.53■□□□□ 0.88
MAP1LC3B-208ENST00000570189 MYCP01106 439 aaPredicted RBP20.53■□□□□ 0.88
MAP1LC3B-208ENST00000570189 HMGCRP04035 888 aa20.53■□□□□ 0.88
MAP1LC3B-208ENST00000570189 CDK8P49336 464 aa20.53■□□□□ 0.88
MAP1LC3B-208ENST00000570189 HDAC1Q13547 482 aaPredicted RBP20.53■□□□□ 0.88
MAP1LC3B-208ENST00000570189 CTR9Q6PD62 1173 aa20.53■□□□□ 0.88
MAP1LC3B-208ENST00000570189 SLC44A5Q8NCS7 719 aa20.53■□□□□ 0.88
MAP1LC3B-208ENST00000570189 U2AF1L4Q8WU68 220 aaKnown RBP20.53■□□□□ 0.88
MAP1LC3B-208ENST00000570189 LPAR1Q92633 364 aa20.53■□□□□ 0.88
MAP1LC3B-208ENST00000570189 USP6NLQ92738 828 aa20.53■□□□□ 0.88
MAP1LC3B-208ENST00000570189 DYNLL2Q96FJ2 89 aa20.53■□□□□ 0.88
MAP1LC3B-208ENST00000570189 UNC93B1Q9H1C4 597 aa20.53■□□□□ 0.88
MAP1LC3B-208ENST00000570189 CNMDO75829 334 aa20.52■□□□□ 0.88
MAP1LC3B-208ENST00000570189 SGPL1O95470 568 aa20.52■□□□□ 0.88
MAP1LC3B-208ENST00000570189 Q3C1V9 767 aa20.52■□□□□ 0.88
MAP1LC3B-208ENST00000570189 TRMT44Q8IYL2 757 aaKnown RBP20.52■□□□□ 0.88
MAP1LC3B-208ENST00000570189 OSBP2Q969R2 916 aa20.52■□□□□ 0.88
MAP1LC3B-208ENST00000570189 SH2D4AQ9H788 454 aa20.52■□□□□ 0.88
MAP1LC3B-208ENST00000570189 SPDYE16A6NNV3 312 aaPredicted RBP20.51■□□□□ 0.87
MAP1LC3B-208ENST00000570189 GSG1L2A8MUP6 293 aa20.51■□□□□ 0.87
MAP1LC3B-208ENST00000570189 GNAT2P19087 354 aa20.51■□□□□ 0.87
MAP1LC3B-208ENST00000570189 CCNA1P78396 465 aa20.51■□□□□ 0.87
MAP1LC3B-208ENST00000570189 ZYXQ15942 572 aaKnown RBP20.51■□□□□ 0.87
MAP1LC3B-208ENST00000570189 MORN1Q5T089 497 aa20.51■□□□□ 0.87
MAP1LC3B-208ENST00000570189 SIAH1Q8IUQ4 282 aa20.51■□□□□ 0.87
MAP1LC3B-208ENST00000570189 GCC1Q96CN9 775 aa20.51■□□□□ 0.87
MAP1LC3B-208ENST00000570189 NUDT12Q9BQG2 462 aa20.51■□□□□ 0.87
MAP1LC3B-208ENST00000570189 CRISPLD2Q9H0B8 497 aa20.51■□□□□ 0.87
MAP1LC3B-208ENST00000570189 RPAP3Q9H6T3 665 aaPredicted RBP20.51■□□□□ 0.87
MAP1LC3B-208ENST00000570189 TMX2Q9Y320 296 aa20.51■□□□□ 0.87
MAP1LC3B-208ENST00000570189 MPHOSPH10O00566 681 aaKnown RBP20.5■□□□□ 0.87
MAP1LC3B-208ENST00000570189 SLC34A2O95436 690 aa20.5■□□□□ 0.87
MAP1LC3B-208ENST00000570189 AKR1B1P15121 316 aa20.5■□□□□ 0.87
MAP1LC3B-208ENST00000570189 MX1P20591 662 aa20.5■□□□□ 0.87
MAP1LC3B-208ENST00000570189 ICA1Q05084 483 aa20.5■□□□□ 0.87
MAP1LC3B-208ENST00000570189 MAP3K21Q5TCX8 1036 aa20.5■□□□□ 0.87
MAP1LC3B-208ENST00000570189 TSHZ3Q63HK5 1081 aa20.5■□□□□ 0.87
MAP1LC3B-208ENST00000570189 GPR142Q7Z601 462 aa20.5■□□□□ 0.87
MAP1LC3B-208ENST00000570189 CRBNQ96SW2 442 aa20.5■□□□□ 0.87
MAP1LC3B-208ENST00000570189 PORCNQ9H237 461 aa20.5■□□□□ 0.87
MAP1LC3B-208ENST00000570189 ARHGEF10LQ9HCE6 1279 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms