RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 SPICE1Q8N0Z3 855 aa11.73□□□□□ -0.53
GTF3C1-212ENST00000570129 ASCC2Q9H1I8 757 aaPredicted RBP11.73□□□□□ -0.53
GTF3C1-212ENST00000570129 ZFYVE28Q9HCC9 887 aa11.73□□□□□ -0.53
GTF3C1-212ENST00000570129 TXNRD2Q9NNW7 524 aa11.73□□□□□ -0.53
GTF3C1-212ENST00000570129 NAV1Q8NEY1 1877 aa11.72□□□□□ -0.53
GTF3C1-212ENST00000570129 ZSWIM8A7E2V4 1837 aa11.72□□□□□ -0.53
GTF3C1-212ENST00000570129 CCDC171Q6TFL3 1326 aa11.72□□□□□ -0.53
GTF3C1-212ENST00000570129 USP17L10C9JJH3 530 aa11.72□□□□□ -0.53
GTF3C1-212ENST00000570129 TLR2O60603 784 aa11.72□□□□□ -0.53
GTF3C1-212ENST00000570129 EEF2P13639 858 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-212ENST00000570129 Q3C1V9 767 aa11.72□□□□□ -0.53
GTF3C1-212ENST00000570129 GIMAP6Q6P9H5 292 aa11.72□□□□□ -0.53
GTF3C1-212ENST00000570129 TBC1D10CQ8IV04 446 aa11.72□□□□□ -0.53
GTF3C1-212ENST00000570129 NUP88Q99567 741 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-212ENST00000570129 NAPBQ9H115 298 aa11.72□□□□□ -0.53
GTF3C1-212ENST00000570129 AGTPBP1Q9UPW5 1226 aa11.72□□□□□ -0.53
GTF3C1-212ENST00000570129 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.72□□□□□ -0.53
GTF3C1-212ENST00000570129 DOCK1Q14185 1865 aa11.72□□□□□ -0.53
GTF3C1-212ENST00000570129 IGKV6D-41A0A0C4DH26 115 aa11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 ALDH1A1P00352 501 aa11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 BCRP11274 1271 aa11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 GNAT2P19087 354 aa11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 SP3Q02447 781 aa11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 ALX1Q15699 326 aa11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 OTUD7BQ6GQQ9 843 aa11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 FASTKD5Q7L8L6 764 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 OTOP1Q7RTM1 612 aa11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 ANKRD13CQ8N6S4 541 aa11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 TRIM47Q96LD4 638 aa11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 MKNK2Q9HBH9 465 aa11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 CABP5Q9NP86 173 aa11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 IL17RBQ9NRM6 502 aa11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 DIAPH3Q9NSV4 1193 aa11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 FBXO28Q9NVF7 368 aa11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 ARPP21Q9UBL0 812 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 SWAP70Q9UH65 585 aa11.71□□□□□ -0.53
GTF3C1-212ENST00000570129 CNMDO75829 334 aa11.7□□□□□ -0.54
GTF3C1-212ENST00000570129 TFAP4Q01664 338 aa11.7□□□□□ -0.54
GTF3C1-212ENST00000570129 USP17L2Q6R6M4 530 aa11.7□□□□□ -0.54
GTF3C1-212ENST00000570129 SAMD1Q6SPF0 538 aaPredicted RBP11.7□□□□□ -0.54
GTF3C1-212ENST00000570129 DDRGK1Q96HY6 314 aa11.7□□□□□ -0.54
GTF3C1-212ENST00000570129 ABHD8Q96I13 439 aa11.7□□□□□ -0.54
GTF3C1-212ENST00000570129 FEZ1Q99689 392 aa11.7□□□□□ -0.54
GTF3C1-212ENST00000570129 KIAA1683Q9H0B3 1180 aa11.7□□□□□ -0.54
GTF3C1-212ENST00000570129 RBPJLQ9UBG7 517 aa11.7□□□□□ -0.54
GTF3C1-212ENST00000570129 CLIP2Q9UDT6 1046 aa11.7□□□□□ -0.54
GTF3C1-212ENST00000570129 GABRQQ9UN88 632 aa11.7□□□□□ -0.54
GTF3C1-212ENST00000570129 TRIM17Q9Y577 477 aa11.7□□□□□ -0.54
GTF3C1-212ENST00000570129 HTTP42858 3142 aa11.69□□□□□ -0.54
GTF3C1-212ENST00000570129 VCAM1P19320 739 aa11.69□□□□□ -0.54
GTF3C1-212ENST00000570129 LACTBP83111 547 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-212ENST00000570129 ICA1Q05084 483 aa11.69□□□□□ -0.54
GTF3C1-212ENST00000570129 LRRFIP1Q32MZ4 808 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-212ENST00000570129 RRP12Q5JTH9 1297 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-212ENST00000570129 TMEM179Q6ZVK1 233 aa11.69□□□□□ -0.54
GTF3C1-212ENST00000570129 CTU1Q7Z7A3 348 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-212ENST00000570129 PROCA1Q8NCQ7 364 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-212ENST00000570129 CEP95Q96GE4 821 aa11.69□□□□□ -0.54
GTF3C1-212ENST00000570129 NACAP1Q9BZK3 213 aa11.69□□□□□ -0.54
GTF3C1-212ENST00000570129 RPAP3Q9H6T3 665 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-212ENST00000570129 AS3MTQ9HBK9 375 aa11.69□□□□□ -0.54
GTF3C1-212ENST00000570129 TMOD4Q9NZQ9 345 aa11.69□□□□□ -0.54
GTF3C1-212ENST00000570129 ATAD5Q96QE3 1844 aa11.69□□□□□ -0.54
GTF3C1-212ENST00000570129 ROBO3Q96MS0 1386 aa11.68□□□□□ -0.54
GTF3C1-212ENST00000570129 NEDD4P46934 1319 aa11.68□□□□□ -0.54
GTF3C1-212ENST00000570129 C19orf81C9J6K1 198 aa11.68□□□□□ -0.54
GTF3C1-212ENST00000570129 RAD21O60216 631 aa11.68□□□□□ -0.54
GTF3C1-212ENST00000570129 MYCP01106 439 aaPredicted RBP11.68□□□□□ -0.54
GTF3C1-212ENST00000570129 NEFLP07196 543 aa11.68□□□□□ -0.54
GTF3C1-212ENST00000570129 CENPBP07199 599 aaPredicted RBP11.68□□□□□ -0.54
GTF3C1-212ENST00000570129 PSMC4P43686 418 aa11.68□□□□□ -0.54
GTF3C1-212ENST00000570129 CATSPERGQ6ZRH7 1159 aa11.68□□□□□ -0.54
GTF3C1-212ENST00000570129 ZNF444Q8N0Y2 327 aaPredicted RBP11.68□□□□□ -0.54
GTF3C1-212ENST00000570129 LRRC47Q8N1G4 583 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-212ENST00000570129 CCDC17Q96LX7 622 aa11.68□□□□□ -0.54
GTF3C1-212ENST00000570129 ZKSCAN3Q9BRR0 538 aa11.68□□□□□ -0.54
GTF3C1-212ENST00000570129 BTBD7Q9P203 1132 aa11.68□□□□□ -0.54
GTF3C1-212ENST00000570129 ANAPC4Q9UJX5 808 aa11.68□□□□□ -0.54
GTF3C1-212ENST00000570129 TMX2Q9Y320 296 aa11.68□□□□□ -0.54
GTF3C1-212ENST00000570129 PTPRFP10586 1907 aa11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 SGSM2O43147 1006 aa11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 RANBP6O60518 1105 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 FGRP09769 529 aa11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 TAL1P17542 331 aaPredicted RBP11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 HOXA7P31268 230 aaPredicted RBP11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 SNAP25P60880 206 aa11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 HERVK_113P62684 666 aa11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 NOM1Q5C9Z4 860 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 AMOTL1Q8IY63 956 aa11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 NEDD1Q8NHV4 660 aa11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 C12orf42Q96LP6 360 aa11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 PARK7Q99497 189 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 PAGR1Q9BTK6 254 aa11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 PORCNQ9H237 461 aa11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 EFCC1Q9HA90 598 aa11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 GINM1Q9NU53 330 aa11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 PPP4R2Q9NY27 417 aa11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 MTMR4Q9NYA4 1195 aa11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 HPS5Q9UPZ3 1129 aa11.67□□□□□ -0.54
GTF3C1-212ENST00000570129 MTMR7Q9Y216 660 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms