RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 GRIN3BO60391 1043 aa5.42□□□□□ -1.54
UBR1-211ENST00000569971 PAPLNO95428 1278 aa5.42□□□□□ -1.54
UBR1-211ENST00000569971 MAOBP27338 520 aa5.42□□□□□ -1.54
UBR1-211ENST00000569971 RPL6Q02878 288 aaKnown RBP5.42□□□□□ -1.54
UBR1-211ENST00000569971 CELF2-AS1Q8N7Q2 184 aa5.42□□□□□ -1.54
UBR1-211ENST00000569971 ST7Q9NRC1 585 aa5.42□□□□□ -1.54
UBR1-211ENST00000569971 ZNRF3Q9ULT6 936 aa5.42□□□□□ -1.54
UBR1-211ENST00000569971 POLR3KQ9Y2Y1 108 aaPredicted RBP5.42□□□□□ -1.54
UBR1-211ENST00000569971 PCDHB14Q9Y5E9 798 aa5.42□□□□□ -1.54
UBR1-211ENST00000569971 MRPL42Q9Y6G3 142 aaKnown RBP5.42□□□□□ -1.54
UBR1-211ENST00000569971 SBNO2Q9Y2G9 1366 aa5.42□□□□□ -1.54
UBR1-211ENST00000569971 TRIM37O94972 964 aa5.41□□□□□ -1.54
UBR1-211ENST00000569971 ECEL1O95672 775 aa5.41□□□□□ -1.54
UBR1-211ENST00000569971 TCEAL1Q15170 157 aa5.41□□□□□ -1.54
UBR1-211ENST00000569971 CYP27C1Q4G0S4 372 aa5.41□□□□□ -1.54
UBR1-211ENST00000569971 TNNI3KQ59H18 835 aa5.41□□□□□ -1.54
UBR1-211ENST00000569971 EGFLAMQ63HQ2 1017 aa5.41□□□□□ -1.54
UBR1-211ENST00000569971 OGFOD3Q6PK18 319 aa5.41□□□□□ -1.54
UBR1-211ENST00000569971 ZNF765Q7L2R6 523 aa5.41□□□□□ -1.54
UBR1-211ENST00000569971 ATG4DQ86TL0 474 aaPredicted RBP5.41□□□□□ -1.54
UBR1-211ENST00000569971 SHISA5Q8N114 240 aa5.41□□□□□ -1.54
UBR1-211ENST00000569971 BCL7CQ8WUZ0 217 aaPredicted RBP5.41□□□□□ -1.54
UBR1-211ENST00000569971 DEPDC7Q96QD5 511 aa5.41□□□□□ -1.54
UBR1-211ENST00000569971 TNKS2Q9H2K2 1166 aa5.41□□□□□ -1.54
UBR1-211ENST00000569971 EHMT1Q9H9B1 1298 aa5.41□□□□□ -1.54
UBR1-211ENST00000569971 SNTG2Q9NY99 539 aa5.41□□□□□ -1.54
UBR1-211ENST00000569971 PCDHA4Q9UN74 947 aa5.41□□□□□ -1.54
UBR1-211ENST00000569971 PPM1GO15355 546 aaPredicted RBP5.4□□□□□ -1.54
UBR1-211ENST00000569971 NFICP08651 508 aa5.4□□□□□ -1.54
UBR1-211ENST00000569971 INPP5AQ14642 412 aa5.4□□□□□ -1.54
UBR1-211ENST00000569971 AKAP4Q5JQC9 854 aa5.4□□□□□ -1.54
UBR1-211ENST00000569971 SCARA3Q6AZY7 606 aa5.4□□□□□ -1.54
UBR1-211ENST00000569971 RUFY4Q6ZNE9 571 aa5.4□□□□□ -1.54
UBR1-211ENST00000569971 GPBAR1Q8TDU6 330 aa5.4□□□□□ -1.54
UBR1-211ENST00000569971 CCDC86Q9H6F5 360 aaKnown RBP5.4□□□□□ -1.54
UBR1-211ENST00000569971 ANTXR1Q9H6X2 564 aa5.4□□□□□ -1.54
UBR1-211ENST00000569971 MKNK2Q9HBH9 465 aa5.4□□□□□ -1.54
UBR1-211ENST00000569971 C1GALT1Q9NS00 363 aa5.4□□□□□ -1.54
UBR1-211ENST00000569971 FAM105AQ9NUU6 356 aa5.4□□□□□ -1.54
UBR1-211ENST00000569971 CACNA2D2Q9NY47 1150 aa5.4□□□□□ -1.54
UBR1-211ENST00000569971 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.4□□□□□ -1.54
UBR1-211ENST00000569971 MYO15BQ96JP2 1530 aa5.39□□□□□ -1.55
UBR1-211ENST00000569971 GFRA2O00451 464 aa5.39□□□□□ -1.55
UBR1-211ENST00000569971 ATE1O95260 518 aa5.39□□□□□ -1.55
UBR1-211ENST00000569971 IMPDH2P12268 514 aa5.39□□□□□ -1.55
UBR1-211ENST00000569971 NCLP19338 710 aaKnown RBP5.39□□□□□ -1.55
UBR1-211ENST00000569971 RAB6AP20340 208 aa5.39□□□□□ -1.55
UBR1-211ENST00000569971 RASA3Q14644 834 aa5.39□□□□□ -1.55
UBR1-211ENST00000569971 PPP2R5EQ16537 467 aa5.39□□□□□ -1.55
UBR1-211ENST00000569971 DYMQ7RTS9 669 aa5.39□□□□□ -1.55
UBR1-211ENST00000569971 LSRQ86X29 649 aaPredicted RBP5.39□□□□□ -1.55
UBR1-211ENST00000569971 RBBP8NLQ8NC74 664 aaPredicted RBP5.39□□□□□ -1.55
UBR1-211ENST00000569971 OR6P1Q8NGX9 317 aa5.39□□□□□ -1.55
UBR1-211ENST00000569971 MICAL1Q8TDZ2 1067 aa5.39□□□□□ -1.55
UBR1-211ENST00000569971 ACSBG1Q96GR2 724 aa5.39□□□□□ -1.55
UBR1-211ENST00000569971 RNPC3Q96LT9 517 aaKnown RBP5.39□□□□□ -1.55
UBR1-211ENST00000569971 KRTAP4-9Q9BYQ8 210 aa5.39□□□□□ -1.55
UBR1-211ENST00000569971 PIDD1Q9HB75 910 aa5.39□□□□□ -1.55
UBR1-211ENST00000569971 ACTR10Q9NZ32 417 aa5.39□□□□□ -1.55
UBR1-211ENST00000569971 AP4E1Q9UPM8 1137 aa5.39□□□□□ -1.55
UBR1-211ENST00000569971 ZNF862O60290 1169 aa5.38□□□□□ -1.55
UBR1-211ENST00000569971 CTSBP07858 339 aa5.38□□□□□ -1.55
UBR1-211ENST00000569971 LIG1P18858 919 aa5.38□□□□□ -1.55
UBR1-211ENST00000569971 ASPAP45381 313 aa5.38□□□□□ -1.55
UBR1-211ENST00000569971 PLCL1Q15111 1095 aa5.38□□□□□ -1.55
UBR1-211ENST00000569971 ZNF792Q3KQV3 632 aa5.38□□□□□ -1.55
UBR1-211ENST00000569971 KRTAP19-4Q3LI73 84 aa5.38□□□□□ -1.55
UBR1-211ENST00000569971 WIPI1Q5MNZ9 446 aaPredicted RBP5.38□□□□□ -1.55
UBR1-211ENST00000569971 LARP1BQ659C4 914 aaKnown RBP5.38□□□□□ -1.55
UBR1-211ENST00000569971 LRFN4Q6PJG9 635 aa5.38□□□□□ -1.55
UBR1-211ENST00000569971 LRP10Q7Z4F1 713 aa5.38□□□□□ -1.55
UBR1-211ENST00000569971 WFDC3Q8IUB2 231 aa5.38□□□□□ -1.55
UBR1-211ENST00000569971 BHLHE22Q8NFJ8 381 aaPredicted RBP5.38□□□□□ -1.55
UBR1-211ENST00000569971 WDR89Q96FK6 387 aaPredicted RBP5.38□□□□□ -1.55
UBR1-211ENST00000569971 PLPPR2Q96GM1 343 aa5.38□□□□□ -1.55
UBR1-211ENST00000569971 DNAJC7Q99615 494 aa5.38□□□□□ -1.55
UBR1-211ENST00000569971 CCDC113Q9H0I3 377 aa5.38□□□□□ -1.55
UBR1-211ENST00000569971 LRRC4CQ9HCJ2 640 aa5.38□□□□□ -1.55
UBR1-211ENST00000569971 CORINQ9Y5Q5 1042 aa5.38□□□□□ -1.55
UBR1-211ENST00000569971 DBX1A6NMT0 343 aa5.37□□□□□ -1.55
UBR1-211ENST00000569971 AOC2O75106 756 aa5.37□□□□□ -1.55
UBR1-211ENST00000569971 HTR3BO95264 441 aa5.37□□□□□ -1.55
UBR1-211ENST00000569971 FUT4P22083 530 aa5.37□□□□□ -1.55
UBR1-211ENST00000569971 CASP7P55210 303 aa5.37□□□□□ -1.55
UBR1-211ENST00000569971 DDR2Q16832 855 aa5.37□□□□□ -1.55
UBR1-211ENST00000569971 LILRB2Q8N423 598 aa5.37□□□□□ -1.55
UBR1-211ENST00000569971 NETO1Q8TDF5 533 aa5.37□□□□□ -1.55
UBR1-211ENST00000569971 TMEM40Q8WWA1 233 aa5.37□□□□□ -1.55
UBR1-211ENST00000569971 ATXN3LQ9H3M9 355 aa5.37□□□□□ -1.55
UBR1-211ENST00000569971 KANSL2Q9H9L4 492 aa5.37□□□□□ -1.55
UBR1-211ENST00000569971 PICK1Q9NRD5 415 aa5.37□□□□□ -1.55
UBR1-211ENST00000569971 KRT82Q9NSB4 513 aa5.37□□□□□ -1.55
UBR1-211ENST00000569971 VAV3Q9UKW4 847 aa5.37□□□□□ -1.55
UBR1-211ENST00000569971 MSRB2Q9Y3D2 182 aa5.37□□□□□ -1.55
UBR1-211ENST00000569971 SNCAIPQ9Y6H5 919 aa5.37□□□□□ -1.55
UBR1-211ENST00000569971 A0A1W2PQH9 124 aa5.36□□□□□ -1.55
UBR1-211ENST00000569971 DCDC2CA8MYV0 355 aa5.36□□□□□ -1.55
UBR1-211ENST00000569971 FARP2O94887 1054 aaPredicted RBP5.36□□□□□ -1.55
UBR1-211ENST00000569971 HSD3B2P26439 372 aa5.36□□□□□ -1.55
UBR1-211ENST00000569971 CHMP4BP1P59074 171 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms