RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 PARP14Q460N5 1801 aa15.62■□□□□ 0.09
CNOT1-220ENST00000569916 MPHOSPH10O00566 681 aaKnown RBP15.62■□□□□ 0.09
CNOT1-220ENST00000569916 GNRH1P01148 92 aa15.62■□□□□ 0.09
CNOT1-220ENST00000569916 AKR1B1P15121 316 aa15.62■□□□□ 0.09
CNOT1-220ENST00000569916 OSBPP22059 807 aa15.62■□□□□ 0.09
CNOT1-220ENST00000569916 HOXA7P31268 230 aaPredicted RBP15.62■□□□□ 0.09
CNOT1-220ENST00000569916 PSMC4P43686 418 aa15.62■□□□□ 0.09
CNOT1-220ENST00000569916 CDK8P49336 464 aa15.62■□□□□ 0.09
CNOT1-220ENST00000569916 USP17L2Q6R6M4 530 aa15.62■□□□□ 0.09
CNOT1-220ENST00000569916 TMEM179Q6ZVK1 233 aa15.62■□□□□ 0.09
CNOT1-220ENST00000569916 PLEKHM2Q8IWE5 1019 aa15.62■□□□□ 0.09
CNOT1-220ENST00000569916 ACER1Q8TDN7 264 aa15.62■□□□□ 0.09
CNOT1-220ENST00000569916 TRIM47Q96LD4 638 aa15.62■□□□□ 0.09
CNOT1-220ENST00000569916 KIAA1683Q9H0B3 1180 aa15.62■□□□□ 0.09
CNOT1-220ENST00000569916 PTCH2Q9Y6C5 1203 aa15.62■□□□□ 0.09
CNOT1-220ENST00000569916 SOX10P56693 466 aa15.61■□□□□ 0.09
CNOT1-220ENST00000569916 ZYXQ15942 572 aaKnown RBP15.61■□□□□ 0.09
CNOT1-220ENST00000569916 FAM110CQ1W6H9 321 aa15.61■□□□□ 0.09
CNOT1-220ENST00000569916 ANKRD13CQ8N6S4 541 aa15.61■□□□□ 0.09
CNOT1-220ENST00000569916 OSBPL3Q9H4L5 887 aa15.61■□□□□ 0.09
CNOT1-220ENST00000569916 RLFQ13129 1914 aa15.6■□□□□ 0.09
CNOT1-220ENST00000569916 A0A0G2JMZ2 1700 aa15.6■□□□□ 0.09
CNOT1-220ENST00000569916 PLXNB2O15031 1838 aa15.6■□□□□ 0.09
CNOT1-220ENST00000569916 A0A1W2PRG0 241 aa15.6■□□□□ 0.09
CNOT1-220ENST00000569916 PATL2C9JE40 543 aaKnown RBP15.6■□□□□ 0.09
CNOT1-220ENST00000569916 GCLCP48506 637 aaPredicted RBP15.6■□□□□ 0.09
CNOT1-220ENST00000569916 TDO2P48775 406 aa15.6■□□□□ 0.09
CNOT1-220ENST00000569916 USP14P54578 494 aa15.6■□□□□ 0.09
CNOT1-220ENST00000569916 PRMT2P55345 433 aa15.6■□□□□ 0.09
CNOT1-220ENST00000569916 FCGRTP55899 365 aa15.6■□□□□ 0.09
CNOT1-220ENST00000569916 IRX3P78415 501 aaPredicted RBP15.6■□□□□ 0.09
CNOT1-220ENST00000569916 CCDC129Q6ZRS4 1044 aa15.6■□□□□ 0.09
CNOT1-220ENST00000569916 IFNL3Q8IZI9 196 aa15.6■□□□□ 0.09
CNOT1-220ENST00000569916 CCDC17Q96LX7 622 aa15.6■□□□□ 0.09
CNOT1-220ENST00000569916 SRRDQ9UH36 339 aa15.6■□□□□ 0.09
CNOT1-220ENST00000569916 MYH4Q9Y623 1939 aa15.59■□□□□ 0.09
CNOT1-220ENST00000569916 MINDY4BA8MYZ0 360 aa15.59■□□□□ 0.09
CNOT1-220ENST00000569916 FOXP2O15409 715 aa15.59■□□□□ 0.09
CNOT1-220ENST00000569916 FMNL1O95466 1100 aaPredicted RBP15.59■□□□□ 0.09
CNOT1-220ENST00000569916 APPP05067 770 aa15.59■□□□□ 0.09
CNOT1-220ENST00000569916 VCAM1P19320 739 aa15.59■□□□□ 0.09
CNOT1-220ENST00000569916 RGS19P49795 217 aa15.59■□□□□ 0.09
CNOT1-220ENST00000569916 CLEC10AQ8IUN9 316 aa15.59■□□□□ 0.09
CNOT1-220ENST00000569916 ARMC5Q96C12 935 aa15.59■□□□□ 0.09
CNOT1-220ENST00000569916 DOCK3Q8IZD9 2030 aa15.59■□□□□ 0.09
CNOT1-220ENST00000569916 MYPNQ86TC9 1320 aa15.59■□□□□ 0.09
CNOT1-220ENST00000569916 A0A0D9SFI3 127 aa15.58■□□□□ 0.08
CNOT1-220ENST00000569916 TRIM6-TRIM34B2RNG4 842 aa15.58■□□□□ 0.08
CNOT1-220ENST00000569916 HERVK_113P62684 666 aa15.58■□□□□ 0.08
CNOT1-220ENST00000569916 ICA1Q05084 483 aa15.58■□□□□ 0.08
CNOT1-220ENST00000569916 TICAM2Q86XR7 235 aa15.58■□□□□ 0.08
CNOT1-220ENST00000569916 SIAH1Q8IUQ4 282 aa15.58■□□□□ 0.08
CNOT1-220ENST00000569916 FAM227BQ96M60 508 aa15.58■□□□□ 0.08
CNOT1-220ENST00000569916 P2RX7Q99572 595 aaKnown RBP15.58■□□□□ 0.08
CNOT1-220ENST00000569916 MORF4L1Q9UBU8 362 aa15.58■□□□□ 0.08
CNOT1-220ENST00000569916 RASA1P20936 1047 aa15.57■□□□□ 0.08
CNOT1-220ENST00000569916 PDE4AP27815 886 aa15.57■□□□□ 0.08
CNOT1-220ENST00000569916 HOXD10P28358 340 aa15.57■□□□□ 0.08
CNOT1-220ENST00000569916 PRKCZQ05513 592 aa15.57■□□□□ 0.08
CNOT1-220ENST00000569916 SLC9C1Q4G0N8 1177 aa15.57■□□□□ 0.08
CNOT1-220ENST00000569916 STK11IPQ8N1F8 1099 aa15.57■□□□□ 0.08
CNOT1-220ENST00000569916 RILPL2Q969X0 211 aa15.57■□□□□ 0.08
CNOT1-220ENST00000569916 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.57■□□□□ 0.08
CNOT1-220ENST00000569916 NACAP1Q9BZK3 213 aa15.57■□□□□ 0.08
CNOT1-220ENST00000569916 NAPBQ9H115 298 aa15.57■□□□□ 0.08
CNOT1-220ENST00000569916 ARHGEF10LQ9HCE6 1279 aa15.57■□□□□ 0.08
CNOT1-220ENST00000569916 TXNRD2Q9NNW7 524 aa15.57■□□□□ 0.08
CNOT1-220ENST00000569916 HELLSQ9NRZ9 838 aa15.57■□□□□ 0.08
CNOT1-220ENST00000569916 LAMA4Q16363 1823 aa15.57■□□□□ 0.08
CNOT1-220ENST00000569916 CENPFP49454 3210 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 USP17L15C9J2P7 530 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 USP17L13C9JLJ4 530 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 USP17L11C9JVI0 530 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 USP17L18D6R9N7 530 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 USP17L22D6RA61 530 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 USP17L17D6RBQ6 530 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 USP17L19D6RCP7 530 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 USP17L20D6RJB6 530 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 PEX10O60683 326 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 USP17L24Q0WX57 530 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 NMIQ13287 307 aaPredicted RBP15.56■□□□□ 0.08
CNOT1-220ENST00000569916 KIAA1755Q5JYT7 1200 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 VPS53Q5VIR6 699 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 POTEEQ6S8J3 1075 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 CATSPERGQ6ZRH7 1159 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 GTF3C2Q8WUA4 911 aaPredicted RBP15.56■□□□□ 0.08
CNOT1-220ENST00000569916 ZNF333Q96JL9 665 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 RPAP3Q9H6T3 665 aaPredicted RBP15.56■□□□□ 0.08
CNOT1-220ENST00000569916 GABRQQ9UN88 632 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 TMX2Q9Y320 296 aa15.56■□□□□ 0.08
CNOT1-220ENST00000569916 COL11A1P12107 1806 aaPredicted RBP15.55■□□□□ 0.08
CNOT1-220ENST00000569916 TNPO2O14787 897 aaKnown RBP15.55■□□□□ 0.08
CNOT1-220ENST00000569916 PPARAQ07869 468 aa15.55■□□□□ 0.08
CNOT1-220ENST00000569916 MCMDC2Q4G0Z9 681 aa15.55■□□□□ 0.08
CNOT1-220ENST00000569916 SH3TC2Q8TF17 1288 aa15.55■□□□□ 0.08
CNOT1-220ENST00000569916 MKNK2Q9HBH9 465 aa15.55■□□□□ 0.08
CNOT1-220ENST00000569916 RBPJLQ9UBG7 517 aa15.55■□□□□ 0.08
CNOT1-220ENST00000569916 PLIN4Q96Q06 1357 aa15.54■□□□□ 0.08
CNOT1-220ENST00000569916 PRDM1O75626 825 aa15.54■□□□□ 0.08
CNOT1-220ENST00000569916 EEF2P13639 858 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms