RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 USP17L22D6RA61 530 aa15.9■□□□□ 0.14
SPG7-221ENST00000569720 USP17L17D6RBQ6 530 aa15.9■□□□□ 0.14
SPG7-221ENST00000569720 USP17L19D6RCP7 530 aa15.9■□□□□ 0.14
SPG7-221ENST00000569720 USP17L20D6RJB6 530 aa15.9■□□□□ 0.14
SPG7-221ENST00000569720 RAB11FIP3O75154 756 aa15.9■□□□□ 0.14
SPG7-221ENST00000569720 PDE6AP16499 860 aa15.9■□□□□ 0.14
SPG7-221ENST00000569720 USP17L24Q0WX57 530 aa15.9■□□□□ 0.14
SPG7-221ENST00000569720 ZYXQ15942 572 aaKnown RBP15.9■□□□□ 0.14
SPG7-221ENST00000569720 PAWRQ96IZ0 340 aaKnown RBP15.9■□□□□ 0.14
SPG7-221ENST00000569720 DNAJC2Q99543 621 aaKnown RBP15.9■□□□□ 0.14
SPG7-221ENST00000569720 TXNRD2Q9NNW7 524 aa15.9■□□□□ 0.14
SPG7-221ENST00000569720 DDX60LQ5H9U9 1706 aaKnown RBP15.9■□□□□ 0.14
SPG7-221ENST00000569720 GOLIM4O00461 696 aa15.89■□□□□ 0.13
SPG7-221ENST00000569720 XRCC5P13010 732 aaKnown RBP15.89■□□□□ 0.13
SPG7-221ENST00000569720 RGS2P41220 211 aa15.89■□□□□ 0.13
SPG7-221ENST00000569720 PLCD1P51178 756 aa15.89■□□□□ 0.13
SPG7-221ENST00000569720 CCNA1P78396 465 aa15.89■□□□□ 0.13
SPG7-221ENST00000569720 KIAA1683Q9H0B3 1180 aa15.89■□□□□ 0.13
SPG7-221ENST00000569720 BCL11AQ9H165 835 aa15.89■□□□□ 0.13
SPG7-221ENST00000569720 MCM9Q9NXL9 1143 aa15.89■□□□□ 0.13
SPG7-221ENST00000569720 COG6Q9Y2V7 657 aa15.89■□□□□ 0.13
SPG7-221ENST00000569720 RABGAP1Q9Y3P9 1069 aa15.89■□□□□ 0.13
SPG7-221ENST00000569720 PEX10O60683 326 aa15.88■□□□□ 0.13
SPG7-221ENST00000569720 GLRX3O76003 335 aaKnown RBP15.88■□□□□ 0.13
SPG7-221ENST00000569720 ZKSCAN1P17029 563 aaPredicted RBP15.88■□□□□ 0.13
SPG7-221ENST00000569720 SHMT1P34896 483 aa15.88■□□□□ 0.13
SPG7-221ENST00000569720 TRIM32Q13049 653 aa15.88■□□□□ 0.13
SPG7-221ENST00000569720 Q3C1V9 767 aa15.88■□□□□ 0.13
SPG7-221ENST00000569720 GPR142Q7Z601 462 aa15.88■□□□□ 0.13
SPG7-221ENST00000569720 PLEKHH3Q7Z736 793 aa15.88■□□□□ 0.13
SPG7-221ENST00000569720 TRIB2Q92519 343 aa15.88■□□□□ 0.13
SPG7-221ENST00000569720 ZBTB40Q9NUA8 1239 aa15.88■□□□□ 0.13
SPG7-221ENST00000569720 RBM27Q9P2N5 1060 aaKnown RBP15.88■□□□□ 0.13
SPG7-221ENST00000569720 ZNF532Q9HCE3 1301 aa15.88■□□□□ 0.13
SPG7-221ENST00000569720 ALPK3Q96L96 1907 aa15.88■□□□□ 0.13
SPG7-221ENST00000569720 MPHOSPH10O00566 681 aaKnown RBP15.87■□□□□ 0.13
SPG7-221ENST00000569720 CENPBP07199 599 aaPredicted RBP15.87■□□□□ 0.13
SPG7-221ENST00000569720 PRKAR2AP13861 404 aaKnown RBP15.87■□□□□ 0.13
SPG7-221ENST00000569720 CATSPERGQ6ZRH7 1159 aa15.87■□□□□ 0.13
SPG7-221ENST00000569720 NBPF3Q9H094 633 aa15.87■□□□□ 0.13
SPG7-221ENST00000569720 PORCNQ9H237 461 aa15.87■□□□□ 0.13
SPG7-221ENST00000569720 MYH7P12883 1935 aa15.87■□□□□ 0.13
SPG7-221ENST00000569720 VCAM1P19320 739 aa15.86■□□□□ 0.13
SPG7-221ENST00000569720 GABPAQ06546 454 aa15.86■□□□□ 0.13
SPG7-221ENST00000569720 MORN1Q5T089 497 aa15.86■□□□□ 0.13
SPG7-221ENST00000569720 ACER1Q8TDN7 264 aa15.86■□□□□ 0.13
SPG7-221ENST00000569720 APBA2Q99767 749 aa15.86■□□□□ 0.13
SPG7-221ENST00000569720 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.86■□□□□ 0.136e-6■■□□□ 14.1
SPG7-221ENST00000569720 PAG1Q9NWQ8 432 aa15.86■□□□□ 0.13
SPG7-221ENST00000569720 SEPT2Q15019 361 aa15.85■□□□□ 0.13
SPG7-221ENST00000569720 MAP3K21Q5TCX8 1036 aa15.85■□□□□ 0.13
SPG7-221ENST00000569720 WDR78Q5VTH9 848 aa15.85■□□□□ 0.13
SPG7-221ENST00000569720 LBX2Q6XYB7 198 aa15.85■□□□□ 0.13
SPG7-221ENST00000569720 SIRT2Q8IXJ6 389 aa15.85■□□□□ 0.13
SPG7-221ENST00000569720 AMOTL1Q8IY63 956 aa15.85■□□□□ 0.13
SPG7-221ENST00000569720 LCORLQ8N3X6 602 aa15.85■□□□□ 0.13
SPG7-221ENST00000569720 DIS3LQ8TF46 1054 aaKnown RBP15.85■□□□□ 0.13
SPG7-221ENST00000569720 SDR42E1Q8WUS8 393 aa15.85■□□□□ 0.13
SPG7-221ENST00000569720 USP6NLQ92738 828 aa15.85■□□□□ 0.13
SPG7-221ENST00000569720 DCP1AQ9NPI6 582 aaPredicted RBP15.85■□□□□ 0.13
SPG7-221ENST00000569720 SWAP70Q9UH65 585 aa15.85■□□□□ 0.13
SPG7-221ENST00000569720 RCAN3Q9UKA8 241 aa15.85■□□□□ 0.13
SPG7-221ENST00000569720 OGDHLQ9ULD0 1010 aa15.85■□□□□ 0.13
SPG7-221ENST00000569720 IVNS1ABPQ9Y6Y0 642 aa15.85■□□□□ 0.13
SPG7-221ENST00000569720 BAZ2AQ9UIF9 1905 aaKnown RBP15.84■□□□□ 0.13
SPG7-221ENST00000569720 A0A1W2PPC1 479 aa15.84■□□□□ 0.13
SPG7-221ENST00000569720 TCRBV5S4A2TA0A5A2 114 aa15.84■□□□□ 0.13
SPG7-221ENST00000569720 ATP5JP18859 108 aa15.84■□□□□ 0.13
SPG7-221ENST00000569720 CACNB2Q08289 660 aaPredicted RBP15.84■□□□□ 0.13
SPG7-221ENST00000569720 MAP2K5Q13163 448 aa15.84■□□□□ 0.13
SPG7-221ENST00000569720 EDC3Q96F86 508 aaKnown RBP15.84■□□□□ 0.13
SPG7-221ENST00000569720 DDRGK1Q96HY6 314 aa15.84■□□□□ 0.13
SPG7-221ENST00000569720 BOLA2Q9H3K6 86 aa15.84■□□□□ 0.13
SPG7-221ENST00000569720 C11orf49Q9H6J7 331 aa15.84■□□□□ 0.13
SPG7-221ENST00000569720 RPAP3Q9H6T3 665 aaPredicted RBP15.84■□□□□ 0.13
SPG7-221ENST00000569720 ARMT1Q9H993 441 aa15.84■□□□□ 0.13
SPG7-221ENST00000569720 SLC15A5A6NIM6 579 aa15.83■□□□□ 0.12
SPG7-221ENST00000569720 CNMDO75829 334 aa15.83■□□□□ 0.12
SPG7-221ENST00000569720 GUCY1A2P33402 732 aa15.83■□□□□ 0.12
SPG7-221ENST00000569720 ADD2P35612 726 aa15.83■□□□□ 0.12
SPG7-221ENST00000569720 ZSCAN25Q6NSZ9 544 aa15.83■□□□□ 0.12
SPG7-221ENST00000569720 TMEM179Q6ZVK1 233 aa15.83■□□□□ 0.12
SPG7-221ENST00000569720 PRO3102Q9H379 93 aa15.83■□□□□ 0.12
SPG7-221ENST00000569720 ATP8A2Q9NTI2 1148 aa15.83■□□□□ 0.12
SPG7-221ENST00000569720 HOXC10Q9NYD6 342 aa15.83■□□□□ 0.12
SPG7-221ENST00000569720 SPDYE16A6NNV3 312 aaPredicted RBP15.82■□□□□ 0.12
SPG7-221ENST00000569720 MBD4O95243 580 aa15.82■□□□□ 0.12
SPG7-221ENST00000569720 PTPREP23469 700 aa15.82■□□□□ 0.12
SPG7-221ENST00000569720 COG2Q14746 738 aa15.82■□□□□ 0.12
SPG7-221ENST00000569720 CCL14Q16627 93 aa15.82■□□□□ 0.12
SPG7-221ENST00000569720 MFSD14CQ5VZR4 134 aa15.82■□□□□ 0.12
SPG7-221ENST00000569720 POTEEQ6S8J3 1075 aa15.82■□□□□ 0.12
SPG7-221ENST00000569720 C7orf61Q8IZ16 206 aa15.82■□□□□ 0.12
SPG7-221ENST00000569720 HAUS7Q99871 368 aa15.82■□□□□ 0.12
SPG7-221ENST00000569720 LRRCC1Q9C099 1032 aa15.82■□□□□ 0.12
SPG7-221ENST00000569720 SH2D4AQ9H788 454 aa15.82■□□□□ 0.12
SPG7-221ENST00000569720 ARHGEF10LQ9HCE6 1279 aa15.82■□□□□ 0.12
SPG7-221ENST00000569720 RANBP2P49792 3224 aaKnown RBP15.82■□□□□ 0.12
SPG7-221ENST00000569720 CYP2D6P10635 497 aa15.81■□□□□ 0.12
SPG7-221ENST00000569720 FRMPD3Q5JV73 1810 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms