RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 MCMDC2Q4G0Z9 681 aa16.51■□□□□ 0.23
HERPUD1-218ENST00000569569 USP17L2Q6R6M4 530 aa16.51■□□□□ 0.23
HERPUD1-218ENST00000569569 CCDC129Q6ZRS4 1044 aa16.51■□□□□ 0.23
HERPUD1-218ENST00000569569 TMEM179Q6ZVK1 233 aa16.51■□□□□ 0.23
HERPUD1-218ENST00000569569 OTOP1Q7RTM1 612 aa16.51■□□□□ 0.23
HERPUD1-218ENST00000569569 EFCC1Q9HA90 598 aa16.51■□□□□ 0.23
HERPUD1-218ENST00000569569 TRIM17Q9Y577 477 aa16.51■□□□□ 0.23
HERPUD1-218ENST00000569569 AKR1B1P15121 316 aa16.5■□□□□ 0.23
HERPUD1-218ENST00000569569 SDSP20132 328 aa16.5■□□□□ 0.23
HERPUD1-218ENST00000569569 OSBPP22059 807 aa16.5■□□□□ 0.23
HERPUD1-218ENST00000569569 HOXA7P31268 230 aaPredicted RBP16.5■□□□□ 0.23
HERPUD1-218ENST00000569569 USP14P54578 494 aa16.5■□□□□ 0.23
HERPUD1-218ENST00000569569 LACTBP83111 547 aaPredicted RBP16.5■□□□□ 0.23
HERPUD1-218ENST00000569569 FBXO46Q6PJ61 603 aaPredicted RBP16.5■□□□□ 0.23
HERPUD1-218ENST00000569569 SMCR8Q8TEV9 937 aaPredicted RBP16.5■□□□□ 0.23
HERPUD1-218ENST00000569569 FAM227BQ96M60 508 aa16.5■□□□□ 0.23
HERPUD1-218ENST00000569569 FEZ1Q99689 392 aa16.5■□□□□ 0.23
HERPUD1-218ENST00000569569 NAPBQ9H115 298 aa16.5■□□□□ 0.23
HERPUD1-218ENST00000569569 ZSWIM8A7E2V4 1837 aa16.49■□□□□ 0.23
HERPUD1-218ENST00000569569 A0A0D9SFI3 127 aa16.49■□□□□ 0.23
HERPUD1-218ENST00000569569 BCRP11274 1271 aa16.49■□□□□ 0.23
HERPUD1-218ENST00000569569 NMIQ13287 307 aaPredicted RBP16.49■□□□□ 0.23
HERPUD1-218ENST00000569569 ACER1Q8TDN7 264 aa16.49■□□□□ 0.23
HERPUD1-218ENST00000569569 C12orf42Q96LP6 360 aa16.49■□□□□ 0.23
HERPUD1-218ENST00000569569 KIAA1683Q9H0B3 1180 aa16.49■□□□□ 0.23
HERPUD1-218ENST00000569569 MKNK2Q9HBH9 465 aa16.49■□□□□ 0.23
HERPUD1-218ENST00000569569 ZNF287Q9HBT7 754 aa16.49■□□□□ 0.23
HERPUD1-218ENST00000569569 EMILIN3Q9NT22 766 aa16.49■□□□□ 0.23
HERPUD1-218ENST00000569569 ROBO3Q96MS0 1386 aa16.49■□□□□ 0.23
HERPUD1-218ENST00000569569 GREB1LQ9C091 1923 aaPredicted RBP16.49■□□□□ 0.23
HERPUD1-218ENST00000569569 MYH4Q9Y623 1939 aa16.49■□□□□ 0.23
HERPUD1-218ENST00000569569 HIP1O00291 1037 aa16.48■□□□□ 0.23
HERPUD1-218ENST00000569569 CAP1Q01518 475 aa16.48■□□□□ 0.23
HERPUD1-218ENST00000569569 STK11IPQ8N1F8 1099 aa16.48■□□□□ 0.23
HERPUD1-218ENST00000569569 ASCC2Q9H1I8 757 aaPredicted RBP16.48■□□□□ 0.23
HERPUD1-218ENST00000569569 CAPN15O75808 1086 aa16.47■□□□□ 0.23
HERPUD1-218ENST00000569569 GNRH1P01148 92 aa16.47■□□□□ 0.23
HERPUD1-218ENST00000569569 SLC3A2P08195 630 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-218ENST00000569569 GCLCP48506 637 aaPredicted RBP16.47■□□□□ 0.23
HERPUD1-218ENST00000569569 MFAP1P55081 439 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-218ENST00000569569 IRX3P78415 501 aaPredicted RBP16.47■□□□□ 0.23
HERPUD1-218ENST00000569569 ZYXQ15942 572 aaKnown RBP16.47■□□□□ 0.23
HERPUD1-218ENST00000569569 TTC22Q5TAA0 569 aa16.47■□□□□ 0.23
HERPUD1-218ENST00000569569 ARHGEF10LQ9HCE6 1279 aa16.47■□□□□ 0.23
HERPUD1-218ENST00000569569 PTPN22Q9Y2R2 807 aa16.47■□□□□ 0.23
HERPUD1-218ENST00000569569 A0A1W2PRG0 241 aa16.46■□□□□ 0.23
HERPUD1-218ENST00000569569 CCDC85CA6NKD9 419 aa16.46■□□□□ 0.23
HERPUD1-218ENST00000569569 FOXP2O15409 715 aa16.46■□□□□ 0.23
HERPUD1-218ENST00000569569 RASA1P20936 1047 aa16.46■□□□□ 0.23
HERPUD1-218ENST00000569569 PSMC4P43686 418 aa16.46■□□□□ 0.23
HERPUD1-218ENST00000569569 ICA1Q05084 483 aa16.46■□□□□ 0.23
HERPUD1-218ENST00000569569 PDE4BQ07343 736 aa16.46■□□□□ 0.23
HERPUD1-218ENST00000569569 PPARAQ07869 468 aa16.46■□□□□ 0.23
HERPUD1-218ENST00000569569 ALX1Q15699 326 aa16.46■□□□□ 0.23
HERPUD1-218ENST00000569569 VPS53Q5VIR6 699 aa16.46■□□□□ 0.23
HERPUD1-218ENST00000569569 ZNF444Q8N0Y2 327 aaPredicted RBP16.46■□□□□ 0.23
HERPUD1-218ENST00000569569 ARHGAP39Q9C0H5 1083 aa16.46■□□□□ 0.23
HERPUD1-218ENST00000569569 KANSL2Q9H9L4 492 aa16.46■□□□□ 0.23
HERPUD1-218ENST00000569569 DIAPH3Q9NSV4 1193 aa16.46■□□□□ 0.23
HERPUD1-218ENST00000569569 HPS5Q9UPZ3 1129 aa16.46■□□□□ 0.23
HERPUD1-218ENST00000569569 CCDC171Q6TFL3 1326 aa16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 USP17L15C9J2P7 530 aa16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 USP17L13C9JLJ4 530 aa16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 USP17L11C9JVI0 530 aa16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 USP17L18D6R9N7 530 aa16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 USP17L22D6RA61 530 aa16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 USP17L17D6RBQ6 530 aa16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 USP17L19D6RCP7 530 aa16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 USP17L20D6RJB6 530 aa16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 HSPD1P10809 573 aaKnown RBP16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 GSPT1P15170 499 aaKnown RBP16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 USP17L24Q0WX57 530 aa16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 FAM110CQ1W6H9 321 aa16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 CWC27Q6UX04 472 aaKnown RBP16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 CENPQQ7L2Z9 268 aaPredicted RBP16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 ZNF589Q86UQ0 364 aaPredicted RBP16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 SIAH1Q8IUQ4 282 aa16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 ANKRD13CQ8N6S4 541 aa16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 P2RX7Q99572 595 aaKnown RBP16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 SH2D4AQ9H788 454 aa16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 TMX2Q9Y320 296 aa16.45■□□□□ 0.22
HERPUD1-218ENST00000569569 FMNL1O95466 1100 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-218ENST00000569569 FGAP02671 866 aa16.44■□□□□ 0.22
HERPUD1-218ENST00000569569 VCAM1P19320 739 aa16.44■□□□□ 0.22
HERPUD1-218ENST00000569569 HOXD10P28358 340 aa16.44■□□□□ 0.22
HERPUD1-218ENST00000569569 CTGFP29279 349 aa16.44■□□□□ 0.22
HERPUD1-218ENST00000569569 PRMT2P55345 433 aa16.44■□□□□ 0.22
HERPUD1-218ENST00000569569 FCGRTP55899 365 aa16.44■□□□□ 0.22
HERPUD1-218ENST00000569569 CATSPERGQ6ZRH7 1159 aa16.44■□□□□ 0.22
HERPUD1-218ENST00000569569 GTF3C2Q8WUA4 911 aaPredicted RBP16.44■□□□□ 0.22
HERPUD1-218ENST00000569569 PRDM1O75626 825 aa16.43■□□□□ 0.22
HERPUD1-218ENST00000569569 ECM2O94769 699 aaPredicted RBP16.43■□□□□ 0.22
HERPUD1-218ENST00000569569 EEF2P13639 858 aaKnown RBP16.43■□□□□ 0.22
HERPUD1-218ENST00000569569 HERVK_113P62684 666 aa16.43■□□□□ 0.22
HERPUD1-218ENST00000569569 CLEC10AQ8IUN9 316 aa16.43■□□□□ 0.22
HERPUD1-218ENST00000569569 TRIM47Q96LD4 638 aa16.43■□□□□ 0.22
HERPUD1-218ENST00000569569 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.43■□□□□ 0.22
HERPUD1-218ENST00000569569 ANAPC4Q9UJX5 808 aa16.43■□□□□ 0.22
HERPUD1-218ENST00000569569 RLFQ13129 1914 aa16.43■□□□□ 0.22
HERPUD1-218ENST00000569569 ZMYM6O95789 1325 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms