RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 USP17L12C9JPN9 530 aa16.42■□□□□ 0.22
NEIL1-220ENST00000568881 USP17L21D6R901 530 aa16.42■□□□□ 0.22
NEIL1-220ENST00000568881 GPAA1O43292 621 aa16.42■□□□□ 0.22
NEIL1-220ENST00000568881 FMNL1O95466 1100 aaPredicted RBP16.42■□□□□ 0.22
NEIL1-220ENST00000568881 TDO2P48775 406 aa16.42■□□□□ 0.22
NEIL1-220ENST00000568881 FCGRTP55899 365 aa16.42■□□□□ 0.22
NEIL1-220ENST00000568881 SOX10P56693 466 aa16.42■□□□□ 0.22
NEIL1-220ENST00000568881 ZMYM1Q5SVZ6 1142 aa16.42■□□□□ 0.22
NEIL1-220ENST00000568881 C12orf60Q5U649 245 aa16.42■□□□□ 0.22
NEIL1-220ENST00000568881 TMEM179Q6ZVK1 233 aa16.42■□□□□ 0.22
NEIL1-220ENST00000568881 OSBP2Q969R2 916 aa16.42■□□□□ 0.22
NEIL1-220ENST00000568881 ARHGAP39Q9C0H5 1083 aa16.42■□□□□ 0.22
NEIL1-220ENST00000568881 SH2D4AQ9H788 454 aa16.42■□□□□ 0.22
NEIL1-220ENST00000568881 ADGRA2Q96PE1 1338 aa16.42■□□□□ 0.22
NEIL1-220ENST00000568881 LOC285556D6RIA3 1793 aa16.41■□□□□ 0.22
NEIL1-220ENST00000568881 CTGFP29279 349 aa16.41■□□□□ 0.22
NEIL1-220ENST00000568881 PSMC4P43686 418 aa16.41■□□□□ 0.22
NEIL1-220ENST00000568881 SBK1Q52WX2 424 aa16.41■□□□□ 0.22
NEIL1-220ENST00000568881 TREML2Q5T2D2 321 aa16.41■□□□□ 0.22
NEIL1-220ENST00000568881 ARHGEF10LQ9HCE6 1279 aa16.41■□□□□ 0.22
NEIL1-220ENST00000568881 HELLSQ9NRZ9 838 aa16.41■□□□□ 0.22
NEIL1-220ENST00000568881 PATL2C9JE40 543 aaKnown RBP16.4■□□□□ 0.22
NEIL1-220ENST00000568881 SLC3A2P08195 630 aaKnown RBP16.4■□□□□ 0.22
NEIL1-220ENST00000568881 BCRP11274 1271 aa16.4■□□□□ 0.22
NEIL1-220ENST00000568881 HOXA7P31268 230 aaPredicted RBP16.4■□□□□ 0.22
NEIL1-220ENST00000568881 RGS19P49795 217 aa16.4■□□□□ 0.22
NEIL1-220ENST00000568881 FAM110CQ1W6H9 321 aa16.4■□□□□ 0.22
NEIL1-220ENST00000568881 CTR9Q6PD62 1173 aa16.4■□□□□ 0.22
NEIL1-220ENST00000568881 C16orf86Q6ZW13 317 aa16.4■□□□□ 0.22
NEIL1-220ENST00000568881 KIAA1683Q9H0B3 1180 aa16.4■□□□□ 0.22
NEIL1-220ENST00000568881 ASCC2Q9H1I8 757 aaPredicted RBP16.4■□□□□ 0.22
NEIL1-220ENST00000568881 CENPFP49454 3210 aa16.4■□□□□ 0.22
NEIL1-220ENST00000568881 SMIM22K7EJ46 135 aa16.39■□□□□ 0.21
NEIL1-220ENST00000568881 CYP2D6P10635 497 aa16.39■□□□□ 0.21
NEIL1-220ENST00000568881 CDK8P49336 464 aa16.39■□□□□ 0.21
NEIL1-220ENST00000568881 MFAP1P55081 439 aaKnown RBP16.39■□□□□ 0.21
NEIL1-220ENST00000568881 NMIQ13287 307 aaPredicted RBP16.39■□□□□ 0.21
NEIL1-220ENST00000568881 SLC9C1Q4G0N8 1177 aa16.39■□□□□ 0.21
NEIL1-220ENST00000568881 MCMDC2Q4G0Z9 681 aa16.39■□□□□ 0.21
NEIL1-220ENST00000568881 C12orf42Q96LP6 360 aa16.39■□□□□ 0.21
NEIL1-220ENST00000568881 FAM227BQ96M60 508 aa16.39■□□□□ 0.21
NEIL1-220ENST00000568881 SEC62Q99442 399 aaKnown RBP16.39■□□□□ 0.21
NEIL1-220ENST00000568881 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.21
NEIL1-220ENST00000568881 GSG1L2A8MUP6 293 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 MINDY4BA8MYZ0 360 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 USP17L15C9J2P7 530 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 USP17L13C9JLJ4 530 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 USP17L11C9JVI0 530 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 USP17L18D6R9N7 530 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 USP17L22D6RA61 530 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 USP17L17D6RBQ6 530 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 USP17L19D6RCP7 530 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 USP17L20D6RJB6 530 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 M0R2C6 588 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 USP17L24Q0WX57 530 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 SEPT2Q15019 361 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 ZYXQ15942 572 aaKnown RBP16.38■□□□□ 0.21
NEIL1-220ENST00000568881 CWC27Q6UX04 472 aaKnown RBP16.38■□□□□ 0.21
NEIL1-220ENST00000568881 ANKRD13CQ8N6S4 541 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 RAET1EQ8TD07 263 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 RUFY2Q8WXA3 655 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 COA7Q96BR5 231 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 DYNLL2Q96FJ2 89 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 NAPBQ9H115 298 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 SRRDQ9UH36 339 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 BRCA2P51587 3418 aa16.38■□□□□ 0.21
NEIL1-220ENST00000568881 MYH8P13535 1937 aa16.37■□□□□ 0.21
NEIL1-220ENST00000568881 BAZ2AQ9UIF9 1905 aaKnown RBP16.37■□□□□ 0.21
NEIL1-220ENST00000568881 A0A0D9SFI3 127 aa16.37■□□□□ 0.21
NEIL1-220ENST00000568881 TNPO2O14787 897 aaKnown RBP16.37■□□□□ 0.21
NEIL1-220ENST00000568881 CHMLP26374 656 aa16.37■□□□□ 0.21
NEIL1-220ENST00000568881 ICA1Q05084 483 aa16.37■□□□□ 0.21
NEIL1-220ENST00000568881 CCAR1Q8IX12 1150 aaKnown RBP16.37■□□□□ 0.21
NEIL1-220ENST00000568881 IFNL3Q8IZI9 196 aa16.37■□□□□ 0.21
NEIL1-220ENST00000568881 TRIM47Q96LD4 638 aa16.37■□□□□ 0.21
NEIL1-220ENST00000568881 MYPNQ86TC9 1320 aa16.37■□□□□ 0.21
NEIL1-220ENST00000568881 HERVK_113P62684 666 aa16.36■□□□□ 0.21
NEIL1-220ENST00000568881 PDE4BQ07343 736 aa16.36■□□□□ 0.21
NEIL1-220ENST00000568881 CASC1Q6TDU7 716 aa16.36■□□□□ 0.21
NEIL1-220ENST00000568881 SLC44A5Q8NCS7 719 aa16.36■□□□□ 0.21
NEIL1-220ENST00000568881 LPAR1Q92633 364 aa16.36■□□□□ 0.21
NEIL1-220ENST00000568881 KANSL2Q9H9L4 492 aa16.36■□□□□ 0.21
NEIL1-220ENST00000568881 EMILIN3Q9NT22 766 aa16.36■□□□□ 0.21
NEIL1-220ENST00000568881 PTCH2Q9Y6C5 1203 aa16.36■□□□□ 0.21
NEIL1-220ENST00000568881 CYP2D7A0A087X1C5 515 aa16.35■□□□□ 0.21
NEIL1-220ENST00000568881 CCDC129Q6ZRS4 1044 aa16.35■□□□□ 0.21
NEIL1-220ENST00000568881 ZNF444Q8N0Y2 327 aaPredicted RBP16.35■□□□□ 0.21
NEIL1-220ENST00000568881 ARMC5Q96C12 935 aa16.35■□□□□ 0.21
NEIL1-220ENST00000568881 TMEM106CQ9BVX2 250 aa16.35■□□□□ 0.21
NEIL1-220ENST00000568881 CWC22Q9HCG8 908 aaKnown RBP16.35■□□□□ 0.21
NEIL1-220ENST00000568881 MORF4L1Q9UBU8 362 aa16.35■□□□□ 0.21
NEIL1-220ENST00000568881 CCDC171Q6TFL3 1326 aa16.35■□□□□ 0.21
NEIL1-220ENST00000568881 ROBO3Q96MS0 1386 aa16.35■□□□□ 0.21
NEIL1-220ENST00000568881 CDC45O75419 566 aa16.34■□□□□ 0.21
NEIL1-220ENST00000568881 AKR1B1P15121 316 aa16.34■□□□□ 0.21
NEIL1-220ENST00000568881 VCAM1P19320 739 aa16.34■□□□□ 0.21
NEIL1-220ENST00000568881 CCNA1P78396 465 aa16.34■□□□□ 0.21
NEIL1-220ENST00000568881 PPP4R3BQ5MIZ7 849 aa16.34■□□□□ 0.21
NEIL1-220ENST00000568881 GPRC5AQ8NFJ5 357 aa16.34■□□□□ 0.21
NEIL1-220ENST00000568881 ACER1Q8TDN7 264 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms