RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 USP50Q70EL3 339 aaPredicted RBP7.53□□□□□ -1.2
CDH13-211ENST00000568770 SND1Q7KZF4 910 aaKnown RBP eCLIP7.53□□□□□ -1.2
CDH13-211ENST00000568770 SAPCD2Q86UD0 394 aa7.53□□□□□ -1.2
CDH13-211ENST00000568770 CMTR1Q8N1G2 835 aaKnown RBP7.53□□□□□ -1.2
CDH13-211ENST00000568770 SLC30A3Q99726 388 aa7.53□□□□□ -1.2
CDH13-211ENST00000568770 COL25A1Q9BXS0 654 aaPredicted RBP7.53□□□□□ -1.2
CDH13-211ENST00000568770 POLIQ9UNA4 740 aa7.53□□□□□ -1.2
CDH13-211ENST00000568770 KCNH4Q9UQ05 1017 aa7.53□□□□□ -1.2
CDH13-211ENST00000568770 LAMB2P55268 1798 aa7.53□□□□□ -1.2
CDH13-211ENST00000568770 TAF1P21675 1872 aa7.52□□□□□ -1.21
CDH13-211ENST00000568770 CEMIPQ8WUJ3 1361 aa7.52□□□□□ -1.21
CDH13-211ENST00000568770 A6NHS1 94 aa7.52□□□□□ -1.21
CDH13-211ENST00000568770 PDGFAP04085 211 aa7.52□□□□□ -1.21
CDH13-211ENST00000568770 HSPA5P11021 654 aaKnown RBP7.52□□□□□ -1.21
CDH13-211ENST00000568770 AAMPQ13685 434 aa7.52□□□□□ -1.21
CDH13-211ENST00000568770 TRERF1Q96PN7 1200 aa7.52□□□□□ -1.21
CDH13-211ENST00000568770 MARK1Q9P0L2 795 aa7.52□□□□□ -1.21
CDH13-211ENST00000568770 DLG5Q8TDM6 1919 aa7.52□□□□□ -1.21
CDH13-211ENST00000568770 COL3A1P02461 1466 aaPredicted RBP7.51□□□□□ -1.21
CDH13-211ENST00000568770 CELF2O95319 508 aaKnown RBP7.51□□□□□ -1.21
CDH13-211ENST00000568770 HLFQ16534 295 aa7.51□□□□□ -1.21
CDH13-211ENST00000568770 CRY2Q49AN0 593 aa7.51□□□□□ -1.21
CDH13-211ENST00000568770 CIAPIN1Q6FI81 312 aa7.51□□□□□ -1.21
CDH13-211ENST00000568770 ALKBH2Q6NS38 261 aa7.51□□□□□ -1.21
CDH13-211ENST00000568770 FOXR1Q6PIV2 292 aa7.51□□□□□ -1.21
CDH13-211ENST00000568770 RAB44Q7Z6P3 723 aaPredicted RBP7.51□□□□□ -1.21
CDH13-211ENST00000568770 SLC51AQ86UW1 340 aa7.51□□□□□ -1.21
CDH13-211ENST00000568770 GSX2Q9BZM3 304 aa7.51□□□□□ -1.21
CDH13-211ENST00000568770 GPRC5DQ9NZD1 345 aa7.51□□□□□ -1.21
CDH13-211ENST00000568770 ANKRD36CQ5JPF3 1778 aa7.51□□□□□ -1.21
CDH13-211ENST00000568770 ABCC12Q96J65 1359 aa7.5□□□□□ -1.21
CDH13-211ENST00000568770 U2SURPO15042 1029 aaKnown RBP7.5□□□□□ -1.21
CDH13-211ENST00000568770 WFS1O76024 890 aa7.5□□□□□ -1.21
CDH13-211ENST00000568770 SNRPA1P09661 255 aaKnown RBP7.5□□□□□ -1.21
CDH13-211ENST00000568770 MZF1P28698 734 aaPredicted RBP7.5□□□□□ -1.21
CDH13-211ENST00000568770 GMPRP36959 345 aa7.5□□□□□ -1.21
CDH13-211ENST00000568770 LAMC2Q13753 1193 aa7.5□□□□□ -1.21
CDH13-211ENST00000568770 PIK3R5Q8WYR1 880 aa7.5□□□□□ -1.21
CDH13-211ENST00000568770 RPGRQ92834 1020 aaKnown RBP7.5□□□□□ -1.21
CDH13-211ENST00000568770 IRF7Q92985 503 aa7.5□□□□□ -1.21
CDH13-211ENST00000568770 HHIPL1Q96JK4 782 aa7.5□□□□□ -1.21
CDH13-211ENST00000568770 GLIS2Q9BZE0 524 aaPredicted RBP7.5□□□□□ -1.21
CDH13-211ENST00000568770 ADARB2Q9NS39 739 aaKnown RBP7.5□□□□□ -1.21
CDH13-211ENST00000568770 PHF24Q9UPV7 400 aa7.5□□□□□ -1.21
CDH13-211ENST00000568770 CENPFP49454 3210 aa7.49□□□□□ -1.21
CDH13-211ENST00000568770 TCERG1O14776 1098 aaKnown RBP7.49□□□□□ -1.21
CDH13-211ENST00000568770 XYLBO75191 536 aa7.49□□□□□ -1.21
CDH13-211ENST00000568770 SASH3O75995 380 aa7.49□□□□□ -1.21
CDH13-211ENST00000568770 TARSP26639 723 aaKnown RBP7.49□□□□□ -1.21
CDH13-211ENST00000568770 SOX10P56693 466 aa7.49□□□□□ -1.21
CDH13-211ENST00000568770 SPEM2Q0P670 501 aa7.49□□□□□ -1.21
CDH13-211ENST00000568770 CC2D1BQ5T0F9 858 aaKnown RBP7.49□□□□□ -1.21
CDH13-211ENST00000568770 TREML4Q6UXN2 200 aa7.49□□□□□ -1.21
CDH13-211ENST00000568770 NIM1KQ8IY84 436 aa7.49□□□□□ -1.21
CDH13-211ENST00000568770 PHACTR3Q96KR7 559 aa7.49□□□□□ -1.21
CDH13-211ENST00000568770 CNTNAP3BQ96NU0 1288 aa7.49□□□□□ -1.21
CDH13-211ENST00000568770 CNTNAP3Q9BZ76 1288 aa7.49□□□□□ -1.21
CDH13-211ENST00000568770 NYXQ9GZU5 481 aa7.49□□□□□ -1.21
CDH13-211ENST00000568770 ZNF408Q9H9D4 720 aa7.49□□□□□ -1.21
CDH13-211ENST00000568770 KLF15Q9UIH9 416 aa7.49□□□□□ -1.21
CDH13-211ENST00000568770 KDM3BQ7LBC6 1761 aa7.48□□□□□ -1.21
CDH13-211ENST00000568770 MKI67P46013 3256 aaKnown RBP7.48□□□□□ -1.21
CDH13-211ENST00000568770 PPIP5K2O43314 1243 aa7.48□□□□□ -1.21
CDH13-211ENST00000568770 IGHA2P01877 340 aa7.48□□□□□ -1.21
CDH13-211ENST00000568770 MX2P20592 715 aa7.48□□□□□ -1.21
CDH13-211ENST00000568770 HOXA10P31260 410 aaPredicted RBP7.48□□□□□ -1.21
CDH13-211ENST00000568770 GMPSP49915 693 aaPredicted RBP7.48□□□□□ -1.21
CDH13-211ENST00000568770 CXCL9Q07325 125 aa7.48□□□□□ -1.21
CDH13-211ENST00000568770 AOC3Q16853 763 aa7.48□□□□□ -1.21
CDH13-211ENST00000568770 RIC1Q4ADV7 1423 aa7.48□□□□□ -1.21
CDH13-211ENST00000568770 KRT25Q7Z3Z0 450 aa7.48□□□□□ -1.21
CDH13-211ENST00000568770 NGEFQ8N5V2 710 aa7.48□□□□□ -1.21
CDH13-211ENST00000568770 ZFATQ9P243 1243 aa7.48□□□□□ -1.21
CDH13-211ENST00000568770 PGAP2Q9UHJ9 254 aa7.48□□□□□ -1.21
CDH13-211ENST00000568770 BRPF3Q9ULD4 1205 aa7.48□□□□□ -1.21
CDH13-211ENST00000568770 KIF7Q2M1P5 1343 aa7.48□□□□□ -1.21
CDH13-211ENST00000568770 NPC1L1Q9UHC9 1359 aa7.47□□□□□ -1.21
CDH13-211ENST00000568770 EGFRP00533 1210 aa7.47□□□□□ -1.21
CDH13-211ENST00000568770 EPB42P16452 691 aa7.47□□□□□ -1.21
CDH13-211ENST00000568770 MARSP56192 900 aaKnown RBP7.47□□□□□ -1.21
CDH13-211ENST00000568770 NOGQ13253 232 aa7.47□□□□□ -1.21
CDH13-211ENST00000568770 C8orf34Q49A92 452 aa7.47□□□□□ -1.21
CDH13-211ENST00000568770 MCM10Q7L590 875 aa7.47□□□□□ -1.21
CDH13-211ENST00000568770 GJD3Q8N144 294 aa7.47□□□□□ -1.21
CDH13-211ENST00000568770 RBM17Q96I25 401 aaKnown RBP7.47□□□□□ -1.21
CDH13-211ENST00000568770 CRAMP1Q96RY5 1269 aa7.47□□□□□ -1.21
CDH13-211ENST00000568770 MBIPQ9NS73 344 aa7.47□□□□□ -1.21
CDH13-211ENST00000568770 DCTN4Q9UJW0 460 aa7.47□□□□□ -1.21
CDH13-211ENST00000568770 ZNRF3Q9ULT6 936 aa7.47□□□□□ -1.21
CDH13-211ENST00000568770 ERVV-1B6SEH8 477 aa7.46□□□□□ -1.22
CDH13-211ENST00000568770 BMP4P12644 408 aa7.46□□□□□ -1.22
CDH13-211ENST00000568770 GPTP24298 496 aa7.46□□□□□ -1.22
CDH13-211ENST00000568770 MAPK1P28482 360 aa7.46□□□□□ -1.22
CDH13-211ENST00000568770 PRKAR2BP31323 418 aa7.46□□□□□ -1.22
CDH13-211ENST00000568770 HUNKP57058 714 aa7.46□□□□□ -1.22
CDH13-211ENST00000568770 PCBP4P57723 403 aaKnown RBP7.46□□□□□ -1.22
CDH13-211ENST00000568770 CCINQ13939 588 aa7.46□□□□□ -1.22
CDH13-211ENST00000568770 CNGB1Q14028 1251 aaPredicted RBP7.46□□□□□ -1.22
CDH13-211ENST00000568770 DLK2Q6UY11 383 aa7.46□□□□□ -1.22
CDH13-211ENST00000568770 CDC37L1Q7L3B6 337 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms