RNA–Protein interactions for RNA: ENST00000568750.1

TNRC6A-213, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 609 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-213ENST00000568750 USP17L19D6RCP7 530 aa12.44□□□□□ -0.42
TNRC6A-213ENST00000568750 USP17L20D6RJB6 530 aa12.44□□□□□ -0.42
TNRC6A-213ENST00000568750 ERVK-9P63128 1117 aa12.44□□□□□ -0.42
TNRC6A-213ENST00000568750 ERVK-24P63145 666 aa12.44□□□□□ -0.42
TNRC6A-213ENST00000568750 USP17L24Q0WX57 530 aa12.44□□□□□ -0.42
TNRC6A-213ENST00000568750 TSHZ3Q63HK5 1081 aa12.44□□□□□ -0.42
TNRC6A-213ENST00000568750 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
TNRC6A-213ENST00000568750 NUDT12Q9BQG2 462 aa12.44□□□□□ -0.42
TNRC6A-213ENST00000568750 GJD2Q9UKL4 321 aa12.44□□□□□ -0.42
TNRC6A-213ENST00000568750 HMGCRP04035 888 aa12.43□□□□□ -0.42
TNRC6A-213ENST00000568750 VCAM1P19320 739 aa12.43□□□□□ -0.42
TNRC6A-213ENST00000568750 GUCY1A2P33402 732 aa12.43□□□□□ -0.42
TNRC6A-213ENST00000568750 ATP2B2Q01814 1243 aa12.43□□□□□ -0.42
TNRC6A-213ENST00000568750 HABP4Q5JVS0 413 aaKnown RBP12.43□□□□□ -0.42
TNRC6A-213ENST00000568750 AMOTL1Q8IY63 956 aa12.43□□□□□ -0.42
TNRC6A-213ENST00000568750 STK11IPQ8N1F8 1099 aa12.43□□□□□ -0.42
TNRC6A-213ENST00000568750 DDRGK1Q96HY6 314 aa12.43□□□□□ -0.42
TNRC6A-213ENST00000568750 HTATIP2Q9BUP3 242 aa12.43□□□□□ -0.42
TNRC6A-213ENST00000568750 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.43□□□□□ -0.42
TNRC6A-213ENST00000568750 PORCNQ9H237 461 aa12.43□□□□□ -0.42
TNRC6A-213ENST00000568750 RPAP3Q9H6T3 665 aaPredicted RBP12.43□□□□□ -0.42
TNRC6A-213ENST00000568750 ECHDC1Q9NTX5 307 aa12.43□□□□□ -0.42
TNRC6A-213ENST00000568750 SLC4A4Q9Y6R1 1079 aa12.43□□□□□ -0.42
TNRC6A-213ENST00000568750 PHIPQ8WWQ0 1821 aa12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 SMIM22K7EJ46 135 aa12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 RAD21O60216 631 aa12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 AKR1B1P15121 316 aa12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 MAPK4P31152 587 aa12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 GABPAQ06546 454 aa12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 ZSCAN25Q6NSZ9 544 aa12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 CATSPERGQ6ZRH7 1159 aa12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 GPR142Q7Z601 462 aa12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 PLEKHH3Q7Z736 793 aa12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 CLEC10AQ8IUN9 316 aa12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 GTF3C2Q8WUA4 911 aaPredicted RBP12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 TRIB2Q92519 343 aa12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 GPATCH3Q96I76 525 aa12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 C12orf42Q96LP6 360 aa12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 YTHDC1Q96MU7 727 aaKnown RBP12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 TANGO6Q9C0B7 1094 aa12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 KIAA1683Q9H0B3 1180 aa12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 HMX1Q9NP08 348 aaPredicted RBP12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 COLQQ9Y215 455 aaPredicted RBP12.42□□□□□ -0.42
TNRC6A-213ENST00000568750 SIPA1L1O43166 1804 aa12.41□□□□□ -0.42
TNRC6A-213ENST00000568750 A0A1W2PRG0 241 aa12.41□□□□□ -0.42
TNRC6A-213ENST00000568750 USP17L12C9JPN9 530 aa12.41□□□□□ -0.42
TNRC6A-213ENST00000568750 USP17L21D6R901 530 aa12.41□□□□□ -0.42
TNRC6A-213ENST00000568750 CNMDO75829 334 aa12.41□□□□□ -0.42
TNRC6A-213ENST00000568750 PRKAR2AP13861 404 aaKnown RBP12.41□□□□□ -0.42
TNRC6A-213ENST00000568750 ZKSCAN1P17029 563 aaPredicted RBP12.41□□□□□ -0.42
TNRC6A-213ENST00000568750 CCNA1P78396 465 aa12.41□□□□□ -0.42
TNRC6A-213ENST00000568750 UBE3CQ15386 1083 aa12.41□□□□□ -0.42
TNRC6A-213ENST00000568750 POTEEQ6S8J3 1075 aa12.41□□□□□ -0.42
TNRC6A-213ENST00000568750 CHRDL2Q6WN34 429 aa12.41□□□□□ -0.42
TNRC6A-213ENST00000568750 SOCS4Q8WXH5 440 aa12.41□□□□□ -0.42
TNRC6A-213ENST00000568750 PUS7LQ9H0K6 701 aaKnown RBP12.41□□□□□ -0.42
TNRC6A-213ENST00000568750 ATP8A2Q9NTI2 1148 aa12.41□□□□□ -0.42
TNRC6A-213ENST00000568750 SWAP70Q9UH65 585 aa12.41□□□□□ -0.42
TNRC6A-213ENST00000568750 RABGAP1Q9Y3P9 1069 aa12.41□□□□□ -0.42
TNRC6A-213ENST00000568750 RPTORQ8N122 1335 aa12.4□□□□□ -0.42
TNRC6A-213ENST00000568750 MYO5AQ9Y4I1 1855 aaKnown RBP12.4□□□□□ -0.42
TNRC6A-213ENST00000568750 RGS2P41220 211 aa12.4□□□□□ -0.42
TNRC6A-213ENST00000568750 ICA1Q05084 483 aa12.4□□□□□ -0.42
TNRC6A-213ENST00000568750 CCL14Q16627 93 aa12.4□□□□□ -0.42
TNRC6A-213ENST00000568750 TMEM179Q6ZVK1 233 aa12.4□□□□□ -0.42
TNRC6A-213ENST00000568750 SPICE1Q8N0Z3 855 aa12.4□□□□□ -0.42
TNRC6A-213ENST00000568750 DIS3LQ8TF46 1054 aaKnown RBP12.4□□□□□ -0.42
TNRC6A-213ENST00000568750 PAWRQ96IZ0 340 aaKnown RBP12.4□□□□□ -0.42
TNRC6A-213ENST00000568750 DCTPP1Q9H773 170 aa12.4□□□□□ -0.42
TNRC6A-213ENST00000568750 PAK6Q9NQU5 681 aaPredicted RBP12.4□□□□□ -0.42
TNRC6A-213ENST00000568750 CENPFP49454 3210 aa12.4□□□□□ -0.42
TNRC6A-213ENST00000568750 GLRX3O76003 335 aaKnown RBP12.39□□□□□ -0.43
TNRC6A-213ENST00000568750 CDK8P49336 464 aa12.39□□□□□ -0.43
TNRC6A-213ENST00000568750 C12orf60Q5U649 245 aa12.39□□□□□ -0.43
TNRC6A-213ENST00000568750 UBE2Q1Q7Z7E8 422 aa12.39□□□□□ -0.43
TNRC6A-213ENST00000568750 ARHGEF10LQ9HCE6 1279 aa12.39□□□□□ -0.43
TNRC6A-213ENST00000568750 BTBD7Q9P203 1132 aa12.39□□□□□ -0.43
TNRC6A-213ENST00000568750 NR2E3Q9Y5X4 410 aa12.39□□□□□ -0.43
TNRC6A-213ENST00000568750 IVNS1ABPQ9Y6Y0 642 aa12.39□□□□□ -0.43
TNRC6A-213ENST00000568750 ATAD5Q96QE3 1844 aa12.39□□□□□ -0.43
TNRC6A-213ENST00000568750 PTPRFP10586 1907 aa12.39□□□□□ -0.43
TNRC6A-213ENST00000568750 LOC285556D6RIA3 1793 aa12.38□□□□□ -0.43
TNRC6A-213ENST00000568750 SPDYE16A6NNV3 312 aaPredicted RBP12.38□□□□□ -0.43
TNRC6A-213ENST00000568750 MINDY4BA8MYZ0 360 aa12.38□□□□□ -0.43
TNRC6A-213ENST00000568750 EVI5O60447 810 aa12.38□□□□□ -0.43
TNRC6A-213ENST00000568750 APPP05067 770 aa12.38□□□□□ -0.43
TNRC6A-213ENST00000568750 MAP2K5Q13163 448 aa12.38□□□□□ -0.43
TNRC6A-213ENST00000568750 PLS1Q14651 629 aa12.38□□□□□ -0.43
TNRC6A-213ENST00000568750 COG2Q14746 738 aa12.38□□□□□ -0.43
TNRC6A-213ENST00000568750 KIAA1755Q5JYT7 1200 aa12.38□□□□□ -0.43
TNRC6A-213ENST00000568750 CTR9Q6PD62 1173 aa12.38□□□□□ -0.43
TNRC6A-213ENST00000568750 NECAB2Q7Z6G3 386 aa12.38□□□□□ -0.43
TNRC6A-213ENST00000568750 APBA2Q99767 749 aa12.38□□□□□ -0.43
TNRC6A-213ENST00000568750 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
TNRC6A-213ENST00000568750 ZBTB47Q9UFB7 747 aaPredicted RBP12.38□□□□□ -0.43
TNRC6A-213ENST00000568750 PCDHB15Q9Y5E8 787 aa12.38□□□□□ -0.43
TNRC6A-213ENST00000568750 RBBP6Q7Z6E9 1792 aaKnown RBP12.38□□□□□ -0.43
TNRC6A-213ENST00000568750 RNF113AO15541 343 aaKnown RBP12.37□□□□□ -0.43
TNRC6A-213ENST00000568750 FLOT1O75955 427 aa12.37□□□□□ -0.43
TNRC6A-213ENST00000568750 XRCC5P13010 732 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms