RNA–Protein interactions for RNA: ENST00000568369.5

FANCA-230, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FANCA, Length 4,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-230ENST00000568369 CLIC4Q9Y696 253 aa11.83□□□□□ -0.52
FANCA-230ENST00000568369 PLA2R1Q13018 1463 aa11.83□□□□□ -0.52
FANCA-230ENST00000568369 NEO1Q92859 1461 aa11.83□□□□□ -0.52
FANCA-230ENST00000568369 SPOPO43791 374 aa11.83□□□□□ -0.52
FANCA-230ENST00000568369 ZSCAN26Q16670 478 aa11.83□□□□□ -0.52
FANCA-230ENST00000568369 SPATA1Q5VX52 437 aa11.83□□□□□ -0.52
FANCA-230ENST00000568369 DYMQ7RTS9 669 aa11.83□□□□□ -0.52
FANCA-230ENST00000568369 TSNARE1Q96NA8 513 aa11.83□□□□□ -0.52
FANCA-230ENST00000568369 PSMB7Q99436 277 aa11.83□□□□□ -0.52
FANCA-230ENST00000568369 ABCA8O94911 1581 aa11.83□□□□□ -0.52
FANCA-230ENST00000568369 KCNJ18B7U540 433 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 FLOT1O75955 427 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 DNM2P50570 870 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 TFAP4Q01664 338 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 KCNJ12Q14500 433 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 SETDB1Q15047 1291 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 LRRC24Q50LG9 513 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 CDCA7Q9BWT1 371 aaPredicted RBP11.82□□□□□ -0.52
FANCA-230ENST00000568369 NKIRAS1Q9NYS0 192 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 UTP11Q9Y3A2 253 aaKnown RBP11.82□□□□□ -0.52
FANCA-230ENST00000568369 CALUO43852 315 aaPredicted RBP11.82□□□□□ -0.52
FANCA-230ENST00000568369 CEP104O60308 925 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 ATP5DP30049 168 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 CTSWP56202 376 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 PLS1Q14651 629 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 TTLL7Q6ZT98 887 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 CROCCP2Q86T23 111 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 TRIM58Q8NG06 486 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 PPM1EQ8WY54 764 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 MPHOSPH6Q99547 160 aaKnown RBP11.82□□□□□ -0.52
FANCA-230ENST00000568369 H7C1D1 291 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 ADCY7P51828 1080 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 MXRA7P84157 204 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 UBE3CQ15386 1083 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 GBP6Q6ZN66 633 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 ZNF589Q86UQ0 364 aaPredicted RBP11.82□□□□□ -0.52
FANCA-230ENST00000568369 REXO1Q8N1G1 1221 aaKnown RBP11.82□□□□□ -0.52
FANCA-230ENST00000568369 SREK1Q8WXA9 508 aaKnown RBP11.82□□□□□ -0.52
FANCA-230ENST00000568369 CLIC6Q96NY7 704 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 FAM207AQ9NSI2 230 aaPredicted RBP11.82□□□□□ -0.52
FANCA-230ENST00000568369 TLR7Q9NYK1 1049 aaKnown RBP11.82□□□□□ -0.52
FANCA-230ENST00000568369 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.82□□□□□ -0.52
FANCA-230ENST00000568369 CEP83Q9Y592 693 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 USP17L12C9JPN9 530 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 USP17L21D6R901 530 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 IKBKBO14920 756 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 VIMP08670 466 aaKnown RBP11.82□□□□□ -0.52
FANCA-230ENST00000568369 RPS6KA1Q15418 735 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 CALCRLQ16602 461 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 EYA3Q99504 573 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 SWAP70Q9UH65 585 aa11.82□□□□□ -0.52
FANCA-230ENST00000568369 PCCAP05165 728 aaPredicted RBP11.81□□□□□ -0.52
FANCA-230ENST00000568369 LTKP29376 864 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 MORC3Q14149 939 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 PROSER3Q2NL68 480 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 C2CD5Q86YS7 1000 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 SMC6Q96SB8 1091 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 CCDC87Q9NVE4 849 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 TNKSO95271 1327 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 PPP6R2O75170 966 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 MAP3K9P80192 1104 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 SFMBT2Q5VUG0 894 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 TYW1BQ6NUM6 668 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 RRAGAQ7L523 313 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 ZBTB38Q8NAP3 1195 aaPredicted RBP11.81□□□□□ -0.52
FANCA-230ENST00000568369 CARMIL3Q8ND23 1372 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 UGGT1Q9NYU2 1555 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 ARHGAP25P42331 645 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 DPCR1Q3MIW9 517 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 TMEM87AQ8NBN3 555 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 RABGGTAQ92696 567 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 ARPP21Q9UBL0 812 aaPredicted RBP11.81□□□□□ -0.52
FANCA-230ENST00000568369 STK24Q9Y6E0 443 aa11.81□□□□□ -0.52
FANCA-230ENST00000568369 RIMBP2O15034 1052 aa11.8□□□□□ -0.52
FANCA-230ENST00000568369 GNPATO15228 680 aa11.8□□□□□ -0.52
FANCA-230ENST00000568369 UFL1O94874 794 aa11.8□□□□□ -0.52
FANCA-230ENST00000568369 ATP2A2P16615 1042 aaKnown RBP11.8□□□□□ -0.52
FANCA-230ENST00000568369 KLHL7Q8IXQ5 586 aa11.8□□□□□ -0.52
FANCA-230ENST00000568369 UBL4BQ8N7F7 174 aa11.8□□□□□ -0.52
FANCA-230ENST00000568369 CNBD1Q8NA66 436 aa11.8□□□□□ -0.52
FANCA-230ENST00000568369 CSRNP2Q9H175 543 aa11.8□□□□□ -0.52
FANCA-230ENST00000568369 MED23Q9ULK4 1368 aa11.8□□□□□ -0.52
FANCA-230ENST00000568369 GTPBP6O43824 516 aaPredicted RBP11.8□□□□□ -0.52
FANCA-230ENST00000568369 C11orf57Q6ZUT1 292 aaPredicted RBP11.8□□□□□ -0.52
FANCA-230ENST00000568369 BLIDQ8IZY5 108 aa11.8□□□□□ -0.52
FANCA-230ENST00000568369 CMTR1Q8N1G2 835 aaKnown RBP11.8□□□□□ -0.52
FANCA-230ENST00000568369 KIFAP3Q92845 792 aa11.8□□□□□ -0.52
FANCA-230ENST00000568369 CABS1Q96KC9 395 aa11.8□□□□□ -0.52
FANCA-230ENST00000568369 ZSCAN10Q96SZ4 725 aaPredicted RBP11.8□□□□□ -0.52
FANCA-230ENST00000568369 NLRC4Q9NPP4 1024 aa11.8□□□□□ -0.52
FANCA-230ENST00000568369 CDK12Q9NYV4 1490 aaPredicted RBP11.8□□□□□ -0.52
FANCA-230ENST00000568369 CPSF1Q10570 1443 aaKnown RBP11.8□□□□□ -0.52
FANCA-230ENST00000568369 TARBP1Q13395 1621 aaKnown RBP11.8□□□□□ -0.52
FANCA-230ENST00000568369 ERCC5P28715 1186 aaPredicted RBP11.8□□□□□ -0.52
FANCA-230ENST00000568369 ALDH3A1P30838 453 aa11.8□□□□□ -0.52
FANCA-230ENST00000568369 EIF6P56537 245 aaKnown RBP11.8□□□□□ -0.52
FANCA-230ENST00000568369 LACTBP83111 547 aaPredicted RBP11.8□□□□□ -0.52
FANCA-230ENST00000568369 NECTIN1Q15223 517 aa11.8□□□□□ -0.52
FANCA-230ENST00000568369 PPP1R13BQ96KQ4 1090 aa11.8□□□□□ -0.52
FANCA-230ENST00000568369 CEP63Q96MT8 703 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms