RNA–Protein interactions for RNA: ENST00000567934.5

CDH11-213, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 1,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-213ENST00000567934 SDSP20132 328 aa18.71■□□□□ 0.59
CDH11-213ENST00000567934 PKN2Q16513 984 aaKnown RBP18.71■□□□□ 0.59
CDH11-213ENST00000567934 IFFO2Q5TF58 517 aa18.71■□□□□ 0.59
CDH11-213ENST00000567934 TMEM179Q6ZVK1 233 aa18.71■□□□□ 0.59
CDH11-213ENST00000567934 ABHD8Q96I13 439 aa18.71■□□□□ 0.59
CDH11-213ENST00000567934 EFCC1Q9HA90 598 aa18.71■□□□□ 0.59
CDH11-213ENST00000567934 ZNF287Q9HBT7 754 aa18.71■□□□□ 0.59
CDH11-213ENST00000567934 A0A0D9SFI3 127 aa18.7■□□□□ 0.58
CDH11-213ENST00000567934 HIP1O00291 1037 aa18.7■□□□□ 0.58
CDH11-213ENST00000567934 MGAMO43451 1857 aa18.7■□□□□ 0.58
CDH11-213ENST00000567934 CENPBP07199 599 aaPredicted RBP18.7■□□□□ 0.58
CDH11-213ENST00000567934 AKR1B1P15121 316 aa18.7■□□□□ 0.58
CDH11-213ENST00000567934 USP14P54578 494 aa18.7■□□□□ 0.58
CDH11-213ENST00000567934 IRX3P78415 501 aaPredicted RBP18.7■□□□□ 0.58
CDH11-213ENST00000567934 C17orf99Q6UX52 265 aa18.7■□□□□ 0.58
CDH11-213ENST00000567934 GUCY1A2P33402 732 aa18.69■□□□□ 0.58
CDH11-213ENST00000567934 MFAP1P55081 439 aaKnown RBP18.69■□□□□ 0.58
CDH11-213ENST00000567934 ATP2B2Q01814 1243 aa18.69■□□□□ 0.58
CDH11-213ENST00000567934 TTC22Q5TAA0 569 aa18.69■□□□□ 0.58
CDH11-213ENST00000567934 ZNF444Q8N0Y2 327 aaPredicted RBP18.69■□□□□ 0.58
CDH11-213ENST00000567934 ACER1Q8TDN7 264 aa18.69■□□□□ 0.58
CDH11-213ENST00000567934 ARHGEF10LQ9HCE6 1279 aa18.69■□□□□ 0.58
CDH11-213ENST00000567934 CCDC85CA6NKD9 419 aa18.68■□□□□ 0.58
CDH11-213ENST00000567934 CWC27Q6UX04 472 aaKnown RBP18.68■□□□□ 0.58
CDH11-213ENST00000567934 CENPQQ7L2Z9 268 aaPredicted RBP18.68■□□□□ 0.58
CDH11-213ENST00000567934 OTOP1Q7RTM1 612 aa18.68■□□□□ 0.58
CDH11-213ENST00000567934 EMILIN3Q9NT22 766 aa18.68■□□□□ 0.58
CDH11-213ENST00000567934 ZSWIM8A7E2V4 1837 aa18.67■□□□□ 0.58
CDH11-213ENST00000567934 LACTBP83111 547 aaPredicted RBP18.67■□□□□ 0.58
CDH11-213ENST00000567934 ICA1Q05084 483 aa18.67■□□□□ 0.58
CDH11-213ENST00000567934 PDE4BQ07343 736 aa18.67■□□□□ 0.58
CDH11-213ENST00000567934 PPARAQ07869 468 aa18.67■□□□□ 0.58
CDH11-213ENST00000567934 VPS53Q5VIR6 699 aa18.67■□□□□ 0.58
CDH11-213ENST00000567934 FBXO46Q6PJ61 603 aaPredicted RBP18.67■□□□□ 0.58
CDH11-213ENST00000567934 CCDC136Q96JN2 1154 aa18.67■□□□□ 0.58
CDH11-213ENST00000567934 KIAA1683Q9H0B3 1180 aa18.67■□□□□ 0.58
CDH11-213ENST00000567934 ASCC2Q9H1I8 757 aaPredicted RBP18.67■□□□□ 0.58
CDH11-213ENST00000567934 CCDC171Q6TFL3 1326 aa18.67■□□□□ 0.58
CDH11-213ENST00000567934 MYH4Q9Y623 1939 aa18.66■□□□□ 0.58
CDH11-213ENST00000567934 PRDM1O75626 825 aa18.66■□□□□ 0.58
CDH11-213ENST00000567934 FMNL1O95466 1100 aaPredicted RBP18.66■□□□□ 0.58
CDH11-213ENST00000567934 ANKRD13CQ8N6S4 541 aa18.66■□□□□ 0.58
CDH11-213ENST00000567934 SH2D4AQ9H788 454 aa18.66■□□□□ 0.58
CDH11-213ENST00000567934 ADGRA2Q96PE1 1338 aa18.66■□□□□ 0.58
CDH11-213ENST00000567934 RAD21O60216 631 aa18.65■□□□□ 0.58
CDH11-213ENST00000567934 HSPD1P10809 573 aaKnown RBP18.65■□□□□ 0.58
CDH11-213ENST00000567934 RASA1P20936 1047 aa18.65■□□□□ 0.58
CDH11-213ENST00000567934 HOXA7P31268 230 aaPredicted RBP18.65■□□□□ 0.58
CDH11-213ENST00000567934 PSMC4P43686 418 aa18.65■□□□□ 0.58
CDH11-213ENST00000567934 GCLCP48506 637 aaPredicted RBP18.65■□□□□ 0.58
CDH11-213ENST00000567934 ZNF589Q86UQ0 364 aaPredicted RBP18.65■□□□□ 0.58
CDH11-213ENST00000567934 CLEC10AQ8IUN9 316 aa18.65■□□□□ 0.58
CDH11-213ENST00000567934 ARHGAP39Q9C0H5 1083 aa18.65■□□□□ 0.58
CDH11-213ENST00000567934 KANSL2Q9H9L4 492 aa18.65■□□□□ 0.58
CDH11-213ENST00000567934 ROBO3Q96MS0 1386 aa18.65■□□□□ 0.58
CDH11-213ENST00000567934 USP17L15C9J2P7 530 aa18.64■□□□□ 0.57
CDH11-213ENST00000567934 USP17L13C9JLJ4 530 aa18.64■□□□□ 0.57
CDH11-213ENST00000567934 USP17L11C9JVI0 530 aa18.64■□□□□ 0.57
CDH11-213ENST00000567934 USP17L18D6R9N7 530 aa18.64■□□□□ 0.57
CDH11-213ENST00000567934 USP17L22D6RA61 530 aa18.64■□□□□ 0.57
CDH11-213ENST00000567934 USP17L17D6RBQ6 530 aa18.64■□□□□ 0.57
CDH11-213ENST00000567934 USP17L19D6RCP7 530 aa18.64■□□□□ 0.57
CDH11-213ENST00000567934 USP17L20D6RJB6 530 aa18.64■□□□□ 0.57
CDH11-213ENST00000567934 BCRP11274 1271 aa18.64■□□□□ 0.57
CDH11-213ENST00000567934 GSPT1P15170 499 aaKnown RBP18.64■□□□□ 0.57
CDH11-213ENST00000567934 HOXD10P28358 340 aa18.64■□□□□ 0.57
CDH11-213ENST00000567934 CTDSPL2Q05D32 466 aa18.64■□□□□ 0.57
CDH11-213ENST00000567934 USP17L24Q0WX57 530 aa18.64■□□□□ 0.57
CDH11-213ENST00000567934 C12orf42Q96LP6 360 aa18.64■□□□□ 0.57
CDH11-213ENST00000567934 P2RX7Q99572 595 aaKnown RBP18.64■□□□□ 0.57
CDH11-213ENST00000567934 DOCK3Q8IZD9 2030 aa18.63■□□□□ 0.57
CDH11-213ENST00000567934 A0A1W2PRG0 241 aa18.63■□□□□ 0.57
CDH11-213ENST00000567934 FGAP02671 866 aa18.63■□□□□ 0.57
CDH11-213ENST00000567934 TSPY3P0CV98 308 aa18.63■□□□□ 0.57
CDH11-213ENST00000567934 TSPY8P0CW00 308 aa18.63■□□□□ 0.57
CDH11-213ENST00000567934 EEF2P13639 858 aaKnown RBP18.63■□□□□ 0.57
CDH11-213ENST00000567934 VCAM1P19320 739 aa18.63■□□□□ 0.57
CDH11-213ENST00000567934 FCGRTP55899 365 aa18.63■□□□□ 0.57
CDH11-213ENST00000567934 ALX1Q15699 326 aa18.63■□□□□ 0.57
CDH11-213ENST00000567934 TOMM22Q9NS69 142 aa18.63■□□□□ 0.57
CDH11-213ENST00000567934 HPS5Q9UPZ3 1129 aa18.63■□□□□ 0.57
CDH11-213ENST00000567934 PTPN22Q9Y2R2 807 aa18.63■□□□□ 0.57
CDH11-213ENST00000567934 GNRH1P01148 92 aa18.62■□□□□ 0.57
CDH11-213ENST00000567934 HERVK_113P62684 666 aa18.62■□□□□ 0.57
CDH11-213ENST00000567934 CAP1Q01518 475 aa18.62■□□□□ 0.57
CDH11-213ENST00000567934 RUFY2Q8WXA3 655 aa18.62■□□□□ 0.57
CDH11-213ENST00000567934 TANGO6Q9C0B7 1094 aa18.62■□□□□ 0.57
CDH11-213ENST00000567934 RPAP3Q9H6T3 665 aaPredicted RBP18.62■□□□□ 0.57
CDH11-213ENST00000567934 TMX2Q9Y320 296 aa18.62■□□□□ 0.57
CDH11-213ENST00000567934 GREB1LQ9C091 1923 aaPredicted RBP18.61■□□□□ 0.57
CDH11-213ENST00000567934 FOXP2O15409 715 aa18.61■□□□□ 0.57
CDH11-213ENST00000567934 TFAP4Q01664 338 aa18.61■□□□□ 0.57
CDH11-213ENST00000567934 FAM110CQ1W6H9 321 aa18.61■□□□□ 0.57
CDH11-213ENST00000567934 FAM47AQ5JRC9 791 aa18.61■□□□□ 0.57
CDH11-213ENST00000567934 CATSPERGQ6ZRH7 1159 aa18.61■□□□□ 0.57
CDH11-213ENST00000567934 CCAR1Q8IX12 1150 aaKnown RBP18.61■□□□□ 0.57
CDH11-213ENST00000567934 SPICE1Q8N0Z3 855 aa18.61■□□□□ 0.57
CDH11-213ENST00000567934 GTF3C2Q8WUA4 911 aaPredicted RBP18.61■□□□□ 0.57
CDH11-213ENST00000567934 PAGR1Q9BTK6 254 aa18.61■□□□□ 0.57
CDH11-213ENST00000567934 GOPCQ9HD26 462 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms