RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 RABGAP1Q9Y3P9 1069 aa17.14■□□□□ 0.33
SMG1-213ENST00000567737 HOXC6P09630 235 aa17.13■□□□□ 0.33
SMG1-213ENST00000567737 ITGB8P26012 769 aa17.13■□□□□ 0.33
SMG1-213ENST00000567737 ADCYAP1R1P41586 468 aa17.13■□□□□ 0.33
SMG1-213ENST00000567737 PHKA1P46020 1223 aa17.13■□□□□ 0.33
SMG1-213ENST00000567737 RHBDL3P58872 404 aa17.13■□□□□ 0.33
SMG1-213ENST00000567737 GSE1Q14687 1217 aa17.13■□□□□ 0.33
SMG1-213ENST00000567737 ANO1Q5XXA6 986 aa17.13■□□□□ 0.33
SMG1-213ENST00000567737 SPTY2D1Q68D10 685 aaPredicted RBP17.13■□□□□ 0.33
SMG1-213ENST00000567737 NPLOC4Q8TAT6 608 aa17.13■□□□□ 0.33
SMG1-213ENST00000567737 FERMT2Q96AC1 680 aa17.13■□□□□ 0.33
SMG1-213ENST00000567737 LRFN3Q9BTN0 628 aa17.13■□□□□ 0.33
SMG1-213ENST00000567737 TSPYL2Q9H2G4 693 aaPredicted RBP17.13■□□□□ 0.33
SMG1-213ENST00000567737 GPR75-ASB3A0A0A6YYF3 556 aa17.12■□□□□ 0.33
SMG1-213ENST00000567737 EXOSC9Q06265 439 aaKnown RBP17.12■□□□□ 0.33
SMG1-213ENST00000567737 CCDC129Q6ZRS4 1044 aa17.12■□□□□ 0.33
SMG1-213ENST00000567737 NECAB3Q96P71 396 aaPredicted RBP17.12■□□□□ 0.33
SMG1-213ENST00000567737 KIAA0355O15063 1070 aa17.11■□□□□ 0.33
SMG1-213ENST00000567737 MAP4K4O95819 1239 aaPredicted RBP17.11■□□□□ 0.33
SMG1-213ENST00000567737 IGFBP4P22692 258 aa17.11■□□□□ 0.33
SMG1-213ENST00000567737 GRB14Q14449 540 aa17.11■□□□□ 0.33
SMG1-213ENST00000567737 RASEFQ8IZ41 740 aa17.11■□□□□ 0.33
SMG1-213ENST00000567737 CIZ1Q9ULV3 898 aaPredicted RBP17.11■□□□□ 0.33
SMG1-213ENST00000567737 SEPT4O43236 478 aa17.1■□□□□ 0.33
SMG1-213ENST00000567737 LRRC41Q15345 812 aa17.1■□□□□ 0.33
SMG1-213ENST00000567737 USP17L2Q6R6M4 530 aa17.1■□□□□ 0.33
SMG1-213ENST00000567737 FAM212AQ96EL1 285 aa17.1■□□□□ 0.33
SMG1-213ENST00000567737 CEP126Q9P2H0 1117 aa17.1■□□□□ 0.33
SMG1-213ENST00000567737 CNMDO75829 334 aa17.09■□□□□ 0.33
SMG1-213ENST00000567737 MECOMQ03112 1051 aa17.09■□□□□ 0.33
SMG1-213ENST00000567737 AAK1Q2M2I8 961 aa17.09■□□□□ 0.33
SMG1-213ENST00000567737 TMEM31Q5JXX7 168 aa17.09■□□□□ 0.33
SMG1-213ENST00000567737 ERICH6Q7L0X2 663 aa17.09■□□□□ 0.33
SMG1-213ENST00000567737 ATG9AQ7Z3C6 839 aa17.09■□□□□ 0.33
SMG1-213ENST00000567737 DPP9Q86TI2 863 aa17.09■□□□□ 0.33
SMG1-213ENST00000567737 PBX4Q9BYU1 374 aa17.09■□□□□ 0.33
SMG1-213ENST00000567737 TMEM39AQ9NV64 488 aa17.09■□□□□ 0.33
SMG1-213ENST00000567737 CXXC1Q9P0U4 656 aaPredicted RBP17.09■□□□□ 0.33
SMG1-213ENST00000567737 PI4KBQ9UBF8 816 aa17.09■□□□□ 0.33
SMG1-213ENST00000567737 PDS5AQ29RF7 1337 aaKnown RBP17.08■□□□□ 0.32
SMG1-213ENST00000567737 PQBP1O60828 265 aaKnown RBP17.08■□□□□ 0.32
SMG1-213ENST00000567737 LDHCP07864 332 aa17.08■□□□□ 0.32
SMG1-213ENST00000567737 BMP1P13497 986 aa17.08■□□□□ 0.32
SMG1-213ENST00000567737 RFX5P48382 616 aaPredicted RBP17.08■□□□□ 0.32
SMG1-213ENST00000567737 RASGRF1Q13972 1273 aa17.08■□□□□ 0.32
SMG1-213ENST00000567737 ADGRE1Q14246 886 aa17.08■□□□□ 0.32
SMG1-213ENST00000567737 OLFML2BQ68BL8 750 aa17.08■□□□□ 0.32
SMG1-213ENST00000567737 CCDC102BQ68D86 513 aa17.08■□□□□ 0.32
SMG1-213ENST00000567737 ALYREFQ86V81 257 aaKnown RBP17.08■□□□□ 0.32
SMG1-213ENST00000567737 TRIM34Q9BYJ4 488 aa17.08■□□□□ 0.32
SMG1-213ENST00000567737 GINM1Q9NU53 330 aa17.08■□□□□ 0.32
SMG1-213ENST00000567737 USP17L15C9J2P7 530 aa17.07■□□□□ 0.32
SMG1-213ENST00000567737 USP17L13C9JLJ4 530 aa17.07■□□□□ 0.32
SMG1-213ENST00000567737 USP17L11C9JVI0 530 aa17.07■□□□□ 0.32
SMG1-213ENST00000567737 USP17L18D6R9N7 530 aa17.07■□□□□ 0.32
SMG1-213ENST00000567737 USP17L22D6RA61 530 aa17.07■□□□□ 0.32
SMG1-213ENST00000567737 USP17L17D6RBQ6 530 aa17.07■□□□□ 0.32
SMG1-213ENST00000567737 USP17L19D6RCP7 530 aa17.07■□□□□ 0.32
SMG1-213ENST00000567737 USP17L20D6RJB6 530 aa17.07■□□□□ 0.32
SMG1-213ENST00000567737 IGHA2P01877 340 aa17.07■□□□□ 0.32
SMG1-213ENST00000567737 PBX2P40425 430 aa17.07■□□□□ 0.32
SMG1-213ENST00000567737 GSTO1P78417 241 aa17.07■□□□□ 0.32
SMG1-213ENST00000567737 USP17L24Q0WX57 530 aa17.07■□□□□ 0.32
SMG1-213ENST00000567737 DDX10Q13206 875 aaKnown RBP17.07■□□□□ 0.32
SMG1-213ENST00000567737 CCDC174Q6PII3 467 aa17.07■□□□□ 0.32
SMG1-213ENST00000567737 DHX36Q9H2U1 1008 aaKnown RBP17.07■□□□□ 0.32
SMG1-213ENST00000567737 EPHX3Q9H6B9 360 aa17.07■□□□□ 0.32
SMG1-213ENST00000567737 EMILIN3Q9NT22 766 aa17.07■□□□□ 0.32
SMG1-213ENST00000567737 PHF24Q9UPV7 400 aa17.07■□□□□ 0.32
SMG1-213ENST00000567737 NCOR1O75376 2440 aa17.06■□□□□ 0.32
SMG1-213ENST00000567737 GDF11O95390 407 aa17.06■□□□□ 0.32
SMG1-213ENST00000567737 JAG1P78504 1218 aa17.06■□□□□ 0.32
SMG1-213ENST00000567737 FAM47AQ5JRC9 791 aa17.06■□□□□ 0.32
SMG1-213ENST00000567737 TEX11Q8IYF3 940 aa17.06■□□□□ 0.32
SMG1-213ENST00000567737 CRACR2BQ8N4Y2 399 aaPredicted RBP17.06■□□□□ 0.32
SMG1-213ENST00000567737 SLC44A5Q8NCS7 719 aa17.06■□□□□ 0.32
SMG1-213ENST00000567737 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMG1-213ENST00000567737 SIL1Q9H173 461 aa17.06■□□□□ 0.32
SMG1-213ENST00000567737 ZBTB21Q9ULJ3 1066 aa17.06■□□□□ 0.32
SMG1-213ENST00000567737 BDP1A6H8Y1 2624 aa17.06■□□□□ 0.32
SMG1-213ENST00000567737 GRXCR1A8MXD5 290 aa17.05■□□□□ 0.32
SMG1-213ENST00000567737 CIAO1O76071 339 aa17.05■□□□□ 0.32
SMG1-213ENST00000567737 SNX27Q96L92 541 aa17.05■□□□□ 0.32
SMG1-213ENST00000567737 FEZ1Q99689 392 aa17.05■□□□□ 0.32
SMG1-213ENST00000567737 MSRAQ9UJ68 235 aa17.05■□□□□ 0.32
SMG1-213ENST00000567737 ADORA2AP29274 412 aa17.04■□□□□ 0.32
SMG1-213ENST00000567737 ADORA1P30542 326 aa17.04■□□□□ 0.32
SMG1-213ENST00000567737 RAB30Q15771 203 aa17.04■□□□□ 0.32
SMG1-213ENST00000567737 ZYXQ15942 572 aaKnown RBP17.04■□□□□ 0.32
SMG1-213ENST00000567737 C12orf42Q96LP6 360 aa17.04■□□□□ 0.32
SMG1-213ENST00000567737 SLC5A4Q9NY91 659 aa17.04■□□□□ 0.32
SMG1-213ENST00000567737 BTBD7Q9P203 1132 aa17.04■□□□□ 0.32
SMG1-213ENST00000567737 DCDC2CA8MYV0 355 aa17.03■□□□□ 0.32
SMG1-213ENST00000567737 STRNO43815 780 aa17.03■□□□□ 0.32
SMG1-213ENST00000567737 TFF2Q03403 129 aa17.03■□□□□ 0.32
SMG1-213ENST00000567737 PPIGQ13427 754 aaKnown RBP eCLIP17.03■□□□□ 0.323e-6■□□□□ 9.8
SMG1-213ENST00000567737 SHROOM1Q2M3G4 852 aaPredicted RBP17.03■□□□□ 0.32
SMG1-213ENST00000567737 PRAMEF19Q5SWL8 479 aa17.03■□□□□ 0.32
SMG1-213ENST00000567737 LBX2Q6XYB7 198 aa17.03■□□□□ 0.32
SMG1-213ENST00000567737 CATSPERGQ6ZRH7 1159 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms