RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 CTCFP49711 727 aaPredicted RBP20.47■□□□□ 0.87
COMMD4-220ENST00000567720 SH3D19Q5HYK7 790 aa20.47■□□□□ 0.87
COMMD4-220ENST00000567720 GADL1Q6ZQY3 521 aa20.47■□□□□ 0.87
COMMD4-220ENST00000567720 ANKRD23Q86SG2 305 aa20.47■□□□□ 0.87
COMMD4-220ENST00000567720 ACER1Q8TDN7 264 aa20.47■□□□□ 0.87
COMMD4-220ENST00000567720 ESYT1Q9BSJ8 1104 aa20.47■□□□□ 0.87
COMMD4-220ENST00000567720 R3HDMLQ9H3Y0 253 aa20.47■□□□□ 0.87
COMMD4-220ENST00000567720 MKNK2Q9HBH9 465 aa20.47■□□□□ 0.87
COMMD4-220ENST00000567720 CDC45O75419 566 aa20.46■□□□□ 0.87
COMMD4-220ENST00000567720 ALDH1A1P00352 501 aa20.46■□□□□ 0.87
COMMD4-220ENST00000567720 SLC3A2P08195 630 aaKnown RBP20.46■□□□□ 0.87
COMMD4-220ENST00000567720 BACE1P56817 501 aa20.46■□□□□ 0.87
COMMD4-220ENST00000567720 PTH1RQ03431 593 aa20.46■□□□□ 0.87
COMMD4-220ENST00000567720 ICA1Q05084 483 aa20.46■□□□□ 0.87
COMMD4-220ENST00000567720 PDE4BQ07343 736 aa20.46■□□□□ 0.87
COMMD4-220ENST00000567720 CRHR2Q13324 411 aa20.46■□□□□ 0.87
COMMD4-220ENST00000567720 TREML2Q5T2D2 321 aa20.46■□□□□ 0.87
COMMD4-220ENST00000567720 PROCA1Q8NCQ7 364 aaPredicted RBP20.46■□□□□ 0.87
COMMD4-220ENST00000567720 ZCCHC17Q9NP64 241 aaKnown RBP20.46■□□□□ 0.87
COMMD4-220ENST00000567720 INCENPQ9NQS7 918 aa20.46■□□□□ 0.87
COMMD4-220ENST00000567720 USP17L10C9JJH3 530 aa20.45■□□□□ 0.86
COMMD4-220ENST00000567720 TBC1D8O95759 1140 aa20.45■□□□□ 0.86
COMMD4-220ENST00000567720 LBX1P52954 281 aa20.45■□□□□ 0.86
COMMD4-220ENST00000567720 OTUD7BQ6GQQ9 843 aa20.45■□□□□ 0.86
COMMD4-220ENST00000567720 FASTKD5Q7L8L6 764 aaKnown RBP20.45■□□□□ 0.86
COMMD4-220ENST00000567720 FEZ1Q99689 392 aa20.45■□□□□ 0.86
COMMD4-220ENST00000567720 ZNF287Q9HBT7 754 aa20.45■□□□□ 0.86
COMMD4-220ENST00000567720 AGTPBP1Q9UPW5 1226 aa20.45■□□□□ 0.86
COMMD4-220ENST00000567720 NEDD4P46934 1319 aa20.45■□□□□ 0.86
COMMD4-220ENST00000567720 ADGRA2Q96PE1 1338 aa20.45■□□□□ 0.86
COMMD4-220ENST00000567720 COL11A1P12107 1806 aaPredicted RBP20.44■□□□□ 0.86
COMMD4-220ENST00000567720 IGKV6D-41A0A0C4DH26 115 aa20.44■□□□□ 0.86
COMMD4-220ENST00000567720 A0A1W2PRG0 241 aa20.44■□□□□ 0.86
COMMD4-220ENST00000567720 PDHXO00330 501 aa20.44■□□□□ 0.86
COMMD4-220ENST00000567720 FGRP09769 529 aa20.44■□□□□ 0.86
COMMD4-220ENST00000567720 TAF1CQ15572 869 aaPredicted RBP20.44■□□□□ 0.86
COMMD4-220ENST00000567720 ZYXQ15942 572 aaKnown RBP20.44■□□□□ 0.86
COMMD4-220ENST00000567720 KIAA1683Q9H0B3 1180 aa20.44■□□□□ 0.86
COMMD4-220ENST00000567720 ORC4O43929 436 aa20.43■□□□□ 0.86
COMMD4-220ENST00000567720 FAM47AQ5JRC9 791 aa20.43■□□□□ 0.86
COMMD4-220ENST00000567720 SIAH1Q8IUQ4 282 aa20.43■□□□□ 0.86
COMMD4-220ENST00000567720 NKX2-3Q8TAU0 364 aa20.43■□□□□ 0.86
COMMD4-220ENST00000567720 STAG1Q8WVM7 1258 aa20.43■□□□□ 0.86
COMMD4-220ENST00000567720 C12orf42Q96LP6 360 aa20.43■□□□□ 0.86
COMMD4-220ENST00000567720 EMILIN3Q9NT22 766 aa20.43■□□□□ 0.86
COMMD4-220ENST00000567720 C19orf81C9J6K1 198 aa20.42■□□□□ 0.86
COMMD4-220ENST00000567720 ZNF444Q8N0Y2 327 aaPredicted RBP20.42■□□□□ 0.86
COMMD4-220ENST00000567720 LSG1Q9H089 658 aaKnown RBP20.42■□□□□ 0.86
COMMD4-220ENST00000567720 ZNF213O14771 459 aa20.41■□□□□ 0.86
COMMD4-220ENST00000567720 EEF2P13639 858 aaKnown RBP20.41■□□□□ 0.86
COMMD4-220ENST00000567720 IMMTQ16891 758 aaKnown RBP20.41■□□□□ 0.86
COMMD4-220ENST00000567720 AKNAD1Q5T1N1 836 aa20.41■□□□□ 0.86
COMMD4-220ENST00000567720 USP17L2Q6R6M4 530 aa20.41■□□□□ 0.86
COMMD4-220ENST00000567720 NEDD1Q8NHV4 660 aa20.41■□□□□ 0.86
COMMD4-220ENST00000567720 CEP95Q96GE4 821 aa20.41■□□□□ 0.86
COMMD4-220ENST00000567720 KANSL2Q9H9L4 492 aa20.41■□□□□ 0.86
COMMD4-220ENST00000567720 ARHGEF10LQ9HCE6 1279 aa20.41■□□□□ 0.86
COMMD4-220ENST00000567720 TMOD4Q9NZQ9 345 aa20.41■□□□□ 0.86
COMMD4-220ENST00000567720 SLC45A1Q9Y2W3 748 aa20.41■□□□□ 0.86
COMMD4-220ENST00000567720 HTTP42858 3142 aa20.41■□□□□ 0.86
COMMD4-220ENST00000567720 TSPY3P0CV98 308 aa20.4■□□□□ 0.86
COMMD4-220ENST00000567720 TSPY8P0CW00 308 aa20.4■□□□□ 0.86
COMMD4-220ENST00000567720 CYP2C8P10632 490 aa20.4■□□□□ 0.86
COMMD4-220ENST00000567720 VCAM1P19320 739 aa20.4■□□□□ 0.86
COMMD4-220ENST00000567720 TFAP4Q01664 338 aa20.4■□□□□ 0.86
COMMD4-220ENST00000567720 RRP12Q5JTH9 1297 aaKnown RBP20.4■□□□□ 0.86
COMMD4-220ENST00000567720 KIAA1755Q5JYT7 1200 aa20.4■□□□□ 0.86
COMMD4-220ENST00000567720 PARK7Q99497 189 aaKnown RBP20.4■□□□□ 0.86
COMMD4-220ENST00000567720 TOMM22Q9NS69 142 aa20.4■□□□□ 0.86
COMMD4-220ENST00000567720 CTNNA3Q9UI47 895 aa20.4■□□□□ 0.86
COMMD4-220ENST00000567720 TMX2Q9Y320 296 aa20.4■□□□□ 0.86
COMMD4-220ENST00000567720 TAF6LQ9Y6J9 622 aa20.4■□□□□ 0.86
COMMD4-220ENST00000567720 U3KPZ7 1027 aaPredicted RBP20.4■□□□□ 0.86
COMMD4-220ENST00000567720 TSPY2A6NKD2 308 aa20.39■□□□□ 0.85
COMMD4-220ENST00000567720 GPR25O00155 361 aa20.39■□□□□ 0.85
COMMD4-220ENST00000567720 RANBP6O60518 1105 aaKnown RBP20.39■□□□□ 0.85
COMMD4-220ENST00000567720 CYP21A2P08686 494 aa20.39■□□□□ 0.85
COMMD4-220ENST00000567720 PCP11498 1178 aaKnown RBP20.39■□□□□ 0.85
COMMD4-220ENST00000567720 USP14P54578 494 aa20.39■□□□□ 0.85
COMMD4-220ENST00000567720 ATP2B2Q01814 1243 aa20.39■□□□□ 0.85
COMMD4-220ENST00000567720 NOM1Q5C9Z4 860 aaKnown RBP20.39■□□□□ 0.85
COMMD4-220ENST00000567720 CASC1Q6TDU7 716 aa20.39■□□□□ 0.85
COMMD4-220ENST00000567720 MAP4K1Q92918 833 aa20.39■□□□□ 0.85
COMMD4-220ENST00000567720 ZFYVE28Q9HCC9 887 aa20.39■□□□□ 0.85
COMMD4-220ENST00000567720 ANO2Q9NQ90 1003 aa20.39■□□□□ 0.85
COMMD4-220ENST00000567720 RBM8AQ9Y5S9 174 aaKnown RBP20.39■□□□□ 0.85
COMMD4-220ENST00000567720 NMT2O60551 498 aa20.38■□□□□ 0.85
COMMD4-220ENST00000567720 TLR2O60603 784 aa20.38■□□□□ 0.85
COMMD4-220ENST00000567720 MFSD6Q6ZSS7 791 aa20.38■□□□□ 0.85
COMMD4-220ENST00000567720 ZNF296Q8WUU4 475 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-220ENST00000567720 RNF41Q9H4P4 317 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-220ENST00000567720 SH2D4AQ9H788 454 aa20.38■□□□□ 0.85
COMMD4-220ENST00000567720 VCPKMTQ9H867 229 aa20.38■□□□□ 0.85
COMMD4-220ENST00000567720 PRDM10Q9NQV6 1147 aa20.38■□□□□ 0.85
COMMD4-220ENST00000567720 MTMR4Q9NYA4 1195 aa20.38■□□□□ 0.85
COMMD4-220ENST00000567720 NYAP2Q9P242 653 aa20.38■□□□□ 0.85
COMMD4-220ENST00000567720 ASCC2Q9H1I8 757 aaPredicted RBP20.37■□□□□ 0.85
COMMD4-220ENST00000567720 IL17RBQ9NRM6 502 aa20.37■□□□□ 0.85
COMMD4-220ENST00000567720 PNMA3Q9UL41 463 aa20.37■□□□□ 0.85
COMMD4-220ENST00000567720 HOXA7P31268 230 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms