RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 STRBPQ96SI9 672 aaKnown RBP8.32□□□□□ -1.08
SF3B3-209ENST00000567635 FEZ1Q99689 392 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 PUS7LQ9H0K6 701 aaKnown RBP8.32□□□□□ -1.08
SF3B3-209ENST00000567635 BIN2Q9UBW5 565 aaPredicted RBP8.32□□□□□ -1.08
SF3B3-209ENST00000567635 SWAP70Q9UH65 585 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 GABRQQ9UN88 632 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 SLC4A4Q9Y6R1 1079 aa8.32□□□□□ -1.08
SF3B3-209ENST00000567635 TNRC18O15417 2968 aaPredicted RBP8.32□□□□□ -1.08
SF3B3-209ENST00000567635 USP17L15C9J2P7 530 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 USP17L13C9JLJ4 530 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 USP17L11C9JVI0 530 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 USP17L18D6R9N7 530 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 USP17L22D6RA61 530 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 USP17L17D6RBQ6 530 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 USP17L19D6RCP7 530 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 USP17L20D6RJB6 530 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 MPHOSPH10O00566 681 aaKnown RBP8.31□□□□□ -1.08
SF3B3-209ENST00000567635 TNPO2O14787 897 aaKnown RBP8.31□□□□□ -1.08
SF3B3-209ENST00000567635 ADCY3O60266 1144 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 GLRX3O76003 335 aaKnown RBP8.31□□□□□ -1.08
SF3B3-209ENST00000567635 MYCP01106 439 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-209ENST00000567635 EN2P19622 333 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-209ENST00000567635 GUCY1A2P33402 732 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 FLT3LGP49771 235 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 USP14P54578 494 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 EVX2Q03828 476 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 PRKCZQ05513 592 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 USP17L24Q0WX57 530 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 HDAC1Q13547 482 aaPredicted RBP8.31□□□□□ -1.08
SF3B3-209ENST00000567635 SEPT2Q15019 361 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 ZYXQ15942 572 aaKnown RBP8.31□□□□□ -1.08
SF3B3-209ENST00000567635 C12orf60Q5U649 245 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 CTR9Q6PD62 1173 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 GPRC5AQ8NFJ5 357 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 ACER1Q8TDN7 264 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 GCC1Q96CN9 775 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 DYNLL2Q96FJ2 89 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 C12orf42Q96LP6 360 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 KIAA1683Q9H0B3 1180 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 MORF4L1Q9UBU8 362 aa8.31□□□□□ -1.08
SF3B3-209ENST00000567635 CYP2D7A0A087X1C5 515 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 GSG1L2A8MUP6 293 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 CENPBP07199 599 aaPredicted RBP8.3□□□□□ -1.08
SF3B3-209ENST00000567635 MX1P20591 662 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 CDK8P49336 464 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 HERVK_113P62684 666 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 UBXN2AP68543 259 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 IRF5Q13568 498 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 SBK1Q52WX2 424 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 GIMAP6Q6P9H5 292 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 CATSPERGQ6ZRH7 1159 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 TMEM179Q6ZVK1 233 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 SLC44A5Q8NCS7 719 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 SLAIN1Q8ND83 568 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 PI4K2BQ8TCG2 481 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 OTUD7AQ8TE49 926 aaPredicted RBP8.3□□□□□ -1.08
SF3B3-209ENST00000567635 PXYLP1Q8TE99 480 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 GTF3C2Q8WUA4 911 aaPredicted RBP8.3□□□□□ -1.08
SF3B3-209ENST00000567635 APPBP2Q92624 585 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 OSBP2Q969R2 916 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 CCDC17Q96LX7 622 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 RWDD1Q9H446 243 aaPredicted RBP8.3□□□□□ -1.08
SF3B3-209ENST00000567635 RBPJLQ9UBG7 517 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 PLXNB2O15031 1838 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 MYH4Q9Y623 1939 aa8.3□□□□□ -1.08
SF3B3-209ENST00000567635 RLFQ13129 1914 aa8.29□□□□□ -1.08
SF3B3-209ENST00000567635 HTTP42858 3142 aa8.29□□□□□ -1.08
SF3B3-209ENST00000567635 PATL2C9JE40 543 aaKnown RBP8.29□□□□□ -1.08
SF3B3-209ENST00000567635 APPP05067 770 aa8.29□□□□□ -1.08
SF3B3-209ENST00000567635 CCL5P13501 91 aa8.29□□□□□ -1.08
SF3B3-209ENST00000567635 GNAT2P19087 354 aa8.29□□□□□ -1.08
SF3B3-209ENST00000567635 MTFR1Q15390 333 aa8.29□□□□□ -1.08
SF3B3-209ENST00000567635 Q3C1V9 767 aa8.29□□□□□ -1.08
SF3B3-209ENST00000567635 C16orf86Q6ZW13 317 aa8.29□□□□□ -1.08
SF3B3-209ENST00000567635 CCAR1Q8IX12 1150 aaKnown RBP8.29□□□□□ -1.08
SF3B3-209ENST00000567635 NKX2-3Q8TAU0 364 aa8.29□□□□□ -1.08
SF3B3-209ENST00000567635 RNF208Q9H0X6 261 aa8.29□□□□□ -1.08
SF3B3-209ENST00000567635 ARHGEF10LQ9HCE6 1279 aa8.29□□□□□ -1.08
SF3B3-209ENST00000567635 TXNRD2Q9NNW7 524 aa8.29□□□□□ -1.08
SF3B3-209ENST00000567635 HOXC10Q9NYD6 342 aa8.29□□□□□ -1.08
SF3B3-209ENST00000567635 STAP2Q9UGK3 403 aa8.29□□□□□ -1.08
SF3B3-209ENST00000567635 GJD2Q9UKL4 321 aa8.29□□□□□ -1.08
SF3B3-209ENST00000567635 CENPFP49454 3210 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 A0A1W2PRG0 241 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 MINDY4BA8MYZ0 360 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 SMIM22K7EJ46 135 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 GPAA1O43292 621 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 PEX10O60683 326 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 GJB1P08034 283 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 AKR1B1P15121 316 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 ELNP15502 786 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 VCAM1P19320 739 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 MAPK4P31152 587 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 ERVK-9P63128 1117 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 ERVK-24P63145 666 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 COG2Q14746 738 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 POTEEQ6S8J3 1075 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 SIAH1Q8IUQ4 282 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 PAGR1Q9BTK6 254 aa8.28□□□□□ -1.08
SF3B3-209ENST00000567635 FSD1Q9BTV5 496 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms