RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 GPR108Q9NPR9 543 aa18.96■□□□□ 0.63
PALB2-205ENST00000567003 MTMR10Q9NXD2 777 aa18.96■□□□□ 0.63
PALB2-205ENST00000567003 DBNLQ9UJU6 430 aaKnown RBP18.96■□□□□ 0.63
PALB2-205ENST00000567003 IPO8O15397 1037 aaKnown RBP18.95■□□□□ 0.62
PALB2-205ENST00000567003 WDR78Q5VTH9 848 aa18.95■□□□□ 0.62
PALB2-205ENST00000567003 GPR153Q6NV75 609 aa18.95■□□□□ 0.62
PALB2-205ENST00000567003 TRMT44Q8IYL2 757 aaKnown RBP18.95■□□□□ 0.62
PALB2-205ENST00000567003 FEZ1Q99689 392 aa18.95■□□□□ 0.62
PALB2-205ENST00000567003 CCDC8Q9H0W5 538 aaPredicted RBP18.95■□□□□ 0.62
PALB2-205ENST00000567003 GINM1Q9NU53 330 aa18.95■□□□□ 0.62
PALB2-205ENST00000567003 SURF6O75683 361 aaKnown RBP18.94■□□□□ 0.62
PALB2-205ENST00000567003 MAP2K5Q13163 448 aa18.94■□□□□ 0.62
PALB2-205ENST00000567003 ACER1Q8TDN7 264 aa18.94■□□□□ 0.62
PALB2-205ENST00000567003 IDH1O75874 414 aaKnown RBP18.93■□□□□ 0.62
PALB2-205ENST00000567003 USP5P45974 858 aa18.93■□□□□ 0.62
PALB2-205ENST00000567003 RAB3GAP1Q15042 981 aa18.93■□□□□ 0.62
PALB2-205ENST00000567003 SSH3Q8TE77 659 aa18.93■□□□□ 0.62
PALB2-205ENST00000567003 GTF3C2Q8WUA4 911 aaPredicted RBP18.93■□□□□ 0.62
PALB2-205ENST00000567003 STXBP5LQ9Y2K9 1186 aa18.93■□□□□ 0.62
PALB2-205ENST00000567003 RABGAP1Q9Y3P9 1069 aa18.93■□□□□ 0.62
PALB2-205ENST00000567003 USP17L15C9J2P7 530 aa18.92■□□□□ 0.62
PALB2-205ENST00000567003 USP17L13C9JLJ4 530 aa18.92■□□□□ 0.62
PALB2-205ENST00000567003 USP17L11C9JVI0 530 aa18.92■□□□□ 0.62
PALB2-205ENST00000567003 USP17L18D6R9N7 530 aa18.92■□□□□ 0.62
PALB2-205ENST00000567003 USP17L22D6RA61 530 aa18.92■□□□□ 0.62
PALB2-205ENST00000567003 USP17L17D6RBQ6 530 aa18.92■□□□□ 0.62
PALB2-205ENST00000567003 USP17L19D6RCP7 530 aa18.92■□□□□ 0.62
PALB2-205ENST00000567003 USP17L20D6RJB6 530 aa18.92■□□□□ 0.62
PALB2-205ENST00000567003 USP17L24Q0WX57 530 aa18.92■□□□□ 0.62
PALB2-205ENST00000567003 MAGEB6Q8N7X4 407 aa18.92■□□□□ 0.62
PALB2-205ENST00000567003 EDC3Q96F86 508 aaKnown RBP18.92■□□□□ 0.62
PALB2-205ENST00000567003 C12orf42Q96LP6 360 aa18.92■□□□□ 0.62
PALB2-205ENST00000567003 SENP6Q9GZR1 1112 aaPredicted RBP18.92■□□□□ 0.62
PALB2-205ENST00000567003 BTBD7Q9P203 1132 aa18.92■□□□□ 0.62
PALB2-205ENST00000567003 EYSQ5T1H1 3165 aa18.92■□□□□ 0.62
PALB2-205ENST00000567003 VCAM1P19320 739 aa18.91■□□□□ 0.62
PALB2-205ENST00000567003 ATN1P54259 1190 aaPredicted RBP18.91■□□□□ 0.62
PALB2-205ENST00000567003 ATP8B2P98198 1209 aa18.91■□□□□ 0.62
PALB2-205ENST00000567003 EVX2Q03828 476 aa18.91■□□□□ 0.62
PALB2-205ENST00000567003 TATDN1Q6P1N9 297 aa18.91■□□□□ 0.62
PALB2-205ENST00000567003 CATSPERGQ6ZRH7 1159 aa18.91■□□□□ 0.62
PALB2-205ENST00000567003 NPLOC4Q8TAT6 608 aa18.91■□□□□ 0.62
PALB2-205ENST00000567003 EAF2Q96CJ1 260 aaPredicted RBP18.91■□□□□ 0.62
PALB2-205ENST00000567003 ZNF512BQ96KM6 892 aaPredicted RBP18.91■□□□□ 0.62
PALB2-205ENST00000567003 ANTXR1Q9H6X2 564 aa18.91■□□□□ 0.62
PALB2-205ENST00000567003 NAV1Q8NEY1 1877 aa18.9■□□□□ 0.62
PALB2-205ENST00000567003 PTPREP23469 700 aa18.9■□□□□ 0.62
PALB2-205ENST00000567003 CNGA1P29973 690 aa18.9■□□□□ 0.62
PALB2-205ENST00000567003 CYP2C19P33261 490 aa18.9■□□□□ 0.62
PALB2-205ENST00000567003 MFSD14CQ5VZR4 134 aa18.9■□□□□ 0.62
PALB2-205ENST00000567003 TRPV1Q8NER1 839 aa18.9■□□□□ 0.62
PALB2-205ENST00000567003 SERPINB13Q9UIV8 391 aa18.9■□□□□ 0.62
PALB2-205ENST00000567003 SPDYE16A6NNV3 312 aaPredicted RBP18.89■□□□□ 0.61
PALB2-205ENST00000567003 SHMT1P34896 483 aa18.89■□□□□ 0.61
PALB2-205ENST00000567003 CCNA1P78396 465 aa18.89■□□□□ 0.61
PALB2-205ENST00000567003 ABCB5Q2M3G0 1257 aa18.89■□□□□ 0.61
PALB2-205ENST00000567003 CERKLQ49MI3 558 aaPredicted RBP18.89■□□□□ 0.61
PALB2-205ENST00000567003 FAM161BQ96MY7 647 aa18.89■□□□□ 0.61
PALB2-205ENST00000567003 RPAP3Q9H6T3 665 aaPredicted RBP18.89■□□□□ 0.61
PALB2-205ENST00000567003 DDX20Q9UHI6 824 aaKnown RBP18.89■□□□□ 0.61
PALB2-205ENST00000567003 SLC15A5A6NIM6 579 aa18.88■□□□□ 0.61
PALB2-205ENST00000567003 GLRX3O76003 335 aaKnown RBP18.88■□□□□ 0.61
PALB2-205ENST00000567003 GUCY1A2P33402 732 aa18.88■□□□□ 0.61
PALB2-205ENST00000567003 PLCD1P51178 756 aa18.88■□□□□ 0.61
PALB2-205ENST00000567003 USP14P54578 494 aa18.88■□□□□ 0.61
PALB2-205ENST00000567003 ATP2B2Q01814 1243 aa18.88■□□□□ 0.61
PALB2-205ENST00000567003 GRB14Q14449 540 aa18.88■□□□□ 0.61
PALB2-205ENST00000567003 ZKSCAN2Q63HK3 967 aa18.88■□□□□ 0.61
PALB2-205ENST00000567003 GUCD1Q96NT3 240 aa18.88■□□□□ 0.61
PALB2-205ENST00000567003 KIAA1683Q9H0B3 1180 aa18.88■□□□□ 0.61
PALB2-205ENST00000567003 EHD4Q9H223 541 aa18.88■□□□□ 0.61
PALB2-205ENST00000567003 VCANP13611 3396 aa18.88■□□□□ 0.61
PALB2-205ENST00000567003 LTBP2Q14767 1821 aa18.88■□□□□ 0.61
PALB2-205ENST00000567003 ANO1Q5XXA6 986 aa18.87■□□□□ 0.61
PALB2-205ENST00000567003 NOP58Q9Y2X3 529 aaKnown RBP18.87■□□□□ 0.61
PALB2-205ENST00000567003 IVNS1ABPQ9Y6Y0 642 aa18.87■□□□□ 0.61
PALB2-205ENST00000567003 RLBP1P12271 317 aa18.86■□□□□ 0.61
PALB2-205ENST00000567003 RTP1P59025 263 aa18.86■□□□□ 0.61
PALB2-205ENST00000567003 SEPT2Q15019 361 aa18.86■□□□□ 0.61
PALB2-205ENST00000567003 GJC2Q5T442 439 aaPredicted RBP18.86■□□□□ 0.61
PALB2-205ENST00000567003 RLFQ13129 1914 aa18.86■□□□□ 0.61
PALB2-205ENST00000567003 A0A1W2PRG0 241 aa18.85■□□□□ 0.61
PALB2-205ENST00000567003 HOXC6P09630 235 aa18.85■□□□□ 0.61
PALB2-205ENST00000567003 LBX2Q6XYB7 198 aa18.85■□□□□ 0.61
PALB2-205ENST00000567003 TTC6Q86TZ1 520 aa18.85■□□□□ 0.61
PALB2-205ENST00000567003 LPAR1Q92633 364 aa18.85■□□□□ 0.61
PALB2-205ENST00000567003 LBHD1Q9BQE6 289 aaPredicted RBP18.85■□□□□ 0.61
PALB2-205ENST00000567003 RIOK1Q9BRS2 568 aaKnown RBP18.85■□□□□ 0.61
PALB2-205ENST00000567003 CABP5Q9NP86 173 aa18.85■□□□□ 0.61
PALB2-205ENST00000567003 ATP11BQ9Y2G3 1177 aa18.85■□□□□ 0.61
PALB2-205ENST00000567003 PRUNE2Q8WUY3 3088 aa18.85■□□□□ 0.61
PALB2-205ENST00000567003 CDH23Q9H251 3354 aa18.84■□□□□ 0.61
PALB2-205ENST00000567003 A0A0G2JMZ2 1700 aa18.84■□□□□ 0.61
PALB2-205ENST00000567003 CYBAP13498 195 aa18.84■□□□□ 0.61
PALB2-205ENST00000567003 KIAA1755Q5JYT7 1200 aa18.84■□□□□ 0.61
PALB2-205ENST00000567003 ITPRIPQ8IWB1 547 aa18.84■□□□□ 0.61
PALB2-205ENST00000567003 MOV10L1Q9BXT6 1211 aaKnown RBP18.84■□□□□ 0.61
PALB2-205ENST00000567003 EXOC6BQ9Y2D4 811 aa18.84■□□□□ 0.61
PALB2-205ENST00000567003 ZNF236Q9UL36 1845 aa18.84■□□□□ 0.61
PALB2-205ENST00000567003 POTEB2H3BUK9 544 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms