RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 KANK3Q6NY19 840 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 TMC4Q7Z404 712 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 BRIP1Q9BX63 1249 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 ARMT1Q9H993 441 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 LRP2BPQ9P2M1 347 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 CEP131Q9UPN4 1083 aa19.21■□□□□ 0.67
CMTM3-213ENST00000566756 CACNA1SQ13698 1873 aa19.2■□□□□ 0.66
CMTM3-213ENST00000566756 CTDSPL2Q05D32 466 aa19.2■□□□□ 0.66
CMTM3-213ENST00000566756 CT47A1Q5JQC4 288 aaPredicted RBP19.2■□□□□ 0.66
CMTM3-213ENST00000566756 TMED8Q6PL24 325 aaPredicted RBP19.2■□□□□ 0.66
CMTM3-213ENST00000566756 DIS3L2Q8IYB7 885 aaKnown RBP19.2■□□□□ 0.66
CMTM3-213ENST00000566756 CAMKK2Q96RR4 588 aa19.2■□□□□ 0.66
CMTM3-213ENST00000566756 PCDHA5Q9Y5H7 936 aa19.2■□□□□ 0.66
CMTM3-213ENST00000566756 PHLPP2Q6ZVD8 1323 aa19.2■□□□□ 0.66
CMTM3-213ENST00000566756 SERPINC1P01008 464 aa19.19■□□□□ 0.66
CMTM3-213ENST00000566756 CCDC93Q567U6 631 aa19.19■□□□□ 0.66
CMTM3-213ENST00000566756 STK11IPQ8N1F8 1099 aa19.19■□□□□ 0.66
CMTM3-213ENST00000566756 CRACR2BQ8N4Y2 399 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-213ENST00000566756 MLKLQ8NB16 471 aa19.19■□□□□ 0.66
CMTM3-213ENST00000566756 CLIC6Q96NY7 704 aa19.19■□□□□ 0.66
CMTM3-213ENST00000566756 ANAPC4Q9UJX5 808 aa19.19■□□□□ 0.66
CMTM3-213ENST00000566756 FBXO2Q9UK22 296 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-213ENST00000566756 TACC3Q9Y6A5 838 aa19.19■□□□□ 0.66
CMTM3-213ENST00000566756 CCDC88AQ3V6T2 1871 aa19.19■□□□□ 0.66
CMTM3-213ENST00000566756 ATP1A3P13637 1013 aa19.19■□□□□ 0.66
CMTM3-213ENST00000566756 TOB1P50616 345 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-213ENST00000566756 FOXP4Q8IVH2 680 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-213ENST00000566756 PKNOX2Q96KN3 472 aa19.19■□□□□ 0.66
CMTM3-213ENST00000566756 MYL10Q9BUA6 226 aa19.19■□□□□ 0.66
CMTM3-213ENST00000566756 ANKIB1Q9P2G1 1089 aa19.19■□□□□ 0.66
CMTM3-213ENST00000566756 KLRK1P26718 216 aa19.18■□□□□ 0.66
CMTM3-213ENST00000566756 TDO2P48775 406 aa19.18■□□□□ 0.66
CMTM3-213ENST00000566756 SARSP49591 514 aaKnown RBP19.18■□□□□ 0.66
CMTM3-213ENST00000566756 IQSEC3Q9UPP2 1182 aaPredicted RBP19.18■□□□□ 0.66
CMTM3-213ENST00000566756 SRPRBQ9Y5M8 271 aaKnown RBP19.18■□□□□ 0.66
CMTM3-213ENST00000566756 SLC4A4Q9Y6R1 1079 aa19.18■□□□□ 0.66
CMTM3-213ENST00000566756 BTBD18B2RXH4 712 aa19.17■□□□□ 0.66
CMTM3-213ENST00000566756 ETF1P62495 437 aaKnown RBP19.17■□□□□ 0.66
CMTM3-213ENST00000566756 POSTNQ15063 836 aa19.17■□□□□ 0.66
CMTM3-213ENST00000566756 CFAP100Q494V2 611 aa19.17■□□□□ 0.66
CMTM3-213ENST00000566756 RNF26Q9BY78 433 aaPredicted RBP19.17■□□□□ 0.66
CMTM3-213ENST00000566756 PODXL2Q9NZ53 605 aa19.17■□□□□ 0.66
CMTM3-213ENST00000566756 KIAA1551Q9HCM1 1747 aa19.17■□□□□ 0.66
CMTM3-213ENST00000566756 TOP1P11387 765 aaKnown RBP19.17■□□□□ 0.66
CMTM3-213ENST00000566756 ATP2B4P23634 1241 aa19.17■□□□□ 0.66
CMTM3-213ENST00000566756 LCORLQ8N3X6 602 aa19.17■□□□□ 0.66
CMTM3-213ENST00000566756 ENOX1Q8TC92 643 aaKnown RBP19.17■□□□□ 0.66
CMTM3-213ENST00000566756 PARP3Q9Y6F1 533 aa19.17■□□□□ 0.66
CMTM3-213ENST00000566756 LTBP1Q14766 1721 aa19.16■□□□□ 0.66
CMTM3-213ENST00000566756 MAST2Q6P0Q8 1798 aa19.16■□□□□ 0.66
CMTM3-213ENST00000566756 NAA30Q147X3 362 aaPredicted RBP19.16■□□□□ 0.66
CMTM3-213ENST00000566756 SLC15A2Q16348 729 aa19.16■□□□□ 0.66
CMTM3-213ENST00000566756 FANCBQ8NB91 859 aa19.16■□□□□ 0.66
CMTM3-213ENST00000566756 CCDC34Q96HJ3 373 aa19.16■□□□□ 0.66
CMTM3-213ENST00000566756 SRRTQ9BXP5 876 aaKnown RBP19.16■□□□□ 0.66
CMTM3-213ENST00000566756 INCENPQ9NQS7 918 aa19.16■□□□□ 0.66
CMTM3-213ENST00000566756 ABCF2Q9UG63 623 aa19.16■□□□□ 0.66
CMTM3-213ENST00000566756 GOLGA6L9A6NEM1 432 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 ARHGAP6O43182 974 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 ZSCAN12O43309 604 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 PCP11498 1178 aaKnown RBP19.15■□□□□ 0.66
CMTM3-213ENST00000566756 ZNF18P17022 549 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 TBX2Q13207 712 aaPredicted RBP19.15■□□□□ 0.66
CMTM3-213ENST00000566756 MORC3Q14149 939 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 EZH2Q15910 746 aaKnown RBP19.15■□□□□ 0.66
CMTM3-213ENST00000566756 ISM2Q6H9L7 571 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 TXNRD3Q86VQ6 643 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 ZNF654Q8IZM8 581 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 SPATA20Q8TB22 786 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 DPF2Q92785 391 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 FANCLQ9NW38 375 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 MAN1B1Q9UKM7 699 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 SPDYE4A6NLX3 237 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 MMP10P09238 476 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 BMP6P22004 513 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 GUCY1A2P33402 732 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 PDE6BP35913 854 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 GPSM2P81274 684 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 GABPB1Q06547 395 aaPredicted RBP19.15■□□□□ 0.66
CMTM3-213ENST00000566756 PPARAQ07869 468 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 SYT10Q6XYQ8 523 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 FAM53CQ9NYF3 392 aa19.15■□□□□ 0.66
CMTM3-213ENST00000566756 PRKAB2O43741 272 aa19.14■□□□□ 0.65
CMTM3-213ENST00000566756 BMP15O95972 392 aa19.14■□□□□ 0.65
CMTM3-213ENST00000566756 SRGNP10124 158 aa19.14■□□□□ 0.65
CMTM3-213ENST00000566756 NPR1P16066 1061 aa19.14■□□□□ 0.65
CMTM3-213ENST00000566756 XBP1P17861 261 aa19.14■□□□□ 0.65
CMTM3-213ENST00000566756 CYP7A1P22680 504 aa19.14■□□□□ 0.65
CMTM3-213ENST00000566756 ERCC5P28715 1186 aaPredicted RBP19.14■□□□□ 0.65
CMTM3-213ENST00000566756 EN1Q05925 392 aaPredicted RBP19.14■□□□□ 0.65
CMTM3-213ENST00000566756 SEC23AQ15436 765 aa19.14■□□□□ 0.65
CMTM3-213ENST00000566756 SP8Q8IXZ3 490 aa19.14■□□□□ 0.65
CMTM3-213ENST00000566756 ESR2Q92731 530 aa19.14■□□□□ 0.65
CMTM3-213ENST00000566756 SMARCE1Q969G3 411 aa19.14■□□□□ 0.65
CMTM3-213ENST00000566756 UBAC1Q9BSL1 405 aa19.14■□□□□ 0.65
CMTM3-213ENST00000566756 RAI14Q9P0K7 980 aa19.14■□□□□ 0.65
CMTM3-213ENST00000566756 KMT5BQ4FZB7 885 aa19.13■□□□□ 0.65
CMTM3-213ENST00000566756 ZNF804AQ7Z570 1209 aa19.13■□□□□ 0.65
CMTM3-213ENST00000566756 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.13■□□□□ 0.65
CMTM3-213ENST00000566756 STK32BQ9NY57 414 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms