RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 ABCB5Q2M3G0 1257 aa14.47□□□□□ -0.09
UBR1-206ENST00000566493 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.47□□□□□ -0.09
UBR1-206ENST00000566493 DNAJC2Q99543 621 aaKnown RBP14.47□□□□□ -0.09
UBR1-206ENST00000566493 NUDT12Q9BQG2 462 aa14.47□□□□□ -0.09
UBR1-206ENST00000566493 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.47□□□□□ -0.09
UBR1-206ENST00000566493 HMX1Q9NP08 348 aaPredicted RBP14.47□□□□□ -0.09
UBR1-206ENST00000566493 EMILIN3Q9NT22 766 aa14.47□□□□□ -0.09
UBR1-206ENST00000566493 USP17L15C9J2P7 530 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 USP17L13C9JLJ4 530 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 USP17L11C9JVI0 530 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 USP17L18D6R9N7 530 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 USP17L22D6RA61 530 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 USP17L17D6RBQ6 530 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 USP17L19D6RCP7 530 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 USP17L20D6RJB6 530 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 GOLIM4O00461 696 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 PDE6AP16499 860 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 CYP2B6P20813 491 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 ERVK-9P63128 1117 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 ERVK-24P63145 666 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 USP17L24Q0WX57 530 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 ZYXQ15942 572 aaKnown RBP14.46□□□□□ -0.09
UBR1-206ENST00000566493 SOCS4Q8WXH5 440 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 RIOK1Q9BRS2 568 aaKnown RBP14.46□□□□□ -0.09
UBR1-206ENST00000566493 PAGR1Q9BTK6 254 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 CRISPLD2Q9H0B8 497 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 ZBTB40Q9NUA8 1239 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 RBPJLQ9UBG7 517 aa14.46□□□□□ -0.09
UBR1-206ENST00000566493 RPTORQ8N122 1335 aa14.45□□□□□ -0.1
UBR1-206ENST00000566493 ZNF532Q9HCE3 1301 aa14.45□□□□□ -0.1
UBR1-206ENST00000566493 EVI5O60447 810 aa14.45□□□□□ -0.1
UBR1-206ENST00000566493 PLCD1P51178 756 aa14.45□□□□□ -0.1
UBR1-206ENST00000566493 NECAB2Q7Z6G3 386 aa14.45□□□□□ -0.1
UBR1-206ENST00000566493 TRMT44Q8IYL2 757 aaKnown RBP14.45□□□□□ -0.1
UBR1-206ENST00000566493 NAV1Q8NEY1 1877 aa14.45□□□□□ -0.1
UBR1-206ENST00000566493 C12orf42Q96LP6 360 aa14.45□□□□□ -0.1
UBR1-206ENST00000566493 TXNRD2Q9NNW7 524 aa14.45□□□□□ -0.1
UBR1-206ENST00000566493 MCM9Q9NXL9 1143 aa14.45□□□□□ -0.1
UBR1-206ENST00000566493 PEX10O60683 326 aa14.44□□□□□ -0.1
UBR1-206ENST00000566493 GLRX3O76003 335 aaKnown RBP14.44□□□□□ -0.1
UBR1-206ENST00000566493 XRCC5P13010 732 aaKnown RBP14.44□□□□□ -0.1
UBR1-206ENST00000566493 SHMT1P34896 483 aa14.44□□□□□ -0.1
UBR1-206ENST00000566493 FXR1P51114 621 aaKnown RBP eCLIP14.44□□□□□ -0.1
UBR1-206ENST00000566493 CCNA1P78396 465 aa14.44□□□□□ -0.1
UBR1-206ENST00000566493 PLEKHH3Q7Z736 793 aa14.44□□□□□ -0.1
UBR1-206ENST00000566493 ANKLE1Q8NAG6 615 aa14.44□□□□□ -0.1
UBR1-206ENST00000566493 PAWRQ96IZ0 340 aaKnown RBP14.44□□□□□ -0.1
UBR1-206ENST00000566493 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.44□□□□□ -0.1
UBR1-206ENST00000566493 KIAA1683Q9H0B3 1180 aa14.44□□□□□ -0.1
UBR1-206ENST00000566493 RCAN3Q9UKA8 241 aa14.44□□□□□ -0.1
UBR1-206ENST00000566493 PLXNB2O15031 1838 aa14.43□□□□□ -0.1
UBR1-206ENST00000566493 MPHOSPH10O00566 681 aaKnown RBP14.43□□□□□ -0.1
UBR1-206ENST00000566493 RGS2P41220 211 aa14.43□□□□□ -0.1
UBR1-206ENST00000566493 TRIM32Q13049 653 aa14.43□□□□□ -0.1
UBR1-206ENST00000566493 Q3C1V9 767 aa14.43□□□□□ -0.1
UBR1-206ENST00000566493 SIRT2Q8IXJ6 389 aa14.43□□□□□ -0.1
UBR1-206ENST00000566493 TRIB2Q92519 343 aa14.43□□□□□ -0.1
UBR1-206ENST00000566493 PAG1Q9NWQ8 432 aa14.43□□□□□ -0.1
UBR1-206ENST00000566493 RABGAP1Q9Y3P9 1069 aa14.43□□□□□ -0.1
UBR1-206ENST00000566493 ZKSCAN1P17029 563 aaPredicted RBP14.42□□□□□ -0.1
UBR1-206ENST00000566493 WDR78Q5VTH9 848 aa14.42□□□□□ -0.1
UBR1-206ENST00000566493 CATSPERGQ6ZRH7 1159 aa14.42□□□□□ -0.1
UBR1-206ENST00000566493 GPR142Q7Z601 462 aa14.42□□□□□ -0.1
UBR1-206ENST00000566493 AMOTL1Q8IY63 956 aa14.42□□□□□ -0.1
UBR1-206ENST00000566493 LCORLQ8N3X6 602 aa14.42□□□□□ -0.1
UBR1-206ENST00000566493 ACER1Q8TDN7 264 aa14.42□□□□□ -0.1
UBR1-206ENST00000566493 SDR42E1Q8WUS8 393 aa14.42□□□□□ -0.1
UBR1-206ENST00000566493 PORCNQ9H237 461 aa14.42□□□□□ -0.1
UBR1-206ENST00000566493 BOLA2Q9H3K6 86 aa14.42□□□□□ -0.1
UBR1-206ENST00000566493 TCRBV5S4A2TA0A5A2 114 aa14.41□□□□□ -0.1
UBR1-206ENST00000566493 ATP5JP18859 108 aa14.41□□□□□ -0.1
UBR1-206ENST00000566493 VCAM1P19320 739 aa14.41□□□□□ -0.1
UBR1-206ENST00000566493 EVX2Q03828 476 aa14.41□□□□□ -0.1
UBR1-206ENST00000566493 GABPAQ06546 454 aa14.41□□□□□ -0.1
UBR1-206ENST00000566493 SEPT2Q15019 361 aa14.41□□□□□ -0.1
UBR1-206ENST00000566493 DDRGK1Q96HY6 314 aa14.41□□□□□ -0.1
UBR1-206ENST00000566493 NBPF3Q9H094 633 aa14.41□□□□□ -0.1
UBR1-206ENST00000566493 RPAP3Q9H6T3 665 aaPredicted RBP14.41□□□□□ -0.1
UBR1-206ENST00000566493 ARMT1Q9H993 441 aa14.41□□□□□ -0.1
UBR1-206ENST00000566493 DCP1AQ9NPI6 582 aaPredicted RBP14.41□□□□□ -0.1
UBR1-206ENST00000566493 RBM27Q9P2N5 1060 aaKnown RBP14.41□□□□□ -0.1
UBR1-206ENST00000566493 SWAP70Q9UH65 585 aa14.41□□□□□ -0.1
UBR1-206ENST00000566493 DDX60LQ5H9U9 1706 aaKnown RBP14.41□□□□□ -0.1
UBR1-206ENST00000566493 MBD4O95243 580 aa14.4□□□□□ -0.1
UBR1-206ENST00000566493 ADD2P35612 726 aa14.4□□□□□ -0.1
UBR1-206ENST00000566493 MORN1Q5T089 497 aa14.4□□□□□ -0.1
UBR1-206ENST00000566493 MAP3K21Q5TCX8 1036 aa14.4□□□□□ -0.1
UBR1-206ENST00000566493 DIS3LQ8TF46 1054 aaKnown RBP14.4□□□□□ -0.1
UBR1-206ENST00000566493 USP6NLQ92738 828 aa14.4□□□□□ -0.1
UBR1-206ENST00000566493 EDC3Q96F86 508 aaKnown RBP14.4□□□□□ -0.1
UBR1-206ENST00000566493 APBA2Q99767 749 aa14.4□□□□□ -0.1
UBR1-206ENST00000566493 HAUS7Q99871 368 aa14.4□□□□□ -0.1
UBR1-206ENST00000566493 LRRCC1Q9C099 1032 aa14.4□□□□□ -0.1
UBR1-206ENST00000566493 ATP8A2Q9NTI2 1148 aa14.4□□□□□ -0.1
UBR1-206ENST00000566493 IVNS1ABPQ9Y6Y0 642 aa14.4□□□□□ -0.1
UBR1-206ENST00000566493 MYH8P13535 1937 aa14.39□□□□□ -0.11
UBR1-206ENST00000566493 CNMDO75829 334 aa14.39□□□□□ -0.11
UBR1-206ENST00000566493 GUCY1A2P33402 732 aa14.39□□□□□ -0.11
UBR1-206ENST00000566493 CACNB2Q08289 660 aaPredicted RBP14.39□□□□□ -0.11
UBR1-206ENST00000566493 MAP2K5Q13163 448 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms