RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 V9GY48 417 aaPredicted RBP13.18□□□□□ -0.3
LINC00562-201ENST00000566385 STK36Q9NRP7 1315 aa13.18□□□□□ -0.3
LINC00562-201ENST00000566385 SYCE3A1L190 88 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 DDAH1O94760 285 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 SHROOM1Q2M3G4 852 aaPredicted RBP13.17□□□□□ -0.3
LINC00562-201ENST00000566385 CFAP100Q494V2 611 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 DNAJC18Q9H819 358 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 SERPINB13Q9UIV8 391 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 NFKBIEO00221 500 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 VIL1P09327 827 aaKnown RBP13.17□□□□□ -0.3
LINC00562-201ENST00000566385 AKR1B1P15121 316 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 HDLBPQ00341 1268 aaKnown RBP13.17□□□□□ -0.3
LINC00562-201ENST00000566385 RSBN1LQ6PCB5 846 aaPredicted RBP13.17□□□□□ -0.3
LINC00562-201ENST00000566385 TMTC3Q6ZXV5 915 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 TRIM22Q8IYM9 498 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 NLGN2Q8NFZ4 835 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 NEDD1Q8NHV4 660 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 GMLQ99445 158 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 TCP11L1Q9NUJ3 509 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 BCS1LQ9Y276 419 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 CLIC4Q9Y696 253 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 ELP1O95163 1332 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 SIPA1L1O43166 1804 aa13.17□□□□□ -0.3
LINC00562-201ENST00000566385 FER1L6Q2WGJ9 1857 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 MYH8P13535 1937 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 BTBD18B2RXH4 712 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 DEXIO95424 95 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 LIG1P18858 919 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 SHMT1P34896 483 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 EIF6P56537 245 aaKnown RBP13.16□□□□□ -0.3
LINC00562-201ENST00000566385 SLC35G1Q2M3R5 365 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 GRIPAP1Q4V328 841 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 MYSM1Q5VVJ2 828 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 ANKS1AQ92625 1134 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 RNF26Q9BY78 433 aaPredicted RBP13.16□□□□□ -0.3
LINC00562-201ENST00000566385 CPVLQ9H3G5 476 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 GOLGA6L3A6NEY3 463 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 GOLGA8HP0CJ92 632 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 CALM1P0DP23 149 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 CALM2P0DP24 149 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 CALM3P0DP25 149 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 CXCL9Q07325 125 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 PPP2R5BQ15173 497 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 CTCFLQ8NI51 663 aaPredicted RBP13.16□□□□□ -0.3
LINC00562-201ENST00000566385 ZNF287Q9HBT7 754 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 VPS54Q9P1Q0 977 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 CFAP45Q9UL16 551 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 CNTNAP5Q8WYK1 1306 aa13.16□□□□□ -0.3
LINC00562-201ENST00000566385 SHTN1A0MZ66 631 aa13.15□□□□□ -0.3
LINC00562-201ENST00000566385 PRELPP51888 382 aa13.15□□□□□ -0.3
LINC00562-201ENST00000566385 NR5A1Q13285 461 aa13.15□□□□□ -0.3
LINC00562-201ENST00000566385 OXER1Q8TDS5 423 aa13.15□□□□□ -0.3
LINC00562-201ENST00000566385 IDI2Q9BXS1 227 aa13.15□□□□□ -0.3
LINC00562-201ENST00000566385 RBM28Q9NW13 759 aaKnown RBP13.15□□□□□ -0.3
LINC00562-201ENST00000566385 MAD2L2Q9UI95 211 aa13.15□□□□□ -0.3
LINC00562-201ENST00000566385 RCOR1Q9UKL0 485 aa13.15□□□□□ -0.3
LINC00562-201ENST00000566385 ZNRF3Q9ULT6 936 aa13.15□□□□□ -0.3
LINC00562-201ENST00000566385 CLRN2A0PK11 232 aa13.15□□□□□ -0.3
LINC00562-201ENST00000566385 MMP1P03956 469 aa13.15□□□□□ -0.3
LINC00562-201ENST00000566385 CSPP1Q1MSJ5 1256 aa13.15□□□□□ -0.3
LINC00562-201ENST00000566385 ADAMTS3O15072 1205 aa13.14□□□□□ -0.31
LINC00562-201ENST00000566385 PRPF3O43395 683 aaKnown RBP13.14□□□□□ -0.31
LINC00562-201ENST00000566385 U2AF2P26368 475 aaKnown RBP eCLIP13.14□□□□□ -0.31
LINC00562-201ENST00000566385 ZNF445P59923 1031 aa13.14□□□□□ -0.31
LINC00562-201ENST00000566385 TRIM29Q14134 588 aa13.14□□□□□ -0.31
LINC00562-201ENST00000566385 ZSCAN29Q8IWY8 852 aaPredicted RBP13.14□□□□□ -0.31
LINC00562-201ENST00000566385 NIM1KQ8IY84 436 aa13.14□□□□□ -0.31
LINC00562-201ENST00000566385 DIS3L2Q8IYB7 885 aaKnown RBP13.14□□□□□ -0.31
LINC00562-201ENST00000566385 TAOK3Q9H2K8 898 aa13.14□□□□□ -0.31
LINC00562-201ENST00000566385 CYTH3O43739 400 aa13.14□□□□□ -0.31
LINC00562-201ENST00000566385 XRCC6P12956 609 aaKnown RBP eCLIP13.14□□□□□ -0.31
LINC00562-201ENST00000566385 BRAPQ7Z569 592 aa13.14□□□□□ -0.31
LINC00562-201ENST00000566385 SCAF8Q9UPN6 1271 aaKnown RBP13.14□□□□□ -0.31
LINC00562-201ENST00000566385 SPDYE2BA6NHP3 402 aa13.13□□□□□ -0.31
LINC00562-201ENST00000566385 SPDYE6P0CI01 402 aa13.13□□□□□ -0.31
LINC00562-201ENST00000566385 RASSF7Q02833 373 aa13.13□□□□□ -0.31
LINC00562-201ENST00000566385 SOGA3Q5TF21 947 aa13.13□□□□□ -0.31
LINC00562-201ENST00000566385 USP17L2Q6R6M4 530 aa13.13□□□□□ -0.31
LINC00562-201ENST00000566385 LINC00301Q8NCQ3 95 aa13.13□□□□□ -0.31
LINC00562-201ENST00000566385 WASF1Q92558 559 aa13.13□□□□□ -0.31
LINC00562-201ENST00000566385 ZNF396Q96N95 335 aaPredicted RBP13.13□□□□□ -0.31
LINC00562-201ENST00000566385 PANK2Q9BZ23 570 aa13.13□□□□□ -0.31
LINC00562-201ENST00000566385 MTMR4Q9NYA4 1195 aa13.13□□□□□ -0.31
LINC00562-201ENST00000566385 CD2APQ9Y5K6 639 aa13.13□□□□□ -0.31
LINC00562-201ENST00000566385 TCP10L2B9ZVM9 353 aa13.13□□□□□ -0.31
LINC00562-201ENST00000566385 NR1I2O75469 434 aa13.13□□□□□ -0.31
LINC00562-201ENST00000566385 HLA-DOAP06340 250 aa13.13□□□□□ -0.31
LINC00562-201ENST00000566385 NOVP48745 357 aa13.13□□□□□ -0.31
LINC00562-201ENST00000566385 AKAP17AQ02040 695 aaKnown RBP13.13□□□□□ -0.31
LINC00562-201ENST00000566385 GNL2Q13823 731 aaKnown RBP13.13□□□□□ -0.31
LINC00562-201ENST00000566385 RTEL1Q9NZ71 1219 aa13.13□□□□□ -0.31
LINC00562-201ENST00000566385 GOLGA6L4A6NEF3 574 aa13.12□□□□□ -0.31
LINC00562-201ENST00000566385 FAM205CA6NFA0 338 aa13.12□□□□□ -0.31
LINC00562-201ENST00000566385 GRM4Q14833 912 aa13.12□□□□□ -0.31
LINC00562-201ENST00000566385 NPY5RQ15761 445 aa13.12□□□□□ -0.31
LINC00562-201ENST00000566385 NOM1Q5C9Z4 860 aaKnown RBP13.12□□□□□ -0.31
LINC00562-201ENST00000566385 EARS2Q5JPH6 523 aaKnown RBP13.12□□□□□ -0.31
LINC00562-201ENST00000566385 CDAN1Q8IWY9 1227 aa13.12□□□□□ -0.31
LINC00562-201ENST00000566385 LRRC47Q8N1G4 583 aaKnown RBP13.12□□□□□ -0.31
LINC00562-201ENST00000566385 PCDHA7Q9UN72 937 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms