RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 TUBE1Q9UJT0 475 aa15.33■□□□□ 0.04
LINC00563-201ENST00000566370 R3HCC1Q9Y3T6 440 aaKnown RBP15.33■□□□□ 0.04
LINC00563-201ENST00000566370 SRPRBQ9Y5M8 271 aaKnown RBP15.33■□□□□ 0.04
LINC00563-201ENST00000566370 V9GY48 417 aaPredicted RBP15.33■□□□□ 0.04
LINC00563-201ENST00000566370 WTIPA6NIX2 430 aaPredicted RBP15.32■□□□□ 0.04
LINC00563-201ENST00000566370 AP5Z1O43299 807 aa15.32■□□□□ 0.04
LINC00563-201ENST00000566370 SMC2O95347 1197 aa15.32■□□□□ 0.04
LINC00563-201ENST00000566370 IL1R1P14778 569 aa15.32■□□□□ 0.04
LINC00563-201ENST00000566370 GUCY1A2P33402 732 aa15.32■□□□□ 0.04
LINC00563-201ENST00000566370 HSPA1LP34931 641 aa15.32■□□□□ 0.04
LINC00563-201ENST00000566370 NLRP5P59047 1200 aa15.32■□□□□ 0.04
LINC00563-201ENST00000566370 GPSM2P81274 684 aa15.32■□□□□ 0.04
LINC00563-201ENST00000566370 CCDC186Q7Z3E2 898 aa15.32■□□□□ 0.04
LINC00563-201ENST00000566370 DHX40Q8IX18 779 aaKnown RBP15.32■□□□□ 0.04
LINC00563-201ENST00000566370 CCDC148Q8NFR7 591 aa15.32■□□□□ 0.04
LINC00563-201ENST00000566370 ANKS1AQ92625 1134 aa15.32■□□□□ 0.04
LINC00563-201ENST00000566370 PRIMPOLQ96LW4 560 aa15.32■□□□□ 0.04
LINC00563-201ENST00000566370 CD209Q9NNX6 404 aa15.32■□□□□ 0.04
LINC00563-201ENST00000566370 CABP5Q9NP86 173 aa15.32■□□□□ 0.04
LINC00563-201ENST00000566370 TCP11L1Q9NUJ3 509 aa15.32■□□□□ 0.04
LINC00563-201ENST00000566370 SPTLC3Q9NUV7 552 aa15.32■□□□□ 0.04
LINC00563-201ENST00000566370 SCG2P13521 617 aa15.31■□□□□ 0.04
LINC00563-201ENST00000566370 TFAP4Q01664 338 aa15.31■□□□□ 0.04
LINC00563-201ENST00000566370 GALNT17Q6IS24 598 aa15.31■□□□□ 0.04
LINC00563-201ENST00000566370 TXNRD3Q86VQ6 643 aa15.31■□□□□ 0.04
LINC00563-201ENST00000566370 TRIML1Q8N9V2 468 aa15.31■□□□□ 0.04
LINC00563-201ENST00000566370 LRRC4BQ9NT99 713 aa15.31■□□□□ 0.04
LINC00563-201ENST00000566370 VPS54Q9P1Q0 977 aa15.31■□□□□ 0.04
LINC00563-201ENST00000566370 SUGT1Q9Y2Z0 365 aa15.31■□□□□ 0.04
LINC00563-201ENST00000566370 CNTNAP5Q8WYK1 1306 aa15.31■□□□□ 0.04
LINC00563-201ENST00000566370 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.3■□□□□ 0.04
LINC00563-201ENST00000566370 PTGS1P23219 599 aa15.3■□□□□ 0.04
LINC00563-201ENST00000566370 FAM47AQ5JRC9 791 aa15.3■□□□□ 0.04
LINC00563-201ENST00000566370 TEX11Q8IYF3 940 aa15.3■□□□□ 0.04
LINC00563-201ENST00000566370 CMTR1Q8N1G2 835 aaKnown RBP15.3■□□□□ 0.04
LINC00563-201ENST00000566370 NLGN1Q8N2Q7 840 aa15.3■□□□□ 0.04
LINC00563-201ENST00000566370 KIAA1524Q8TCG1 905 aa15.3■□□□□ 0.04
LINC00563-201ENST00000566370 SH3RF3Q8TEJ3 882 aaPredicted RBP15.3■□□□□ 0.04
LINC00563-201ENST00000566370 CCDC12Q8WUD4 166 aaPredicted RBP15.3■□□□□ 0.04
LINC00563-201ENST00000566370 ZNF830Q96NB3 372 aaPredicted RBP15.3■□□□□ 0.04
LINC00563-201ENST00000566370 FBXO2Q9UK22 296 aaPredicted RBP15.3■□□□□ 0.04
LINC00563-201ENST00000566370 LRRC37AA6NMS7 1700 aa15.3■□□□□ 0.04
LINC00563-201ENST00000566370 C6orf229H3BNL8 230 aa15.29■□□□□ 0.04
LINC00563-201ENST00000566370 PPEF1O14829 653 aaPredicted RBP15.29■□□□□ 0.04
LINC00563-201ENST00000566370 PLEKHA8P1O95397 391 aa15.29■□□□□ 0.04
LINC00563-201ENST00000566370 USP17L8P0C7I0 530 aa15.29■□□□□ 0.04
LINC00563-201ENST00000566370 BTDP43251 543 aa15.29■□□□□ 0.04
LINC00563-201ENST00000566370 MYL5Q02045 173 aa15.29■□□□□ 0.04
LINC00563-201ENST00000566370 FUT2Q10981 343 aa15.29■□□□□ 0.04
LINC00563-201ENST00000566370 PKN1Q16512 942 aa15.29■□□□□ 0.04
LINC00563-201ENST00000566370 PFKFB3Q16875 520 aaPredicted RBP15.29■□□□□ 0.04
LINC00563-201ENST00000566370 DPCR1Q3MIW9 517 aa15.29■□□□□ 0.04
LINC00563-201ENST00000566370 CT47A1Q5JQC4 288 aaPredicted RBP15.29■□□□□ 0.04
LINC00563-201ENST00000566370 AMIGO3Q86WK7 504 aa15.29■□□□□ 0.04
LINC00563-201ENST00000566370 SP8Q8IXZ3 490 aa15.29■□□□□ 0.04
LINC00563-201ENST00000566370 CCDC150Q8NCX0 1101 aa15.29■□□□□ 0.04
LINC00563-201ENST00000566370 PNMA1Q8ND90 353 aa15.29■□□□□ 0.04
LINC00563-201ENST00000566370 SMARCE1Q969G3 411 aa15.29■□□□□ 0.04
LINC00563-201ENST00000566370 FBXW7Q969H0 707 aa15.29■□□□□ 0.04
LINC00563-201ENST00000566370 GPR75-ASB3A0A0A6YYF3 556 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 G3V3G9 751 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 BIN1O00499 593 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 CYP2D6P10635 497 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 ATP2B1P20020 1258 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 ALDH1B1P30837 517 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 TXLNAP40222 546 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 NR5A1Q13285 461 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 GRM4Q14833 912 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 POSTNQ15063 836 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 TTC38Q5R3I4 469 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 DCAF8Q5TAQ9 597 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 MPNDQ8N594 471 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 TGFBRAP1Q8WUH2 860 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 FAM163AQ96GL9 167 aaPredicted RBP15.28■□□□□ 0.04
LINC00563-201ENST00000566370 CLIC6Q96NY7 704 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 COA1Q9GZY4 146 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 JAG2Q9Y219 1238 aa15.28■□□□□ 0.04
LINC00563-201ENST00000566370 FAM205AQ6ZU69 1335 aa15.27■□□□□ 0.04
LINC00563-201ENST00000566370 KLRG2A4D1S0 409 aaPredicted RBP15.27■□□□□ 0.04
LINC00563-201ENST00000566370 NPM3O75607 178 aaKnown RBP15.27■□□□□ 0.04
LINC00563-201ENST00000566370 PDE6BP35913 854 aa15.27■□□□□ 0.04
LINC00563-201ENST00000566370 TOB1P50616 345 aaPredicted RBP15.27■□□□□ 0.04
LINC00563-201ENST00000566370 PPP4R3BQ5MIZ7 849 aa15.27■□□□□ 0.04
LINC00563-201ENST00000566370 MFSD14BQ5SR56 506 aa15.27■□□□□ 0.04
LINC00563-201ENST00000566370 MLKLQ8NB16 471 aa15.27■□□□□ 0.04
LINC00563-201ENST00000566370 TBC1D16Q8TBP0 767 aa15.27■□□□□ 0.04
LINC00563-201ENST00000566370 RTFDC1Q9BY42 306 aaPredicted RBP15.27■□□□□ 0.04
LINC00563-201ENST00000566370 MKRN1Q9UHC7 482 aaKnown RBP15.27■□□□□ 0.04
LINC00563-201ENST00000566370 PCDHB6Q9Y5E3 794 aa15.27■□□□□ 0.04
LINC00563-201ENST00000566370 POLRMTO00411 1230 aaKnown RBP15.26■□□□□ 0.03
LINC00563-201ENST00000566370 TRIM37O94972 964 aa15.26■□□□□ 0.03
LINC00563-201ENST00000566370 NPR1P16066 1061 aa15.26■□□□□ 0.03
LINC00563-201ENST00000566370 DIXDC1Q155Q3 683 aa15.26■□□□□ 0.03
LINC00563-201ENST00000566370 TXNRD1Q16881 649 aa15.26■□□□□ 0.03
LINC00563-201ENST00000566370 SRBD1Q8N5C6 995 aaKnown RBP15.26■□□□□ 0.03
LINC00563-201ENST00000566370 EYA3Q99504 573 aa15.26■□□□□ 0.03
LINC00563-201ENST00000566370 POLR2DO15514 142 aaKnown RBP15.26■□□□□ 0.03
LINC00563-201ENST00000566370 PNOCQ13519 176 aa15.26■□□□□ 0.03
LINC00563-201ENST00000566370 LONRF3Q496Y0 759 aa15.26■□□□□ 0.03
LINC00563-201ENST00000566370 C16orf86Q6ZW13 317 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms