RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 IL17RBQ9NRM6 502 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 AFG3L2Q9Y4W6 797 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 ZSWIM8A7E2V4 1837 aa9.67□□□□□ -0.86
CDH13-208ENST00000566333 HTTP42858 3142 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 WDR33Q9C0J8 1336 aaKnown RBP9.66□□□□□ -0.86
CDH13-208ENST00000566333 A0A1W2PRG0 241 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 USP17L5A8MUK1 530 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 AOC2O75106 756 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 KDM4AO75164 1064 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 ECE1P42892 770 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 ICA1Q05084 483 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 MKRN3Q13064 507 aaKnown RBP9.66□□□□□ -0.86
CDH13-208ENST00000566333 RAB3GAP1Q15042 981 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 ADCK5Q3MIX3 580 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 TSGA10IPQ3SY00 556 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 RRP12Q5JTH9 1297 aaKnown RBP9.66□□□□□ -0.86
CDH13-208ENST00000566333 RCSD1Q6JBY9 416 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 CYB5R4Q7L1T6 521 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 DNAJC5GQ8N7S2 189 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 ZNF280CQ8ND82 737 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 ACER1Q8TDN7 264 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 SLC10A4Q96EP9 437 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 IL17RAQ96F46 866 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.66□□□□□ -0.86
CDH13-208ENST00000566333 SNX14Q9Y5W7 946 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 ZHX2Q9Y6X8 837 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 MGAMO43451 1857 aa9.66□□□□□ -0.86
CDH13-208ENST00000566333 SMCHD1A6NHR9 2005 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 A0A0G2JLL6 359 aaPredicted RBP9.65□□□□□ -0.86
CDH13-208ENST00000566333 TRIM75PA6NK02 468 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 TSPY2A6NKD2 308 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 RANBP6O60518 1105 aaKnown RBP9.65□□□□□ -0.86
CDH13-208ENST00000566333 TSPY3P0CV98 308 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 TSPY8P0CW00 308 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 NT5C2P49902 561 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 TFAP4Q01664 338 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 NOGQ13253 232 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 MTMR2Q13614 643 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 KIAA1755Q5JYT7 1200 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 PAXIP1Q6ZW49 1069 aaPredicted RBP9.65□□□□□ -0.86
CDH13-208ENST00000566333 RASGRP2Q7LDG7 609 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 PRRT2Q7Z6L0 340 aaPredicted RBP9.65□□□□□ -0.86
CDH13-208ENST00000566333 ZNF444Q8N0Y2 327 aaPredicted RBP9.65□□□□□ -0.86
CDH13-208ENST00000566333 BRI3BPQ8WY22 251 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 ESR2Q92731 530 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 CCDC102AQ96A19 550 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 TBC1D2Q9BYX2 928 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 CNNM2Q9H8M5 875 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 CABP5Q9NP86 173 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 TOMM22Q9NS69 142 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 MTMR4Q9NYA4 1195 aa9.65□□□□□ -0.86
CDH13-208ENST00000566333 BAZ2BQ9UIF8 2168 aaKnown RBP9.65□□□□□ -0.86
CDH13-208ENST00000566333 RBBP6Q7Z6E9 1792 aaKnown RBP9.65□□□□□ -0.87
CDH13-208ENST00000566333 TNKSO95271 1327 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 TESPA1A2RU30 521 aaPredicted RBP9.64□□□□□ -0.87
CDH13-208ENST00000566333 CXCL11O14625 94 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 EEF2P13639 858 aaKnown RBP9.64□□□□□ -0.87
CDH13-208ENST00000566333 HMGCS2P54868 508 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 BACE1P56817 501 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 SPP2Q13103 211 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 GRM1Q13255 1194 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 SNAPC2Q13487 334 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 SEC23AQ15436 765 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 SH3D19Q5HYK7 790 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 RNF20Q5VTR2 975 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 LRRC47Q8N1G4 583 aaKnown RBP9.64□□□□□ -0.87
CDH13-208ENST00000566333 ENAHQ8N8S7 591 aaPredicted RBP9.64□□□□□ -0.87
CDH13-208ENST00000566333 NCOA7Q8NI08 942 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 C12orf42Q96LP6 360 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 ZKSCAN3Q9BRR0 538 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 BACH2Q9BYV9 841 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 KRT23Q9C075 422 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 KIAA1683Q9H0B3 1180 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 KANSL2Q9H9L4 492 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 AS3MTQ9HBK9 375 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 TCP11L1Q9NUJ3 509 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 ZSWIM5Q9P217 1185 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 NYAP2Q9P242 653 aa9.64□□□□□ -0.87
CDH13-208ENST00000566333 CCL15-CCL14A0A0B4J2E2 113 aa9.63□□□□□ -0.87
CDH13-208ENST00000566333 USP17L10C9JJH3 530 aa9.63□□□□□ -0.87
CDH13-208ENST00000566333 IGF2BP3O00425 579 aaKnown RBP eCLIP9.63□□□□□ -0.87
CDH13-208ENST00000566333 TTLL1O95922 423 aa9.63□□□□□ -0.87
CDH13-208ENST00000566333 GTF2A2P52657 109 aa9.63□□□□□ -0.87
CDH13-208ENST00000566333 KIF23Q02241 960 aaPredicted RBP9.63□□□□□ -0.87
CDH13-208ENST00000566333 CCL15Q16663 113 aa9.63□□□□□ -0.87
CDH13-208ENST00000566333 GPAT2Q6NUI2 795 aa9.63□□□□□ -0.87
CDH13-208ENST00000566333 RALYLQ86SE5 291 aaKnown RBP9.63□□□□□ -0.87
CDH13-208ENST00000566333 FEZ1Q99689 392 aa9.63□□□□□ -0.87
CDH13-208ENST00000566333 PTPN18Q99952 460 aa9.63□□□□□ -0.87
CDH13-208ENST00000566333 SENP2Q9HC62 589 aa9.63□□□□□ -0.87
CDH13-208ENST00000566333 ARHGEF10LQ9HCE6 1279 aa9.63□□□□□ -0.87
CDH13-208ENST00000566333 EMILIN3Q9NT22 766 aa9.63□□□□□ -0.87
CDH13-208ENST00000566333 SYNPO2Q9UMS6 1093 aa9.63□□□□□ -0.87
CDH13-208ENST00000566333 TMX2Q9Y320 296 aa9.63□□□□□ -0.87
CDH13-208ENST00000566333 DOCK3Q8IZD9 2030 aa9.63□□□□□ -0.87
CDH13-208ENST00000566333 WDR19Q8NEZ3 1342 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 ADGRA2Q96PE1 1338 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 PLXNB2O15031 1838 aa9.62□□□□□ -0.87
CDH13-208ENST00000566333 MANSC4A6NHS7 340 aaPredicted RBP9.62□□□□□ -0.87
CDH13-208ENST00000566333 BTBD19C9JJ37 291 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms