RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 TTBK2Q6IQ55 1244 aa4.71□□□□□ -1.66
SMG1-212ENST00000566328 CDH24Q86UP0 819 aa4.71□□□□□ -1.66
SMG1-212ENST00000566328 CREG2Q8IUH2 290 aa4.71□□□□□ -1.66
SMG1-212ENST00000566328 LILRA2Q8N149 483 aa4.71□□□□□ -1.66
SMG1-212ENST00000566328 OXR1Q8N573 874 aa4.71□□□□□ -1.66
SMG1-212ENST00000566328 XAGE3Q8WTP9 111 aa4.71□□□□□ -1.66
SMG1-212ENST00000566328 C12orf49Q9H741 205 aa4.71□□□□□ -1.66
SMG1-212ENST00000566328 GPATCH2Q9NW75 528 aa4.71□□□□□ -1.66
SMG1-212ENST00000566328 TTF2Q9UNY4 1162 aaKnown RBP4.71□□□□□ -1.66
SMG1-212ENST00000566328 USP17L7P0C7H9 530 aa4.7□□□□□ -1.66
SMG1-212ENST00000566328 TPP2P29144 1249 aaPredicted RBP4.7□□□□□ -1.66
SMG1-212ENST00000566328 BUD31P41223 144 aaPredicted RBP4.7□□□□□ -1.66
SMG1-212ENST00000566328 FMR1Q06787 632 aaKnown RBP eCLIP4.7□□□□□ -1.66
SMG1-212ENST00000566328 PDE4BQ07343 736 aa4.7□□□□□ -1.66
SMG1-212ENST00000566328 SLC6A19Q695T7 634 aa4.7□□□□□ -1.66
SMG1-212ENST00000566328 MRPL41Q8IXM3 137 aaKnown RBP4.7□□□□□ -1.66
SMG1-212ENST00000566328 PDZD8Q8NEN9 1154 aa4.7□□□□□ -1.66
SMG1-212ENST00000566328 DHX38Q92620 1227 aaKnown RBP4.7□□□□□ -1.66
SMG1-212ENST00000566328 GAL3ST3Q96A11 431 aa4.7□□□□□ -1.66
SMG1-212ENST00000566328 SLC6A17Q9H1V8 727 aa4.7□□□□□ -1.66
SMG1-212ENST00000566328 ADAMTS10Q9H324 1103 aa4.7□□□□□ -1.66
SMG1-212ENST00000566328 PGRP06401 933 aa4.69□□□□□ -1.66
SMG1-212ENST00000566328 ERVFC1P60507 584 aa4.69□□□□□ -1.66
SMG1-212ENST00000566328 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.69□□□□□ -1.66
SMG1-212ENST00000566328 IRF2BP1Q8IU81 584 aa4.69□□□□□ -1.66
SMG1-212ENST00000566328 IRF2BPLQ9H1B7 796 aa4.69□□□□□ -1.66
SMG1-212ENST00000566328 KCNK12Q9HB15 430 aa4.69□□□□□ -1.66
SMG1-212ENST00000566328 KCNH3Q9ULD8 1083 aa4.69□□□□□ -1.66
SMG1-212ENST00000566328 FITM1A5D6W6 292 aa4.68□□□□□ -1.66
SMG1-212ENST00000566328 GFRA2O00451 464 aa4.68□□□□□ -1.66
SMG1-212ENST00000566328 PEX10O60683 326 aa4.68□□□□□ -1.66
SMG1-212ENST00000566328 BRD1O95696 1058 aa4.68□□□□□ -1.66
SMG1-212ENST00000566328 CCDC85BQ15834 202 aaPredicted RBP4.68□□□□□ -1.66
SMG1-212ENST00000566328 C14orf37Q86TY3 774 aa4.68□□□□□ -1.66
SMG1-212ENST00000566328 SPPL2CQ8IUH8 684 aa4.68□□□□□ -1.66
SMG1-212ENST00000566328 MCATQ8IVS2 390 aaKnown RBP4.68□□□□□ -1.66
SMG1-212ENST00000566328 TMEM87BQ96K49 555 aa4.68□□□□□ -1.66
SMG1-212ENST00000566328 RNF32Q9H0A6 362 aa4.68□□□□□ -1.66
SMG1-212ENST00000566328 DUSP15Q9H1R2 295 aaPredicted RBP4.68□□□□□ -1.66
SMG1-212ENST00000566328 CWC22Q9HCG8 908 aaKnown RBP4.68□□□□□ -1.66
SMG1-212ENST00000566328 DUSP13Q9UII6 198 aa4.68□□□□□ -1.66
SMG1-212ENST00000566328 SEMA7AO75326 666 aa4.67□□□□□ -1.66
SMG1-212ENST00000566328 CDK8P49336 464 aa4.67□□□□□ -1.66
SMG1-212ENST00000566328 CHRNEQ04844 493 aa4.67□□□□□ -1.66
SMG1-212ENST00000566328 EGR3Q06889 387 aa4.67□□□□□ -1.66
SMG1-212ENST00000566328 SNX17Q15036 470 aa4.67□□□□□ -1.66
SMG1-212ENST00000566328 NR0B2Q15466 257 aa4.67□□□□□ -1.66
SMG1-212ENST00000566328 GAB4Q2WGN9 574 aa4.67□□□□□ -1.66
SMG1-212ENST00000566328 TMEM132EQ6IEE7 984 aa4.67□□□□□ -1.66
SMG1-212ENST00000566328 BAHD1Q8TBE0 780 aaPredicted RBP4.67□□□□□ -1.66
SMG1-212ENST00000566328 ASB16Q96NS5 453 aa4.67□□□□□ -1.66
SMG1-212ENST00000566328 DPH2Q9BQC3 489 aaPredicted RBP4.67□□□□□ -1.66
SMG1-212ENST00000566328 GPR62Q9BZJ7 368 aa4.67□□□□□ -1.66
SMG1-212ENST00000566328 MIR1-1HGQ9H1L0 117 aa4.67□□□□□ -1.66
SMG1-212ENST00000566328 PARD6AQ9NPB6 346 aa4.67□□□□□ -1.66
SMG1-212ENST00000566328 TJP2Q9UDY2 1190 aa4.67□□□□□ -1.66
SMG1-212ENST00000566328 ADAM30Q9UKF2 790 aa4.67□□□□□ -1.66
SMG1-212ENST00000566328 WWC3Q9ULE0 1092 aa4.67□□□□□ -1.66
SMG1-212ENST00000566328 CEP131Q9UPN4 1083 aa4.67□□□□□ -1.66
SMG1-212ENST00000566328 ZGLP1P0C6A0 271 aa4.66□□□□□ -1.66
SMG1-212ENST00000566328 RLBP1P12271 317 aa4.66□□□□□ -1.66
SMG1-212ENST00000566328 HOXA5P20719 270 aa4.66□□□□□ -1.66
SMG1-212ENST00000566328 EIF4BP23588 611 aaKnown RBP4.66□□□□□ -1.66
SMG1-212ENST00000566328 LTKP29376 864 aa4.66□□□□□ -1.66
SMG1-212ENST00000566328 TRHRP34981 398 aaPredicted RBP4.66□□□□□ -1.66
SMG1-212ENST00000566328 DLG4P78352 724 aa4.66□□□□□ -1.66
SMG1-212ENST00000566328 TSNAXIP1Q2TAA8 658 aa4.66□□□□□ -1.66
SMG1-212ENST00000566328 ZNF385BQ569K4 471 aa4.66□□□□□ -1.66
SMG1-212ENST00000566328 TSPYL5Q86VY4 417 aaPredicted RBP4.66□□□□□ -1.66
SMG1-212ENST00000566328 RELTQ969Z4 430 aa4.66□□□□□ -1.66
SMG1-212ENST00000566328 SETDB2Q96T68 719 aa4.66□□□□□ -1.66
SMG1-212ENST00000566328 RFXAPO00287 272 aa4.65□□□□□ -1.67
SMG1-212ENST00000566328 DUSP4Q13115 394 aa4.65□□□□□ -1.67
SMG1-212ENST00000566328 SEPT6Q14141 434 aa4.65□□□□□ -1.67
SMG1-212ENST00000566328 TCERG1LQ5VWI1 586 aa4.65□□□□□ -1.67
SMG1-212ENST00000566328 AGMOQ6ZNB7 445 aa4.65□□□□□ -1.67
SMG1-212ENST00000566328 ZNF605Q86T29 641 aa4.65□□□□□ -1.67
SMG1-212ENST00000566328 TMEM151BQ8IW70 566 aa4.65□□□□□ -1.67
SMG1-212ENST00000566328 DNAJB8Q8NHS0 232 aa4.65□□□□□ -1.67
SMG1-212ENST00000566328 Q96M66 194 aa4.65□□□□□ -1.67
SMG1-212ENST00000566328 ZCCHC4Q9H5U6 513 aa4.65□□□□□ -1.67
SMG1-212ENST00000566328 C19orf44Q9H6X5 657 aa4.65□□□□□ -1.67
SMG1-212ENST00000566328 CNOT6Q9ULM6 557 aaKnown RBP4.65□□□□□ -1.67
SMG1-212ENST00000566328 YBX2Q9Y2T7 364 aaKnown RBP4.65□□□□□ -1.67
SMG1-212ENST00000566328 TEX51A0A1B0GUA7 166 aa4.64□□□□□ -1.67
SMG1-212ENST00000566328 LDHBP07195 334 aaKnown RBP4.64□□□□□ -1.67
SMG1-212ENST00000566328 BMP7P18075 431 aa4.64□□□□□ -1.67
SMG1-212ENST00000566328 GNA15P30679 374 aa4.64□□□□□ -1.67
SMG1-212ENST00000566328 PDE6BP35913 854 aa4.64□□□□□ -1.67
SMG1-212ENST00000566328 YARSP54577 528 aaKnown RBP4.64□□□□□ -1.67
SMG1-212ENST00000566328 RPL6Q02878 288 aaKnown RBP4.64□□□□□ -1.67
SMG1-212ENST00000566328 DTWD2Q8NBA8 298 aa4.64□□□□□ -1.67
SMG1-212ENST00000566328 CYB5D2Q8WUJ1 264 aa4.64□□□□□ -1.67
SMG1-212ENST00000566328 INTS4Q96HW7 963 aaKnown RBP4.64□□□□□ -1.67
SMG1-212ENST00000566328 ARID3AQ99856 593 aa4.64□□□□□ -1.67
SMG1-212ENST00000566328 MCOLN1Q9GZU1 580 aa4.64□□□□□ -1.67
SMG1-212ENST00000566328 ZNF552Q9H707 407 aaPredicted RBP4.64□□□□□ -1.67
SMG1-212ENST00000566328 PCDHB5Q9Y5E4 795 aa4.64□□□□□ -1.67
SMG1-212ENST00000566328 WASH4PA8MWX3 477 aa4.63□□□□□ -1.67
SMG1-212ENST00000566328 LIG3P49916 1009 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms