RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 USP17L22D6RA61 530 aa20.07■□□□□ 0.8
TSR3-202ENST00000566296 USP17L17D6RBQ6 530 aa20.07■□□□□ 0.8
TSR3-202ENST00000566296 USP17L19D6RCP7 530 aa20.07■□□□□ 0.8
TSR3-202ENST00000566296 USP17L20D6RJB6 530 aa20.07■□□□□ 0.8
TSR3-202ENST00000566296 USP17L24Q0WX57 530 aa20.07■□□□□ 0.8
TSR3-202ENST00000566296 TTF1Q15361 905 aaPredicted RBP20.07■□□□□ 0.8
TSR3-202ENST00000566296 CERKLQ49MI3 558 aaPredicted RBP20.07■□□□□ 0.8
TSR3-202ENST00000566296 PLEKHH3Q7Z736 793 aa20.07■□□□□ 0.8
TSR3-202ENST00000566296 APBA2Q99767 749 aa20.07■□□□□ 0.8
TSR3-202ENST00000566296 PORCNQ9H237 461 aa20.07■□□□□ 0.8
TSR3-202ENST00000566296 ANTXR1Q9H6X2 564 aa20.07■□□□□ 0.8
TSR3-202ENST00000566296 OGDHLQ9ULD0 1010 aa20.07■□□□□ 0.8
TSR3-202ENST00000566296 GLRX3O76003 335 aaKnown RBP20.06■□□□□ 0.8
TSR3-202ENST00000566296 ABCB5Q2M3G0 1257 aa20.06■□□□□ 0.8
TSR3-202ENST00000566296 RABGAP1Q9Y3P9 1069 aa20.06■□□□□ 0.8
TSR3-202ENST00000566296 POLR3DP05423 398 aaPredicted RBP20.05■□□□□ 0.8
TSR3-202ENST00000566296 Q3C1V9 767 aa20.05■□□□□ 0.8
TSR3-202ENST00000566296 KIAA1683Q9H0B3 1180 aa20.05■□□□□ 0.8
TSR3-202ENST00000566296 IL1RAPL2Q9NP60 686 aa20.05■□□□□ 0.8
TSR3-202ENST00000566296 STAP2Q9UGK3 403 aa20.05■□□□□ 0.8
TSR3-202ENST00000566296 ZMYND8Q9ULU4 1186 aaPredicted RBP20.05■□□□□ 0.8
TSR3-202ENST00000566296 MAGEB6P1A0A0J9YX57 407 aa20.04■□□□□ 0.8
TSR3-202ENST00000566296 VCAM1P19320 739 aa20.04■□□□□ 0.8
TSR3-202ENST00000566296 MORN1Q5T089 497 aa20.04■□□□□ 0.8
TSR3-202ENST00000566296 WDR78Q5VTH9 848 aa20.04■□□□□ 0.8
TSR3-202ENST00000566296 PANK1Q8TE04 598 aa20.04■□□□□ 0.8
TSR3-202ENST00000566296 USP6NLQ92738 828 aa20.04■□□□□ 0.8
TSR3-202ENST00000566296 RIOK1Q9BRS2 568 aaKnown RBP20.04■□□□□ 0.8
TSR3-202ENST00000566296 CRNKL1Q9BZJ0 848 aaKnown RBP20.04■□□□□ 0.8
TSR3-202ENST00000566296 MS4A1P11836 297 aa20.03■□□□□ 0.8
TSR3-202ENST00000566296 CACNB2Q08289 660 aaPredicted RBP20.03■□□□□ 0.8
TSR3-202ENST00000566296 MAP2K5Q13163 448 aa20.03■□□□□ 0.8
TSR3-202ENST00000566296 CLASRPQ8N2M8 674 aaKnown RBP20.03■□□□□ 0.8
TSR3-202ENST00000566296 RHPN1Q8TCX5 695 aa20.03■□□□□ 0.8
TSR3-202ENST00000566296 SZT2Q5T011 3432 aa20.03■□□□□ 0.8
TSR3-202ENST00000566296 MYH8P13535 1937 aa20.02■□□□□ 0.8
TSR3-202ENST00000566296 HMMRO75330 724 aa20.02■□□□□ 0.8
TSR3-202ENST00000566296 PDE6AP16499 860 aa20.02■□□□□ 0.8
TSR3-202ENST00000566296 SHMT1P34896 483 aa20.02■□□□□ 0.8
TSR3-202ENST00000566296 MNX1P50219 401 aaPredicted RBP20.02■□□□□ 0.8
TSR3-202ENST00000566296 CCL14Q16627 93 aa20.02■□□□□ 0.8
TSR3-202ENST00000566296 SLC9C2Q5TAH2 1124 aa20.02■□□□□ 0.8
TSR3-202ENST00000566296 CATSPERGQ6ZRH7 1159 aa20.02■□□□□ 0.8
TSR3-202ENST00000566296 ACER1Q8TDN7 264 aa20.02■□□□□ 0.8
TSR3-202ENST00000566296 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.02■□□□□ 0.8
TSR3-202ENST00000566296 KIF1BPQ96EK5 621 aa20.02■□□□□ 0.8
TSR3-202ENST00000566296 DNAJC2Q99543 621 aaKnown RBP20.02■□□□□ 0.8
TSR3-202ENST00000566296 IVNS1ABPQ9Y6Y0 642 aa20.02■□□□□ 0.8
TSR3-202ENST00000566296 FRMPD3Q5JV73 1810 aa20.02■□□□□ 0.79
TSR3-202ENST00000566296 CNMDO75829 334 aa20.01■□□□□ 0.79
TSR3-202ENST00000566296 CCND3P30281 292 aaPredicted RBP20.01■□□□□ 0.79
TSR3-202ENST00000566296 PLCD1P51178 756 aa20.01■□□□□ 0.79
TSR3-202ENST00000566296 MFSD14CQ5VZR4 134 aa20.01■□□□□ 0.79
TSR3-202ENST00000566296 GDF15Q99988 308 aa20.01■□□□□ 0.79
TSR3-202ENST00000566296 RPAP3Q9H6T3 665 aaPredicted RBP20.01■□□□□ 0.79
TSR3-202ENST00000566296 MCM9Q9NXL9 1143 aa20.01■□□□□ 0.79
TSR3-202ENST00000566296 SLC15A5A6NIM6 579 aa20■□□□□ 0.79
TSR3-202ENST00000566296 APBB1O00213 710 aa20■□□□□ 0.79
TSR3-202ENST00000566296 MPHOSPH10O00566 681 aaKnown RBP20■□□□□ 0.79
TSR3-202ENST00000566296 IFIT2P09913 472 aaKnown RBP20■□□□□ 0.79
TSR3-202ENST00000566296 BMP8BP34820 402 aa20■□□□□ 0.79
TSR3-202ENST00000566296 POTEEQ6S8J3 1075 aa20■□□□□ 0.79
TSR3-202ENST00000566296 LBX2Q6XYB7 198 aa20■□□□□ 0.79
TSR3-202ENST00000566296 EDC3Q96F86 508 aaKnown RBP20■□□□□ 0.79
TSR3-202ENST00000566296 PFASO15067 1338 aa20■□□□□ 0.79
TSR3-202ENST00000566296 ZNF532Q9HCE3 1301 aa20■□□□□ 0.79
TSR3-202ENST00000566296 SPDYE16A6NNV3 312 aaPredicted RBP19.99■□□□□ 0.79
TSR3-202ENST00000566296 GOLIM4O00461 696 aa19.99■□□□□ 0.79
TSR3-202ENST00000566296 SYN1P17600 705 aa19.99■□□□□ 0.79
TSR3-202ENST00000566296 PTPREP23469 700 aa19.99■□□□□ 0.79
TSR3-202ENST00000566296 GABPAQ06546 454 aa19.99■□□□□ 0.79
TSR3-202ENST00000566296 SEPT2Q15019 361 aa19.99■□□□□ 0.79
TSR3-202ENST00000566296 SOX1O00570 391 aaPredicted RBP19.98■□□□□ 0.79
TSR3-202ENST00000566296 RPAP2Q8IXW5 612 aaPredicted RBP19.98■□□□□ 0.79
TSR3-202ENST00000566296 SDR42E1Q8WUS8 393 aa19.98■□□□□ 0.79
TSR3-202ENST00000566296 LRCH3Q96II8 777 aa19.98■□□□□ 0.79
TSR3-202ENST00000566296 BCL11AQ9H165 835 aa19.98■□□□□ 0.79
TSR3-202ENST00000566296 DDX19BQ9UMR2 479 aa19.98■□□□□ 0.79
TSR3-202ENST00000566296 MSCO60682 206 aa19.97■□□□□ 0.79
TSR3-202ENST00000566296 COL6A1P12109 1028 aa19.97■□□□□ 0.79
TSR3-202ENST00000566296 GUCY1A2P33402 732 aa19.97■□□□□ 0.79
TSR3-202ENST00000566296 MAGEA10P43363 369 aaPredicted RBP19.97■□□□□ 0.79
TSR3-202ENST00000566296 GRB14Q14449 540 aa19.97■□□□□ 0.79
TSR3-202ENST00000566296 LCORLQ8N3X6 602 aa19.97■□□□□ 0.79
TSR3-202ENST00000566296 TANGO6Q9C0B7 1094 aa19.97■□□□□ 0.79
TSR3-202ENST00000566296 DCP1AQ9NPI6 582 aaPredicted RBP19.97■□□□□ 0.79
TSR3-202ENST00000566296 BTBD7Q9P203 1132 aa19.97■□□□□ 0.79
TSR3-202ENST00000566296 SWAP70Q9UH65 585 aa19.97■□□□□ 0.79
TSR3-202ENST00000566296 RAB11FIP3O75154 756 aa19.96■□□□□ 0.79
TSR3-202ENST00000566296 ATP2B2Q01814 1243 aa19.96■□□□□ 0.79
TSR3-202ENST00000566296 LHX8Q68G74 356 aa19.96■□□□□ 0.79
TSR3-202ENST00000566296 TMEM179Q6ZVK1 233 aa19.96■□□□□ 0.79
TSR3-202ENST00000566296 ZNF236Q9UL36 1845 aa19.96■□□□□ 0.79
TSR3-202ENST00000566296 A0A0G2JMZ2 1700 aa19.96■□□□□ 0.79
TSR3-202ENST00000566296 LAMA3Q16787 3333 aa19.96■□□□□ 0.79
TSR3-202ENST00000566296 HOXC6P09630 235 aa19.95■□□□□ 0.78
TSR3-202ENST00000566296 AMOTL1Q8IY63 956 aa19.95■□□□□ 0.78
TSR3-202ENST00000566296 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.95■□□□□ 0.78
TSR3-202ENST00000566296 CHMP4BQ9H444 224 aaKnown RBP19.95■□□□□ 0.78
TSR3-202ENST00000566296 SH2D4AQ9H788 454 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms