RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 NCLP19338 710 aaKnown RBP19.58■□□□□ 0.72
RAB40C-210ENST00000566290 UBE2HP62256 183 aa19.58■□□□□ 0.72
RAB40C-210ENST00000566290 RESTQ13127 1097 aa19.58■□□□□ 0.72
RAB40C-210ENST00000566290 TMEM67Q5HYA8 995 aa19.58■□□□□ 0.72
RAB40C-210ENST00000566290 PRAMEF18Q5VWM3 479 aa19.58■□□□□ 0.72
RAB40C-210ENST00000566290 SYAP1Q96A49 352 aaPredicted RBP19.58■□□□□ 0.72
RAB40C-210ENST00000566290 CDK5RAP2Q96SN8 1893 aa19.58■□□□□ 0.72
RAB40C-210ENST00000566290 BAZ2AQ9UIF9 1905 aaKnown RBP19.57■□□□□ 0.72
RAB40C-210ENST00000566290 MYH2Q9UKX2 1941 aa19.57■□□□□ 0.72
RAB40C-210ENST00000566290 GPR25O00155 361 aa19.57■□□□□ 0.72
RAB40C-210ENST00000566290 DYNLL1P63167 89 aaKnown RBP19.57■□□□□ 0.72
RAB40C-210ENST00000566290 CTDSPL2Q05D32 466 aa19.57■□□□□ 0.72
RAB40C-210ENST00000566290 CFAP100Q494V2 611 aa19.57■□□□□ 0.72
RAB40C-210ENST00000566290 CTR9Q6PD62 1173 aa19.57■□□□□ 0.72
RAB40C-210ENST00000566290 CHST3Q7LGC8 479 aa19.57■□□□□ 0.72
RAB40C-210ENST00000566290 SULF1Q8IWU6 871 aa19.57■□□□□ 0.72
RAB40C-210ENST00000566290 GPT2Q8TD30 523 aa19.57■□□□□ 0.72
RAB40C-210ENST00000566290 SDR42E1Q8WUS8 393 aa19.57■□□□□ 0.72
RAB40C-210ENST00000566290 PRMT6Q96LA8 375 aaPredicted RBP19.57■□□□□ 0.72
RAB40C-210ENST00000566290 NOL10Q9BSC4 688 aaKnown RBP19.57■□□□□ 0.72
RAB40C-210ENST00000566290 TAOK2Q9UL54 1235 aa19.57■□□□□ 0.72
RAB40C-210ENST00000566290 TACC3Q9Y6A5 838 aa19.57■□□□□ 0.72
RAB40C-210ENST00000566290 ECM29Q5VYK3 1845 aa19.56■□□□□ 0.72
RAB40C-210ENST00000566290 GPR75-ASB3A0A0A6YYF3 556 aa19.56■□□□□ 0.72
RAB40C-210ENST00000566290 ERICH2A1L162 156 aa19.56■□□□□ 0.72
RAB40C-210ENST00000566290 POTEFA5A3E0 1075 aa19.56■□□□□ 0.72
RAB40C-210ENST00000566290 ZBTB43O43298 467 aa19.56■□□□□ 0.72
RAB40C-210ENST00000566290 FDPSP14324 419 aaKnown RBP19.56■□□□□ 0.72
RAB40C-210ENST00000566290 METAP2P50579 478 aaKnown RBP eCLIP19.56■□□□□ 0.72
RAB40C-210ENST00000566290 SEC23AQ15436 765 aa19.56■□□□□ 0.72
RAB40C-210ENST00000566290 MOB2Q70IA6 237 aa19.56■□□□□ 0.72
RAB40C-210ENST00000566290 MTMR14Q8NCE2 650 aa19.56■□□□□ 0.72
RAB40C-210ENST00000566290 TTF2Q9UNY4 1162 aaKnown RBP19.56■□□□□ 0.72
RAB40C-210ENST00000566290 PITPNM2Q9BZ72 1349 aa19.55■□□□□ 0.72
RAB40C-210ENST00000566290 TCHHQ07283 1943 aa19.55■□□□□ 0.72
RAB40C-210ENST00000566290 CCDC196A0A1B0GTZ2 297 aa19.55■□□□□ 0.72
RAB40C-210ENST00000566290 GOLGA6L3A6NEY3 463 aa19.55■□□□□ 0.72
RAB40C-210ENST00000566290 CPLX1O14810 134 aa19.55■□□□□ 0.72
RAB40C-210ENST00000566290 IFIT3O14879 490 aaKnown RBP19.55■□□□□ 0.72
RAB40C-210ENST00000566290 DLGAP5Q15398 846 aa19.55■□□□□ 0.72
RAB40C-210ENST00000566290 GPHNQ9NQX3 736 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-210ENST00000566290 SPDYE2BA6NHP3 402 aa19.54■□□□□ 0.72
RAB40C-210ENST00000566290 H3BQV1 296 aa19.54■□□□□ 0.72
RAB40C-210ENST00000566290 SPDYE6P0CI01 402 aa19.54■□□□□ 0.72
RAB40C-210ENST00000566290 IFNAR1P17181 557 aa19.54■□□□□ 0.72
RAB40C-210ENST00000566290 MRE11P49959 708 aa19.54■□□□□ 0.72
RAB40C-210ENST00000566290 MMP14P50281 582 aa19.54■□□□□ 0.72
RAB40C-210ENST00000566290 WTAPQ15007 396 aa19.54■□□□□ 0.72
RAB40C-210ENST00000566290 NTRK3Q16288 839 aa19.54■□□□□ 0.72
RAB40C-210ENST00000566290 CCDC178Q5BJE1 867 aa19.54■□□□□ 0.72
RAB40C-210ENST00000566290 SYNE3Q6ZMZ3 975 aa19.54■□□□□ 0.72
RAB40C-210ENST00000566290 R3HDMLQ9H3Y0 253 aa19.54■□□□□ 0.72
RAB40C-210ENST00000566290 NCOA5Q9HCD5 579 aaKnown RBP19.54■□□□□ 0.72
RAB40C-210ENST00000566290 AATFQ9NY61 560 aaKnown RBP eCLIP19.54■□□□□ 0.72
RAB40C-210ENST00000566290 CNPY2Q9Y2B0 182 aa19.54■□□□□ 0.72
RAB40C-210ENST00000566290 SLC12A7Q9Y666 1083 aa19.54■□□□□ 0.72
RAB40C-210ENST00000566290 CLRN2A0PK11 232 aa19.53■□□□□ 0.72
RAB40C-210ENST00000566290 CCDC69A6NI79 296 aa19.53■□□□□ 0.72
RAB40C-210ENST00000566290 CALM1P0DP23 149 aa19.53■□□□□ 0.72
RAB40C-210ENST00000566290 CALM2P0DP24 149 aa19.53■□□□□ 0.72
RAB40C-210ENST00000566290 CALM3P0DP25 149 aa19.53■□□□□ 0.72
RAB40C-210ENST00000566290 CCT2P78371 535 aaKnown RBP19.53■□□□□ 0.72
RAB40C-210ENST00000566290 PDE4BQ07343 736 aa19.53■□□□□ 0.72
RAB40C-210ENST00000566290 FOXD4L5Q5VV16 416 aaPredicted RBP19.53■□□□□ 0.72
RAB40C-210ENST00000566290 BRAPQ7Z569 592 aa19.53■□□□□ 0.72
RAB40C-210ENST00000566290 IQCA1Q86XH1 822 aa19.53■□□□□ 0.72
RAB40C-210ENST00000566290 FBXO18Q8NFZ0 1043 aa19.53■□□□□ 0.72
RAB40C-210ENST00000566290 FOXD4L4Q8WXT5 416 aaPredicted RBP19.53■□□□□ 0.72
RAB40C-210ENST00000566290 UBAC1Q9BSL1 405 aa19.53■□□□□ 0.72
RAB40C-210ENST00000566290 MRIQ9BWK5 157 aa19.53■□□□□ 0.72
RAB40C-210ENST00000566290 CFAP45Q9UL16 551 aa19.53■□□□□ 0.72
RAB40C-210ENST00000566290 KIAA0100Q14667 2235 aaKnown RBP19.53■□□□□ 0.72
RAB40C-210ENST00000566290 GOLGA8AA7E2F4 631 aa19.52■□□□□ 0.72
RAB40C-210ENST00000566290 USP17L12C9JPN9 530 aa19.52■□□□□ 0.72
RAB40C-210ENST00000566290 USP17L21D6R901 530 aa19.52■□□□□ 0.72
RAB40C-210ENST00000566290 DDAH1O94760 285 aa19.52■□□□□ 0.72
RAB40C-210ENST00000566290 TM4SF4P48230 202 aa19.52■□□□□ 0.72
RAB40C-210ENST00000566290 RBM5P52756 815 aaKnown RBP eCLIP19.52■□□□□ 0.72
RAB40C-210ENST00000566290 DNM1Q05193 864 aaKnown RBP19.52■□□□□ 0.72
RAB40C-210ENST00000566290 C12orf60Q5U649 245 aa19.52■□□□□ 0.72
RAB40C-210ENST00000566290 AMOTL1Q8IY63 956 aa19.52■□□□□ 0.72
RAB40C-210ENST00000566290 WASF1Q92558 559 aa19.52■□□□□ 0.72
RAB40C-210ENST00000566290 ORC3Q9UBD5 711 aaPredicted RBP19.52■□□□□ 0.72
RAB40C-210ENST00000566290 UBE2Q2LH0YL09 131 aa19.51■□□□□ 0.71
RAB40C-210ENST00000566290 LETM1O95202 739 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-210ENST00000566290 CRKP46108 304 aa19.51■□□□□ 0.71
RAB40C-210ENST00000566290 ZSCAN23Q3MJ62 389 aa19.51■□□□□ 0.71
RAB40C-210ENST00000566290 NOM1Q5C9Z4 860 aaKnown RBP19.51■□□□□ 0.71
RAB40C-210ENST00000566290 NKX2-3Q8TAU0 364 aa19.51■□□□□ 0.71
RAB40C-210ENST00000566290 ANKS1AQ92625 1134 aa19.51■□□□□ 0.71
RAB40C-210ENST00000566290 ZSCAN10Q96SZ4 725 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-210ENST00000566290 MAP3K14Q99558 947 aa19.51■□□□□ 0.71
RAB40C-210ENST00000566290 ZNF287Q9HBT7 754 aa19.51■□□□□ 0.71
RAB40C-210ENST00000566290 FAM217BQ9NTX9 383 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-210ENST00000566290 SERPINA10Q9UK55 444 aa19.51■□□□□ 0.71
RAB40C-210ENST00000566290 COLQQ9Y215 455 aaPredicted RBP19.51■□□□□ 0.71
RAB40C-210ENST00000566290 TNKSO95271 1327 aa19.51■□□□□ 0.71
RAB40C-210ENST00000566290 MINDY4BA8MYZ0 360 aa19.5■□□□□ 0.71
RAB40C-210ENST00000566290 FKTNO75072 461 aa19.5■□□□□ 0.71
RAB40C-210ENST00000566290 CAVIN1Q6NZI2 390 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms