RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 SHMT1P34896 483 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 USP17L24Q0WX57 530 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 UBE2Q1Q7Z7E8 422 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 SOCS4Q8WXH5 440 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 NUDT12Q9BQG2 462 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 PAGR1Q9BTK6 254 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 LRRCC1Q9C099 1032 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 KIAA1683Q9H0B3 1180 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.13■□□□□ 0.17
HACD3-208ENST00000566239 BOLA2Q9H3K6 86 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 RBPJLQ9UBG7 517 aa16.13■□□□□ 0.17
HACD3-208ENST00000566239 FRMPD3Q5JV73 1810 aa16.12■□□□□ 0.17
HACD3-208ENST00000566239 TCRBV5S4A2TA0A5A2 114 aa16.12■□□□□ 0.17
HACD3-208ENST00000566239 ERVK-9P63128 1117 aa16.12■□□□□ 0.17
HACD3-208ENST00000566239 ERVK-24P63145 666 aa16.12■□□□□ 0.17
HACD3-208ENST00000566239 LCORLQ8N3X6 602 aa16.12■□□□□ 0.17
HACD3-208ENST00000566239 SDR42E1Q8WUS8 393 aa16.12■□□□□ 0.17
HACD3-208ENST00000566239 CWC22Q9HCG8 908 aaKnown RBP16.12■□□□□ 0.17
HACD3-208ENST00000566239 TXNRD2Q9NNW7 524 aa16.12■□□□□ 0.17
HACD3-208ENST00000566239 HMX1Q9NP08 348 aaPredicted RBP16.12■□□□□ 0.17
HACD3-208ENST00000566239 RPTORQ8N122 1335 aa16.12■□□□□ 0.17
HACD3-208ENST00000566239 PARP14Q460N5 1801 aa16.12■□□□□ 0.17
HACD3-208ENST00000566239 MPHOSPH10O00566 681 aaKnown RBP16.11■□□□□ 0.17
HACD3-208ENST00000566239 CYP2B6P20813 491 aa16.11■□□□□ 0.17
HACD3-208ENST00000566239 ADD2P35612 726 aa16.11■□□□□ 0.17
HACD3-208ENST00000566239 CCNA1P78396 465 aa16.11■□□□□ 0.17
HACD3-208ENST00000566239 GABPAQ06546 454 aa16.11■□□□□ 0.17
HACD3-208ENST00000566239 ZSCAN25Q6NSZ9 544 aa16.11■□□□□ 0.17
HACD3-208ENST00000566239 AMOTL1Q8IY63 956 aa16.11■□□□□ 0.17
HACD3-208ENST00000566239 TRMT44Q8IYL2 757 aaKnown RBP16.11■□□□□ 0.17
HACD3-208ENST00000566239 EDC3Q96F86 508 aaKnown RBP16.11■□□□□ 0.17
HACD3-208ENST00000566239 DDRGK1Q96HY6 314 aa16.11■□□□□ 0.17
HACD3-208ENST00000566239 HAUS7Q99871 368 aa16.11■□□□□ 0.17
HACD3-208ENST00000566239 DCP1AQ9NPI6 582 aaPredicted RBP16.11■□□□□ 0.17
HACD3-208ENST00000566239 ATP8A2Q9NTI2 1148 aa16.11■□□□□ 0.17
HACD3-208ENST00000566239 SWAP70Q9UH65 585 aa16.11■□□□□ 0.17
HACD3-208ENST00000566239 COLQQ9Y215 455 aaPredicted RBP16.11■□□□□ 0.17
HACD3-208ENST00000566239 NR2E3Q9Y5X4 410 aa16.11■□□□□ 0.17
HACD3-208ENST00000566239 PEX10O60683 326 aa16.1■□□□□ 0.17
HACD3-208ENST00000566239 GLRX3O76003 335 aaKnown RBP16.1■□□□□ 0.17
HACD3-208ENST00000566239 XRCC5P13010 732 aaKnown RBP16.1■□□□□ 0.17
HACD3-208ENST00000566239 VCAM1P19320 739 aa16.1■□□□□ 0.17
HACD3-208ENST00000566239 SEPT2Q15019 361 aa16.1■□□□□ 0.17
HACD3-208ENST00000566239 CATSPERGQ6ZRH7 1159 aa16.1■□□□□ 0.17
HACD3-208ENST00000566239 ANKLE1Q8NAG6 615 aa16.1■□□□□ 0.17
HACD3-208ENST00000566239 CRISPLD2Q9H0B8 497 aa16.1■□□□□ 0.17
HACD3-208ENST00000566239 ARMT1Q9H993 441 aa16.1■□□□□ 0.17
HACD3-208ENST00000566239 RABGAP1Q9Y3P9 1069 aa16.1■□□□□ 0.17
HACD3-208ENST00000566239 CEP290O15078 2479 aa16.1■□□□□ 0.17
HACD3-208ENST00000566239 RLFQ13129 1914 aa16.09■□□□□ 0.17
HACD3-208ENST00000566239 A0A0G2JMZ2 1700 aa16.09■□□□□ 0.17
HACD3-208ENST00000566239 MBD4O95243 580 aa16.09■□□□□ 0.17
HACD3-208ENST00000566239 RGS2P41220 211 aa16.09■□□□□ 0.17
HACD3-208ENST00000566239 Q3C1V9 767 aa16.09■□□□□ 0.17
HACD3-208ENST00000566239 C20orf194Q5TEA3 1177 aa16.09■□□□□ 0.17
HACD3-208ENST00000566239 GPR142Q7Z601 462 aa16.09■□□□□ 0.17
HACD3-208ENST00000566239 PLEKHH3Q7Z736 793 aa16.09■□□□□ 0.17
HACD3-208ENST00000566239 ACER1Q8TDN7 264 aa16.09■□□□□ 0.17
HACD3-208ENST00000566239 TRIB2Q92519 343 aa16.09■□□□□ 0.17
HACD3-208ENST00000566239 PORCNQ9H237 461 aa16.09■□□□□ 0.17
HACD3-208ENST00000566239 COL11A1P12107 1806 aaPredicted RBP16.09■□□□□ 0.17
HACD3-208ENST00000566239 ZNFX1Q9P2E3 1918 aaKnown RBP16.08■□□□□ 0.16
HACD3-208ENST00000566239 ZKSCAN1P17029 563 aaPredicted RBP16.08■□□□□ 0.16
HACD3-208ENST00000566239 GUCY1A2P33402 732 aa16.08■□□□□ 0.16
HACD3-208ENST00000566239 UBE3CQ15386 1083 aa16.08■□□□□ 0.16
HACD3-208ENST00000566239 TMEM179Q6ZVK1 233 aa16.08■□□□□ 0.16
HACD3-208ENST00000566239 NECAB2Q7Z6G3 386 aa16.08■□□□□ 0.16
HACD3-208ENST00000566239 RPAP3Q9H6T3 665 aaPredicted RBP16.08■□□□□ 0.16
HACD3-208ENST00000566239 ZNF236Q9UL36 1845 aa16.08■□□□□ 0.16
HACD3-208ENST00000566239 EVI5O60447 810 aa16.07■□□□□ 0.16
HACD3-208ENST00000566239 PRKAR2AP13861 404 aaKnown RBP16.07■□□□□ 0.16
HACD3-208ENST00000566239 TRIM32Q13049 653 aa16.07■□□□□ 0.16
HACD3-208ENST00000566239 LBX2Q6XYB7 198 aa16.07■□□□□ 0.16
HACD3-208ENST00000566239 GPATCH3Q96I76 525 aa16.07■□□□□ 0.16
HACD3-208ENST00000566239 PAWRQ96IZ0 340 aaKnown RBP16.07■□□□□ 0.16
HACD3-208ENST00000566239 APBA2Q99767 749 aa16.07■□□□□ 0.16
HACD3-208ENST00000566239 ARHGEF10LQ9HCE6 1279 aa16.07■□□□□ 0.16
HACD3-208ENST00000566239 MYH4Q9Y623 1939 aa16.06■□□□□ 0.16
HACD3-208ENST00000566239 PRKAB2O43741 272 aa16.06■□□□□ 0.16
HACD3-208ENST00000566239 SMARCA5O60264 1052 aaPredicted RBP16.06■□□□□ 0.16
HACD3-208ENST00000566239 CYP2D6P10635 497 aa16.06■□□□□ 0.16
HACD3-208ENST00000566239 EVX2Q03828 476 aa16.06■□□□□ 0.16
HACD3-208ENST00000566239 MAP2K5Q13163 448 aa16.06■□□□□ 0.16
HACD3-208ENST00000566239 MORN1Q5T089 497 aa16.06■□□□□ 0.16
HACD3-208ENST00000566239 WDR78Q5VTH9 848 aa16.06■□□□□ 0.16
HACD3-208ENST00000566239 CHRDL2Q6WN34 429 aa16.06■□□□□ 0.16
HACD3-208ENST00000566239 USP6NLQ92738 828 aa16.06■□□□□ 0.16
HACD3-208ENST00000566239 TANGO6Q9C0B7 1094 aa16.06■□□□□ 0.16
HACD3-208ENST00000566239 SH2D4AQ9H788 454 aa16.06■□□□□ 0.16
HACD3-208ENST00000566239 ECHDC1Q9NTX5 307 aa16.06■□□□□ 0.16
HACD3-208ENST00000566239 SLC4A4Q9Y6R1 1079 aa16.06■□□□□ 0.16
HACD3-208ENST00000566239 IVNS1ABPQ9Y6Y0 642 aa16.06■□□□□ 0.16
HACD3-208ENST00000566239 SPDYE16A6NNV3 312 aaPredicted RBP16.05■□□□□ 0.16
HACD3-208ENST00000566239 CNMDO75829 334 aa16.05■□□□□ 0.16
HACD3-208ENST00000566239 FXR1P51114 621 aaKnown RBP eCLIP16.05■□□□□ 0.16
HACD3-208ENST00000566239 COG2Q14746 738 aa16.05■□□□□ 0.16
HACD3-208ENST00000566239 SLFNL1Q499Z3 407 aa16.05■□□□□ 0.16
HACD3-208ENST00000566239 MAP3K21Q5TCX8 1036 aa16.05■□□□□ 0.16
HACD3-208ENST00000566239 C12orf60Q5U649 245 aa16.05■□□□□ 0.16
HACD3-208ENST00000566239 POTEEQ6S8J3 1075 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms