RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 OSBPP22059 807 aa18.42■□□□□ 0.54
COMMD4-212ENST00000565517 KIF22Q14807 665 aa18.42■□□□□ 0.54
COMMD4-212ENST00000565517 CCDC129Q6ZRS4 1044 aa18.42■□□□□ 0.54
COMMD4-212ENST00000565517 OTOP1Q7RTM1 612 aa18.42■□□□□ 0.54
COMMD4-212ENST00000565517 FAM227BQ96M60 508 aa18.42■□□□□ 0.54
COMMD4-212ENST00000565517 NAPBQ9H115 298 aa18.42■□□□□ 0.54
COMMD4-212ENST00000565517 EFCC1Q9HA90 598 aa18.42■□□□□ 0.54
COMMD4-212ENST00000565517 ZNF287Q9HBT7 754 aa18.42■□□□□ 0.54
COMMD4-212ENST00000565517 CPA4Q9UI42 421 aa18.42■□□□□ 0.54
COMMD4-212ENST00000565517 TRIM17Q9Y577 477 aa18.42■□□□□ 0.54
COMMD4-212ENST00000565517 GREB1LQ9C091 1923 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-212ENST00000565517 FOXP2O15409 715 aa18.41■□□□□ 0.54
COMMD4-212ENST00000565517 GNRH1P01148 92 aa18.41■□□□□ 0.54
COMMD4-212ENST00000565517 AKR1B1P15121 316 aa18.41■□□□□ 0.54
COMMD4-212ENST00000565517 LACTBP83111 547 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-212ENST00000565517 NMIQ13287 307 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-212ENST00000565517 ALX1Q15699 326 aa18.41■□□□□ 0.54
COMMD4-212ENST00000565517 TTC22Q5TAA0 569 aa18.41■□□□□ 0.54
COMMD4-212ENST00000565517 FBXO46Q6PJ61 603 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-212ENST00000565517 ACER1Q8TDN7 264 aa18.41■□□□□ 0.54
COMMD4-212ENST00000565517 SMCR8Q8TEV9 937 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-212ENST00000565517 FEZ1Q99689 392 aa18.41■□□□□ 0.54
COMMD4-212ENST00000565517 MKNK2Q9HBH9 465 aa18.41■□□□□ 0.54
COMMD4-212ENST00000565517 SLC3A2P08195 630 aaKnown RBP18.4■□□□□ 0.54
COMMD4-212ENST00000565517 GCLCP48506 637 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-212ENST00000565517 MFAP1P55081 439 aaKnown RBP18.4■□□□□ 0.54
COMMD4-212ENST00000565517 ASCC2Q9H1I8 757 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-212ENST00000565517 RASA1P20936 1047 aa18.39■□□□□ 0.53
COMMD4-212ENST00000565517 CAP1Q01518 475 aa18.39■□□□□ 0.53
COMMD4-212ENST00000565517 CENPQQ7L2Z9 268 aaPredicted RBP18.39■□□□□ 0.53
COMMD4-212ENST00000565517 KANSL2Q9H9L4 492 aa18.39■□□□□ 0.53
COMMD4-212ENST00000565517 ARHGEF10LQ9HCE6 1279 aa18.39■□□□□ 0.53
COMMD4-212ENST00000565517 CCDC171Q6TFL3 1326 aa18.39■□□□□ 0.53
COMMD4-212ENST00000565517 A0A1W2PRG0 241 aa18.38■□□□□ 0.53
COMMD4-212ENST00000565517 HSPD1P10809 573 aaKnown RBP18.38■□□□□ 0.53
COMMD4-212ENST00000565517 GSPT1P15170 499 aaKnown RBP18.38■□□□□ 0.53
COMMD4-212ENST00000565517 IRX3P78415 501 aaPredicted RBP18.38■□□□□ 0.53
COMMD4-212ENST00000565517 PDE4BQ07343 736 aa18.38■□□□□ 0.53
COMMD4-212ENST00000565517 PPARAQ07869 468 aa18.38■□□□□ 0.53
COMMD4-212ENST00000565517 VPS53Q5VIR6 699 aa18.38■□□□□ 0.53
COMMD4-212ENST00000565517 ZNF589Q86UQ0 364 aaPredicted RBP18.38■□□□□ 0.53
COMMD4-212ENST00000565517 SIAH1Q8IUQ4 282 aa18.38■□□□□ 0.53
COMMD4-212ENST00000565517 SH2D4AQ9H788 454 aa18.38■□□□□ 0.53
COMMD4-212ENST00000565517 DIAPH3Q9NSV4 1193 aa18.38■□□□□ 0.53
COMMD4-212ENST00000565517 ANAPC4Q9UJX5 808 aa18.38■□□□□ 0.53
COMMD4-212ENST00000565517 PTPN22Q9Y2R2 807 aa18.38■□□□□ 0.53
COMMD4-212ENST00000565517 TMX2Q9Y320 296 aa18.38■□□□□ 0.53
COMMD4-212ENST00000565517 ZMYM6O95789 1325 aa18.38■□□□□ 0.53
COMMD4-212ENST00000565517 ZSWIM8A7E2V4 1837 aa18.37■□□□□ 0.53
COMMD4-212ENST00000565517 USP17L15C9J2P7 530 aa18.37■□□□□ 0.53
COMMD4-212ENST00000565517 USP17L13C9JLJ4 530 aa18.37■□□□□ 0.53
COMMD4-212ENST00000565517 USP17L11C9JVI0 530 aa18.37■□□□□ 0.53
COMMD4-212ENST00000565517 USP17L18D6R9N7 530 aa18.37■□□□□ 0.53
COMMD4-212ENST00000565517 USP17L22D6RA61 530 aa18.37■□□□□ 0.53
COMMD4-212ENST00000565517 USP17L17D6RBQ6 530 aa18.37■□□□□ 0.53
COMMD4-212ENST00000565517 USP17L19D6RCP7 530 aa18.37■□□□□ 0.53
COMMD4-212ENST00000565517 USP17L20D6RJB6 530 aa18.37■□□□□ 0.53
COMMD4-212ENST00000565517 PRMT2P55345 433 aa18.37■□□□□ 0.53
COMMD4-212ENST00000565517 ICA1Q05084 483 aa18.37■□□□□ 0.53
COMMD4-212ENST00000565517 USP17L24Q0WX57 530 aa18.37■□□□□ 0.53
COMMD4-212ENST00000565517 ZYXQ15942 572 aaKnown RBP18.37■□□□□ 0.53
COMMD4-212ENST00000565517 FAM110CQ1W6H9 321 aa18.37■□□□□ 0.53
COMMD4-212ENST00000565517 ZNF444Q8N0Y2 327 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-212ENST00000565517 GTF3C2Q8WUA4 911 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-212ENST00000565517 FGAP02671 866 aa18.36■□□□□ 0.53
COMMD4-212ENST00000565517 VCAM1P19320 739 aa18.36■□□□□ 0.53
COMMD4-212ENST00000565517 HOXD10P28358 340 aa18.36■□□□□ 0.53
COMMD4-212ENST00000565517 PSMC4P43686 418 aa18.36■□□□□ 0.53
COMMD4-212ENST00000565517 CWC27Q6UX04 472 aaKnown RBP18.36■□□□□ 0.53
COMMD4-212ENST00000565517 CATSPERGQ6ZRH7 1159 aa18.36■□□□□ 0.53
COMMD4-212ENST00000565517 ANKRD13CQ8N6S4 541 aa18.36■□□□□ 0.53
COMMD4-212ENST00000565517 LPAR1Q92633 364 aa18.36■□□□□ 0.53
COMMD4-212ENST00000565517 P2RX7Q99572 595 aaKnown RBP18.36■□□□□ 0.53
COMMD4-212ENST00000565517 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.36■□□□□ 0.53
COMMD4-212ENST00000565517 ARHGAP39Q9C0H5 1083 aa18.36■□□□□ 0.53
COMMD4-212ENST00000565517 HPS5Q9UPZ3 1129 aa18.36■□□□□ 0.53
COMMD4-212ENST00000565517 MYH4Q9Y623 1939 aa18.36■□□□□ 0.53
COMMD4-212ENST00000565517 DOCK3Q8IZD9 2030 aa18.35■□□□□ 0.53
COMMD4-212ENST00000565517 EEF2P13639 858 aaKnown RBP18.35■□□□□ 0.53
COMMD4-212ENST00000565517 HERVK_113P62684 666 aa18.35■□□□□ 0.53
COMMD4-212ENST00000565517 STK11IPQ8N1F8 1099 aa18.35■□□□□ 0.53
COMMD4-212ENST00000565517 TRIM47Q96LD4 638 aa18.35■□□□□ 0.53
COMMD4-212ENST00000565517 MORF4L1Q9UBU8 362 aa18.35■□□□□ 0.53
COMMD4-212ENST00000565517 IGKV6D-41A0A0C4DH26 115 aa18.34■□□□□ 0.53
COMMD4-212ENST00000565517 FMNL1O95466 1100 aaPredicted RBP18.34■□□□□ 0.53
COMMD4-212ENST00000565517 NEFLP07196 543 aa18.34■□□□□ 0.53
COMMD4-212ENST00000565517 CTGFP29279 349 aa18.34■□□□□ 0.53
COMMD4-212ENST00000565517 FCGRTP55899 365 aa18.34■□□□□ 0.53
COMMD4-212ENST00000565517 VCPKMTQ9H867 229 aa18.34■□□□□ 0.53
COMMD4-212ENST00000565517 NYAP2Q9P242 653 aa18.34■□□□□ 0.53
COMMD4-212ENST00000565517 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.34■□□□□ 0.53
COMMD4-212ENST00000565517 PLIN4Q96Q06 1357 aa18.33■□□□□ 0.53
COMMD4-212ENST00000565517 CCDC85CA6NKD9 419 aa18.33■□□□□ 0.52
COMMD4-212ENST00000565517 PRDM1O75626 825 aa18.33■□□□□ 0.52
COMMD4-212ENST00000565517 FGRP09769 529 aa18.33■□□□□ 0.52
COMMD4-212ENST00000565517 LBX2Q6XYB7 198 aa18.33■□□□□ 0.52
COMMD4-212ENST00000565517 CLEC10AQ8IUN9 316 aa18.33■□□□□ 0.52
COMMD4-212ENST00000565517 NEDD1Q8NHV4 660 aa18.33■□□□□ 0.52
COMMD4-212ENST00000565517 RPAP3Q9H6T3 665 aaPredicted RBP18.33■□□□□ 0.52
COMMD4-212ENST00000565517 SRRDQ9UH36 339 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms