RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 SEPT2Q15019 361 aa18.9■□□□□ 0.62
CDH3-204ENST00000565453 ZYXQ15942 572 aaKnown RBP18.9■□□□□ 0.62
CDH3-204ENST00000565453 Q3C1V9 767 aa18.9■□□□□ 0.62
CDH3-204ENST00000565453 UBE2Q1Q7Z7E8 422 aa18.9■□□□□ 0.62
CDH3-204ENST00000565453 GPRC5AQ8NFJ5 357 aa18.9■□□□□ 0.62
CDH3-204ENST00000565453 NKX2-3Q8TAU0 364 aa18.9■□□□□ 0.62
CDH3-204ENST00000565453 FEZ1Q99689 392 aa18.9■□□□□ 0.62
CDH3-204ENST00000565453 TAOK2Q9UL54 1235 aa18.9■□□□□ 0.62
CDH3-204ENST00000565453 SMIM22K7EJ46 135 aa18.89■□□□□ 0.61
CDH3-204ENST00000565453 GTF3C2Q8WUA4 911 aaPredicted RBP18.89■□□□□ 0.61
CDH3-204ENST00000565453 DYNLL2Q96FJ2 89 aa18.89■□□□□ 0.61
CDH3-204ENST00000565453 PUS7LQ9H0K6 701 aaKnown RBP18.89■□□□□ 0.61
CDH3-204ENST00000565453 SWAP70Q9UH65 585 aa18.89■□□□□ 0.61
CDH3-204ENST00000565453 BAZ2AQ9UIF9 1905 aaKnown RBP18.88■□□□□ 0.61
CDH3-204ENST00000565453 USP17L15C9J2P7 530 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 USP17L13C9JLJ4 530 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 USP17L11C9JVI0 530 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 USP17L18D6R9N7 530 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 USP17L22D6RA61 530 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 USP17L17D6RBQ6 530 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 USP17L19D6RCP7 530 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 USP17L20D6RJB6 530 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 CNMDO75829 334 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 VCAM1P19320 739 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 ERVK-9P63128 1117 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 ERVK-24P63145 666 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 USP17L24Q0WX57 530 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 C12orf60Q5U649 245 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 TSHZ3Q63HK5 1081 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 ZSCAN25Q6NSZ9 544 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 CATSPERGQ6ZRH7 1159 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 KBTBD3Q8NAB2 608 aa18.88■□□□□ 0.61
CDH3-204ENST00000565453 U2AF1L4Q8WU68 220 aaKnown RBP18.88■□□□□ 0.61
CDH3-204ENST00000565453 CYP2D7A0A087X1C5 515 aa18.87■□□□□ 0.61
CDH3-204ENST00000565453 A0A1W2PRG0 241 aa18.87■□□□□ 0.61
CDH3-204ENST00000565453 SGPL1O95470 568 aa18.87■□□□□ 0.61
CDH3-204ENST00000565453 PORCNQ9H237 461 aa18.87■□□□□ 0.61
CDH3-204ENST00000565453 PAK6Q9NQU5 681 aaPredicted RBP18.87■□□□□ 0.61
CDH3-204ENST00000565453 MKI67P46013 3256 aaKnown RBP18.86■□□□□ 0.61
CDH3-204ENST00000565453 USP17L12C9JPN9 530 aa18.86■□□□□ 0.61
CDH3-204ENST00000565453 USP17L21D6R901 530 aa18.86■□□□□ 0.61
CDH3-204ENST00000565453 MPHOSPH10O00566 681 aaKnown RBP18.86■□□□□ 0.61
CDH3-204ENST00000565453 LBX2Q6XYB7 198 aa18.86■□□□□ 0.61
CDH3-204ENST00000565453 TMEM179Q6ZVK1 233 aa18.86■□□□□ 0.61
CDH3-204ENST00000565453 SIAH1Q8IUQ4 282 aa18.86■□□□□ 0.61
CDH3-204ENST00000565453 PAGR1Q9BTK6 254 aa18.86■□□□□ 0.61
CDH3-204ENST00000565453 RABGAP1Q9Y3P9 1069 aa18.86■□□□□ 0.61
CDH3-204ENST00000565453 SLC4A4Q9Y6R1 1079 aa18.86■□□□□ 0.61
CDH3-204ENST00000565453 HMGCRP04035 888 aa18.85■□□□□ 0.61
CDH3-204ENST00000565453 AKR1B1P15121 316 aa18.85■□□□□ 0.61
CDH3-204ENST00000565453 MAPK4P31152 587 aa18.85■□□□□ 0.61
CDH3-204ENST00000565453 CDK8P49336 464 aa18.85■□□□□ 0.61
CDH3-204ENST00000565453 TRIM32Q13049 653 aa18.85■□□□□ 0.61
CDH3-204ENST00000565453 C16orf86Q6ZW13 317 aa18.85■□□□□ 0.61
CDH3-204ENST00000565453 USP6NLQ92738 828 aa18.85■□□□□ 0.61
CDH3-204ENST00000565453 GPATCH3Q96I76 525 aa18.85■□□□□ 0.61
CDH3-204ENST00000565453 STRBPQ96SI9 672 aaKnown RBP18.85■□□□□ 0.61
CDH3-204ENST00000565453 RPAP3Q9H6T3 665 aaPredicted RBP18.85■□□□□ 0.61
CDH3-204ENST00000565453 KIAA1755Q5JYT7 1200 aa18.84■□□□□ 0.61
CDH3-204ENST00000565453 CTR9Q6PD62 1173 aa18.84■□□□□ 0.61
CDH3-204ENST00000565453 GPR142Q7Z601 462 aa18.84■□□□□ 0.61
CDH3-204ENST00000565453 SOCS4Q8WXH5 440 aa18.84■□□□□ 0.61
CDH3-204ENST00000565453 TRIB2Q92519 343 aa18.84■□□□□ 0.61
CDH3-204ENST00000565453 OSBP2Q969R2 916 aa18.84■□□□□ 0.61
CDH3-204ENST00000565453 CCDC17Q96LX7 622 aa18.84■□□□□ 0.61
CDH3-204ENST00000565453 NUDT12Q9BQG2 462 aa18.84■□□□□ 0.61
CDH3-204ENST00000565453 CRISPLD2Q9H0B8 497 aa18.84■□□□□ 0.61
CDH3-204ENST00000565453 MYH8P13535 1937 aa18.84■□□□□ 0.61
CDH3-204ENST00000565453 TTC41PQ6P2S7 1318 aa18.83■□□□□ 0.61
CDH3-204ENST00000565453 SPDYE16A6NNV3 312 aaPredicted RBP18.83■□□□□ 0.6
CDH3-204ENST00000565453 RNF113AO15541 343 aaKnown RBP18.83■□□□□ 0.6
CDH3-204ENST00000565453 XRCC5P13010 732 aaKnown RBP18.83■□□□□ 0.6
CDH3-204ENST00000565453 CAPN2P17655 700 aa18.83■□□□□ 0.6
CDH3-204ENST00000565453 CYP2B6P20813 491 aa18.83■□□□□ 0.6
CDH3-204ENST00000565453 MORN1Q5T089 497 aa18.83■□□□□ 0.6
CDH3-204ENST00000565453 PLEKHH3Q7Z736 793 aa18.83■□□□□ 0.6
CDH3-204ENST00000565453 CLEC10AQ8IUN9 316 aa18.83■□□□□ 0.6
CDH3-204ENST00000565453 PI4K2BQ8TCG2 481 aa18.83■□□□□ 0.6
CDH3-204ENST00000565453 OTUD7AQ8TE49 926 aaPredicted RBP18.83■□□□□ 0.6
CDH3-204ENST00000565453 APPBP2Q92624 585 aa18.83■□□□□ 0.6
CDH3-204ENST00000565453 DEFB118Q96PH6 123 aa18.83■□□□□ 0.6
CDH3-204ENST00000565453 CRBNQ96SW2 442 aa18.83■□□□□ 0.6
CDH3-204ENST00000565453 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.83■□□□□ 0.6
CDH3-204ENST00000565453 BTBD7Q9P203 1132 aa18.83■□□□□ 0.6
CDH3-204ENST00000565453 GSG1L2A8MUP6 293 aa18.82■□□□□ 0.6
CDH3-204ENST00000565453 FARP2O94887 1054 aaPredicted RBP18.82■□□□□ 0.6
CDH3-204ENST00000565453 AMOTL1Q8IY63 956 aa18.82■□□□□ 0.6
CDH3-204ENST00000565453 GCC1Q96CN9 775 aa18.82■□□□□ 0.6
CDH3-204ENST00000565453 DDRGK1Q96HY6 314 aa18.82■□□□□ 0.6
CDH3-204ENST00000565453 ARPP21Q9UBL0 812 aaPredicted RBP18.82■□□□□ 0.6
CDH3-204ENST00000565453 TMX2Q9Y320 296 aa18.82■□□□□ 0.6
CDH3-204ENST00000565453 RLFQ13129 1914 aa18.82■□□□□ 0.6
CDH3-204ENST00000565453 RPTORQ8N122 1335 aa18.81■□□□□ 0.6
CDH3-204ENST00000565453 SALL3Q9BXA9 1300 aa18.81■□□□□ 0.6
CDH3-204ENST00000565453 A0A0G2JMZ2 1700 aa18.81■□□□□ 0.6
CDH3-204ENST00000565453 ICA1Q05084 483 aa18.81■□□□□ 0.6
CDH3-204ENST00000565453 SBK1Q52WX2 424 aa18.81■□□□□ 0.6
CDH3-204ENST00000565453 MAP3K21Q5TCX8 1036 aa18.81■□□□□ 0.6
CDH3-204ENST00000565453 GIMAP6Q6P9H5 292 aa18.81■□□□□ 0.6
CDH3-204ENST00000565453 M0R2C6 588 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms