RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 PLCD1P51178 756 aa30.82■■■□□ 2.52
NME3-208ENST00000565379 JAG1P78504 1218 aa30.82■■■□□ 2.52
NME3-208ENST00000565379 C17orf99Q6UX52 265 aa30.82■■■□□ 2.52
NME3-208ENST00000565379 GADL1Q6ZQY3 521 aa30.82■■■□□ 2.52
NME3-208ENST00000565379 ZNF287Q9HBT7 754 aa30.82■■■□□ 2.52
NME3-208ENST00000565379 ANO2Q9NQ90 1003 aa30.82■■■□□ 2.52
NME3-208ENST00000565379 MAP4K1Q92918 833 aa30.81■■■□□ 2.52
NME3-208ENST00000565379 MINDY4BA8MYZ0 360 aa30.8■■■□□ 2.52
NME3-208ENST00000565379 LACTBP83111 547 aaPredicted RBP30.8■■■□□ 2.52
NME3-208ENST00000565379 LSG1Q9H089 658 aaKnown RBP30.8■■■□□ 2.52
NME3-208ENST00000565379 ANAPC4Q9UJX5 808 aa30.8■■■□□ 2.52
NME3-208ENST00000565379 PTCH2Q9Y6C5 1203 aa30.8■■■□□ 2.52
NME3-208ENST00000565379 ATAD5Q96QE3 1844 aa30.8■■■□□ 2.52
NME3-208ENST00000565379 ROBO3Q96MS0 1386 aa30.79■■■□□ 2.52
NME3-208ENST00000565379 GABPAQ06546 454 aa30.79■■■□□ 2.52
NME3-208ENST00000565379 PPARAQ07869 468 aa30.79■■■□□ 2.52
NME3-208ENST00000565379 ARMC5Q96C12 935 aa30.79■■■□□ 2.52
NME3-208ENST00000565379 KIAA0100Q14667 2235 aaKnown RBP30.78■■■□□ 2.52
NME3-208ENST00000565379 BRCA2P51587 3418 aa30.78■■■□□ 2.52
NME3-208ENST00000565379 ZNF213O14771 459 aa30.78■■■□□ 2.52
NME3-208ENST00000565379 CYP2D6P10635 497 aa30.78■■■□□ 2.52
NME3-208ENST00000565379 PTH1RQ03431 593 aa30.78■■■□□ 2.52
NME3-208ENST00000565379 IMMTQ16891 758 aaKnown RBP30.78■■■□□ 2.52
NME3-208ENST00000565379 BAZ2AQ9UIF9 1905 aaKnown RBP30.77■■■□□ 2.52
NME3-208ENST00000565379 POTEFA5A3E0 1075 aa30.77■■■□□ 2.52
NME3-208ENST00000565379 PCP11498 1178 aaKnown RBP30.77■■■□□ 2.52
NME3-208ENST00000565379 CAP2P40123 477 aa30.77■■■□□ 2.52
NME3-208ENST00000565379 C16orf86Q6ZW13 317 aa30.77■■■□□ 2.52
NME3-208ENST00000565379 NT5C2P49902 561 aa30.76■■■□□ 2.51
NME3-208ENST00000565379 PDE4BQ07343 736 aa30.76■■■□□ 2.51
NME3-208ENST00000565379 TREML2Q5T2D2 321 aa30.76■■■□□ 2.51
NME3-208ENST00000565379 TATDN1Q6P1N9 297 aa30.76■■■□□ 2.51
NME3-208ENST00000565379 GINM1Q9NU53 330 aa30.76■■■□□ 2.51
NME3-208ENST00000565379 CYP2D7A0A087X1C5 515 aa30.75■■■□□ 2.51
NME3-208ENST00000565379 SPP2Q13103 211 aa30.75■■■□□ 2.51
NME3-208ENST00000565379 PARK7Q99497 189 aaKnown RBP30.75■■■□□ 2.51
NME3-208ENST00000565379 MKI67P46013 3256 aaKnown RBP30.75■■■□□ 2.51
NME3-208ENST00000565379 FASTKD5Q7L8L6 764 aaKnown RBP30.74■■■□□ 2.51
NME3-208ENST00000565379 TRIM47Q96LD4 638 aa30.74■■■□□ 2.51
NME3-208ENST00000565379 RNF41Q9H4P4 317 aaPredicted RBP30.74■■■□□ 2.51
NME3-208ENST00000565379 PCDH10Q9P2E7 1040 aa30.74■■■□□ 2.51
NME3-208ENST00000565379 RBM8AQ9Y5S9 174 aaKnown RBP30.74■■■□□ 2.51
NME3-208ENST00000565379 GDF11O95390 407 aa30.73■■■□□ 2.51
NME3-208ENST00000565379 BCRP11274 1271 aa30.73■■■□□ 2.51
NME3-208ENST00000565379 CDK8P49336 464 aa30.73■■■□□ 2.51
NME3-208ENST00000565379 EVX2Q03828 476 aa30.72■■■□□ 2.51
NME3-208ENST00000565379 RNF20Q5VTR2 975 aa30.72■■■□□ 2.51
NME3-208ENST00000565379 NBPF11Q86T75 865 aa30.72■■■□□ 2.51
NME3-208ENST00000565379 CCDC17Q96LX7 622 aa30.72■■■□□ 2.51
NME3-208ENST00000565379 MKNK2Q9HBH9 465 aa30.72■■■□□ 2.51
NME3-208ENST00000565379 PSMC4P43686 418 aa30.71■■■□□ 2.51
NME3-208ENST00000565379 HMGCS2P54868 508 aa30.71■■■□□ 2.51
NME3-208ENST00000565379 KIF22Q14807 665 aa30.71■■■□□ 2.51
NME3-208ENST00000565379 ZNF280CQ8ND82 737 aa30.71■■■□□ 2.51
NME3-208ENST00000565379 DYNLL2Q96FJ2 89 aa30.71■■■□□ 2.51
NME3-208ENST00000565379 TMEM106CQ9BVX2 250 aa30.71■■■□□ 2.51
NME3-208ENST00000565379 MYCP01106 439 aaPredicted RBP30.7■■■□□ 2.51
NME3-208ENST00000565379 FGRP09769 529 aa30.7■■■□□ 2.51
NME3-208ENST00000565379 SHMT1P34896 483 aa30.7■■■□□ 2.51
NME3-208ENST00000565379 C8orf34Q49A92 452 aa30.7■■■□□ 2.51
NME3-208ENST00000565379 CERKLQ49MI3 558 aaPredicted RBP30.7■■■□□ 2.51
NME3-208ENST00000565379 SH3TC2Q8TF17 1288 aa30.7■■■□□ 2.51
NME3-208ENST00000565379 STAG1Q8WVM7 1258 aa30.7■■■□□ 2.51
NME3-208ENST00000565379 AGTPBP1Q9UPW5 1226 aa30.7■■■□□ 2.51
NME3-208ENST00000565379 LOC285556D6RIA3 1793 aa30.69■■■□□ 2.5
NME3-208ENST00000565379 USP17L5A8MUK1 530 aa30.69■■■□□ 2.5
NME3-208ENST00000565379 AKNAD1Q5T1N1 836 aa30.69■■■□□ 2.5
NME3-208ENST00000565379 MFSD6Q6ZSS7 791 aa30.69■■■□□ 2.5
NME3-208ENST00000565379 RBBP6Q7Z6E9 1792 aaKnown RBP30.69■■■□□ 2.5
NME3-208ENST00000565379 ORC4O43929 436 aa30.68■■■□□ 2.5
NME3-208ENST00000565379 OSBPP22059 807 aa30.68■■■□□ 2.5
NME3-208ENST00000565379 HAND2P61296 217 aa30.68■■■□□ 2.5
NME3-208ENST00000565379 CTDSPL2Q05D32 466 aa30.68■■■□□ 2.5
NME3-208ENST00000565379 NECTIN1Q15223 517 aa30.68■■■□□ 2.5
NME3-208ENST00000565379 SLC9C1Q4G0N8 1177 aa30.68■■■□□ 2.5
NME3-208ENST00000565379 ZNF444Q8N0Y2 327 aaPredicted RBP30.68■■■□□ 2.5
NME3-208ENST00000565379 ZNF333Q96JL9 665 aa30.68■■■□□ 2.5
NME3-208ENST00000565379 ASNSP08243 561 aa30.67■■■□□ 2.5
NME3-208ENST00000565379 EN2P19622 333 aaPredicted RBP30.67■■■□□ 2.5
NME3-208ENST00000565379 CABP5Q9NP86 173 aa30.67■■■□□ 2.5
NME3-208ENST00000565379 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.67■■■□□ 2.5
NME3-208ENST00000565379 FMNL1O95466 1100 aaPredicted RBP30.66■■■□□ 2.5
NME3-208ENST00000565379 GNRH1P01148 92 aa30.66■■■□□ 2.5
NME3-208ENST00000565379 CYP21A2P08686 494 aa30.66■■■□□ 2.5
NME3-208ENST00000565379 MTMR2Q13614 643 aa30.66■■■□□ 2.5
NME3-208ENST00000565379 SLC44A5Q8NCS7 719 aa30.66■■■□□ 2.5
NME3-208ENST00000565379 CNNM2Q9H8M5 875 aa30.66■■■□□ 2.5
NME3-208ENST00000565379 ZBTB21Q9ULJ3 1066 aa30.66■■■□□ 2.5
NME3-208ENST00000565379 SLC45A1Q9Y2W3 748 aa30.66■■■□□ 2.5
NME3-208ENST00000565379 SMIM22K7EJ46 135 aa30.65■■■□□ 2.5
NME3-208ENST00000565379 ZKSCAN1P17029 563 aaPredicted RBP30.65■■■□□ 2.5
NME3-208ENST00000565379 MCCP23508 829 aa30.65■■■□□ 2.5
NME3-208ENST00000565379 ABCB5Q2M3G0 1257 aa30.65■■■□□ 2.5
NME3-208ENST00000565379 CREB3L3Q68CJ9 461 aa30.65■■■□□ 2.5
NME3-208ENST00000565379 USP26Q9BXU7 913 aa30.65■■■□□ 2.5
NME3-208ENST00000565379 TBC1D2Q9BYX2 928 aa30.65■■■□□ 2.5
NME3-208ENST00000565379 SRRDQ9UH36 339 aa30.65■■■□□ 2.5
NME3-208ENST00000565379 LAMA4Q16363 1823 aa30.64■■■□□ 2.5
NME3-208ENST00000565379 RASA1P20936 1047 aa30.64■■■□□ 2.5
NME3-208ENST00000565379 PROCA1Q8NCQ7 364 aaPredicted RBP30.64■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms