RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 PPT2Q9UMR5 302 aa6.96□□□□□ -1.3
PALB2-203ENST00000565038 MAPK8IP1Q9UQF2 711 aa6.96□□□□□ -1.3
PALB2-203ENST00000565038 EFR3BQ9Y2G0 817 aa6.96□□□□□ -1.3
PALB2-203ENST00000565038 BNIP3Q12983 259 aa6.95□□□□□ -1.3
PALB2-203ENST00000565038 ZNF746Q6NUN9 644 aaPredicted RBP6.95□□□□□ -1.3
PALB2-203ENST00000565038 ATG4CQ96DT6 458 aa6.95□□□□□ -1.3
PALB2-203ENST00000565038 CCDC74BQ96LY2 380 aa6.95□□□□□ -1.3
PALB2-203ENST00000565038 MKNK2Q9HBH9 465 aa6.95□□□□□ -1.3
PALB2-203ENST00000565038 INPP5FQ9Y2H2 1132 aa6.95□□□□□ -1.3
PALB2-203ENST00000565038 RAG1P15918 1043 aa6.94□□□□□ -1.3
PALB2-203ENST00000565038 POLR2BP30876 1174 aaKnown RBP6.94□□□□□ -1.3
PALB2-203ENST00000565038 ETV3P41162 512 aa6.94□□□□□ -1.3
PALB2-203ENST00000565038 IFI16Q16666 785 aaKnown RBP6.94□□□□□ -1.3
PALB2-203ENST00000565038 NKPD1Q17RQ9 610 aa6.94□□□□□ -1.3
PALB2-203ENST00000565038 CCDC81Q6ZN84 652 aa6.94□□□□□ -1.3
PALB2-203ENST00000565038 CCDC39Q9UFE4 941 aa6.94□□□□□ -1.3
PALB2-203ENST00000565038 ZNRF3Q9ULT6 936 aa6.94□□□□□ -1.3
PALB2-203ENST00000565038 ANGEL1Q9UNK9 670 aaKnown RBP6.94□□□□□ -1.3
PALB2-203ENST00000565038 FAM155AB1AL88 458 aaPredicted RBP6.93□□□□□ -1.3
PALB2-203ENST00000565038 WNT11O96014 354 aa6.93□□□□□ -1.3
PALB2-203ENST00000565038 CYP7A1P22680 504 aa6.93□□□□□ -1.3
PALB2-203ENST00000565038 GBP1P32455 592 aa6.93□□□□□ -1.3
PALB2-203ENST00000565038 CD96P40200 585 aa6.93□□□□□ -1.3
PALB2-203ENST00000565038 GJA8P48165 433 aa6.93□□□□□ -1.3
PALB2-203ENST00000565038 CDKAL1Q5VV42 579 aa6.93□□□□□ -1.3
PALB2-203ENST00000565038 NLRC3Q7RTR2 1065 aa6.93□□□□□ -1.3
PALB2-203ENST00000565038 NBPF11Q86T75 865 aa6.93□□□□□ -1.3
PALB2-203ENST00000565038 SPACA3Q8IXA5 215 aa6.93□□□□□ -1.3
PALB2-203ENST00000565038 MFSD4AQ8N468 514 aa6.93□□□□□ -1.3
PALB2-203ENST00000565038 TMEM40Q8WWA1 233 aa6.93□□□□□ -1.3
PALB2-203ENST00000565038 CNNM2Q9H8M5 875 aa6.93□□□□□ -1.3
PALB2-203ENST00000565038 CAPN10Q9HC96 672 aa6.93□□□□□ -1.3
PALB2-203ENST00000565038 IGSF5Q9NSI5 407 aa6.93□□□□□ -1.3
PALB2-203ENST00000565038 TMEM265A0A087WTH1 108 aa6.92□□□□□ -1.3
PALB2-203ENST00000565038 FAM86C2PA6NEL3 165 aa6.92□□□□□ -1.3
PALB2-203ENST00000565038 RGS13O14921 159 aa6.92□□□□□ -1.3
PALB2-203ENST00000565038 UBOX5O94941 541 aa6.92□□□□□ -1.3
PALB2-203ENST00000565038 PRNPP04156 253 aa6.92□□□□□ -1.3
PALB2-203ENST00000565038 NASPP49321 788 aaPredicted RBP6.92□□□□□ -1.3
PALB2-203ENST00000565038 AOC3Q16853 763 aa6.92□□□□□ -1.3
PALB2-203ENST00000565038 CDCP2Q5VXM1 449 aa6.92□□□□□ -1.3
PALB2-203ENST00000565038 ZNF574Q6ZN55 896 aaPredicted RBP6.92□□□□□ -1.3
PALB2-203ENST00000565038 NFXL1Q6ZNB6 911 aa6.92□□□□□ -1.3
PALB2-203ENST00000565038 RASGRP4Q8TDF6 673 aa6.92□□□□□ -1.3
PALB2-203ENST00000565038 BCL7CQ8WUZ0 217 aaPredicted RBP6.92□□□□□ -1.3
PALB2-203ENST00000565038 TNKS2Q9H2K2 1166 aa6.92□□□□□ -1.3
PALB2-203ENST00000565038 CAPN6Q9Y6Q1 641 aa6.92□□□□□ -1.3
PALB2-203ENST00000565038 LRRN2O75325 713 aa6.91□□□□□ -1.3
PALB2-203ENST00000565038 ZNF865P0CJ78 1059 aaPredicted RBP6.91□□□□□ -1.3
PALB2-203ENST00000565038 NME1P15531 152 aaKnown RBP6.91□□□□□ -1.3
PALB2-203ENST00000565038 SOX9P48436 509 aa6.91□□□□□ -1.3
PALB2-203ENST00000565038 TNK2Q07912 1038 aa6.91□□□□□ -1.3
PALB2-203ENST00000565038 LRRFIP1Q32MZ4 808 aaKnown RBP6.91□□□□□ -1.3
PALB2-203ENST00000565038 C22orf34Q6ZV56 151 aa6.91□□□□□ -1.3
PALB2-203ENST00000565038 SPRED2Q7Z698 418 aa6.91□□□□□ -1.3
PALB2-203ENST00000565038 VSIG10LQ86VR7 867 aa6.91□□□□□ -1.3
PALB2-203ENST00000565038 FLCNQ8NFG4 579 aa6.91□□□□□ -1.3
PALB2-203ENST00000565038 HRASLS5Q96KN8 279 aa6.91□□□□□ -1.3
PALB2-203ENST00000565038 HSPA12BQ96MM6 686 aa6.91□□□□□ -1.3
PALB2-203ENST00000565038 KREMEN1Q96MU8 473 aa6.91□□□□□ -1.3
PALB2-203ENST00000565038 SLC5A6Q9Y289 635 aa6.91□□□□□ -1.3
PALB2-203ENST00000565038 MEIS3P2A8K0S8 358 aa6.9□□□□□ -1.3
PALB2-203ENST00000565038 H3BS24 57 aa6.9□□□□□ -1.3
PALB2-203ENST00000565038 IMPDH2P12268 514 aa6.9□□□□□ -1.3
PALB2-203ENST00000565038 CHMP4BP1P59074 171 aa6.9□□□□□ -1.3
PALB2-203ENST00000565038 PRKCQQ04759 706 aa6.9□□□□□ -1.3
PALB2-203ENST00000565038 RUFY4Q6ZNE9 571 aa6.9□□□□□ -1.3
PALB2-203ENST00000565038 SPATA32Q96LK8 384 aa6.9□□□□□ -1.3
PALB2-203ENST00000565038 Q96M66 194 aa6.9□□□□□ -1.3
PALB2-203ENST00000565038 SLC9A7Q96T83 725 aa6.9□□□□□ -1.3
PALB2-203ENST00000565038 VAV3Q9UKW4 847 aa6.9□□□□□ -1.3
PALB2-203ENST00000565038 COL17A1Q9UMD9 1497 aaPredicted RBP6.9□□□□□ -1.31
PALB2-203ENST00000565038 CD8BP10966 210 aa6.89□□□□□ -1.31
PALB2-203ENST00000565038 KIR3DL1P43629 444 aa6.89□□□□□ -1.31
PALB2-203ENST00000565038 GP2P55259 537 aaKnown RBP6.89□□□□□ -1.31
PALB2-203ENST00000565038 COL9A2Q14055 689 aaPredicted RBP6.89□□□□□ -1.31
PALB2-203ENST00000565038 WFDC3Q8IUB2 231 aa6.89□□□□□ -1.31
PALB2-203ENST00000565038 TP53INP2Q8IXH6 220 aa6.89□□□□□ -1.31
PALB2-203ENST00000565038 STK11IPQ8N1F8 1099 aa6.89□□□□□ -1.31
PALB2-203ENST00000565038 RNF141Q8WVD5 230 aa6.89□□□□□ -1.31
PALB2-203ENST00000565038 MISP3Q96FF7 219 aa6.89□□□□□ -1.31
PALB2-203ENST00000565038 COX4I2Q96KJ9 171 aa6.89□□□□□ -1.31
PALB2-203ENST00000565038 CRBNQ96SW2 442 aa6.89□□□□□ -1.31
PALB2-203ENST00000565038 PAK6Q9NQU5 681 aaPredicted RBP6.89□□□□□ -1.31
PALB2-203ENST00000565038 SNX11Q9Y5W9 270 aa6.89□□□□□ -1.31
PALB2-203ENST00000565038 ST14Q9Y5Y6 855 aa6.89□□□□□ -1.31
PALB2-203ENST00000565038 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
PALB2-203ENST00000565038 TNFRSF10CO14798 259 aa6.88□□□□□ -1.31
PALB2-203ENST00000565038 ACRP10323 421 aa6.88□□□□□ -1.31
PALB2-203ENST00000565038 CLCN7P51798 805 aa6.88□□□□□ -1.31
PALB2-203ENST00000565038 LSRQ86X29 649 aaPredicted RBP6.88□□□□□ -1.31
PALB2-203ENST00000565038 CPLX3Q8WVH0 158 aa6.88□□□□□ -1.31
PALB2-203ENST00000565038 ZNF512BQ96KM6 892 aaPredicted RBP6.88□□□□□ -1.31
PALB2-203ENST00000565038 SRRTQ9BXP5 876 aaKnown RBP6.88□□□□□ -1.31
PALB2-203ENST00000565038 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
PALB2-203ENST00000565038 ATP13A1Q9HD20 1204 aa6.88□□□□□ -1.31
PALB2-203ENST00000565038 SEMA3GQ9NS98 782 aa6.88□□□□□ -1.31
PALB2-203ENST00000565038 ZSWIM5Q9P217 1185 aa6.88□□□□□ -1.31
PALB2-203ENST00000565038 OAS3Q9Y6K5 1087 aaKnown RBP6.88□□□□□ -1.31
PALB2-203ENST00000565038 PITPNM2Q9BZ72 1349 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms