RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 KANK3Q6NY19 840 aa17.45■□□□□ 0.38
HERC2-207ENST00000564734 SMARCC1Q92922 1105 aaPredicted RBP17.45■□□□□ 0.38
HERC2-207ENST00000564734 TNFRSF25Q93038 417 aa17.45■□□□□ 0.38
HERC2-207ENST00000564734 SMARCE1Q969G3 411 aa17.45■□□□□ 0.38
HERC2-207ENST00000564734 VPS54Q9P1Q0 977 aa17.45■□□□□ 0.38
HERC2-207ENST00000564734 ZNF831Q5JPB2 1677 aa17.45■□□□□ 0.38
HERC2-207ENST00000564734 SLU7O95391 586 aaKnown RBP17.45■□□□□ 0.38
HERC2-207ENST00000564734 SLC10A5Q5PT55 438 aa17.45■□□□□ 0.38
HERC2-207ENST00000564734 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.45■□□□□ 0.38
HERC2-207ENST00000564734 A0A087X0B3 334 aa17.44■□□□□ 0.38
HERC2-207ENST00000564734 PLEKHA8P1O95397 391 aa17.44■□□□□ 0.38
HERC2-207ENST00000564734 TOP1P11387 765 aaKnown RBP17.44■□□□□ 0.38
HERC2-207ENST00000564734 NPY5RQ15761 445 aa17.44■□□□□ 0.38
HERC2-207ENST00000564734 CAVIN4Q5BKX8 364 aa17.44■□□□□ 0.38
HERC2-207ENST00000564734 SYT10Q6XYQ8 523 aa17.44■□□□□ 0.38
HERC2-207ENST00000564734 RBM28Q9NW13 759 aaKnown RBP17.44■□□□□ 0.38
HERC2-207ENST00000564734 IFIT1BQ5T764 474 aaKnown RBP17.44■□□□□ 0.38
HERC2-207ENST00000564734 SH3RF1Q7Z6J0 888 aa17.44■□□□□ 0.38
HERC2-207ENST00000564734 REXO1L1PQ8IX06 675 aa17.44■□□□□ 0.38
HERC2-207ENST00000564734 LINC00116Q8NCU8 138 aa17.44■□□□□ 0.38
HERC2-207ENST00000564734 DACH1Q9UI36 760 aa17.44■□□□□ 0.38
HERC2-207ENST00000564734 CASZ1Q86V15 1759 aa17.44■□□□□ 0.38
HERC2-207ENST00000564734 TRIM75PA6NK02 468 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 SPDYE4A6NLX3 237 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 KRT2P35908 639 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 TRIM65Q6PJ69 517 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 CATIPQ7Z7H3 387 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 FCHSD1Q86WN1 690 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 CELF1Q92879 486 aaKnown RBP17.43■□□□□ 0.38
HERC2-207ENST00000564734 CCP110O43303 1012 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 XBP1P17861 261 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 NFE2L3Q9Y4A8 694 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 V9GY48 417 aaPredicted RBP17.43■□□□□ 0.38
HERC2-207ENST00000564734 TAF1P21675 1872 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 WNT7AO00755 349 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 SEMA3EO15041 775 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 PRDM1O75626 825 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 DDAH1O94760 285 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 TRIM37O94972 964 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 CALM1P0DP23 149 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 CALM2P0DP24 149 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 CALM3P0DP25 149 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 ZSCAN20P17040 1043 aaPredicted RBP17.43■□□□□ 0.38
HERC2-207ENST00000564734 ATP2B1P20020 1258 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 AKAP17AQ02040 695 aaKnown RBP17.43■□□□□ 0.38
HERC2-207ENST00000564734 GOLGA8FQ08AF8 430 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 GOLGA8DPQ0D2H9 430 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 PTPN21Q16825 1174 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 ZNF827Q17R98 1081 aa17.43■□□□□ 0.38
HERC2-207ENST00000564734 NSUN4Q96CB9 384 aaKnown RBP17.43■□□□□ 0.38
HERC2-207ENST00000564734 PDS5AQ29RF7 1337 aaKnown RBP17.42■□□□□ 0.38
HERC2-207ENST00000564734 RGL2O15211 777 aa17.42■□□□□ 0.38
HERC2-207ENST00000564734 TMTC3Q6ZXV5 915 aa17.42■□□□□ 0.38
HERC2-207ENST00000564734 OGFRQ9NZT2 677 aa17.42■□□□□ 0.38
HERC2-207ENST00000564734 ORC4O43929 436 aa17.42■□□□□ 0.38
HERC2-207ENST00000564734 ERCC5P28715 1186 aaPredicted RBP17.42■□□□□ 0.38
HERC2-207ENST00000564734 ETF1P62495 437 aaKnown RBP17.42■□□□□ 0.38
HERC2-207ENST00000564734 PDILTQ8N807 584 aa17.42■□□□□ 0.38
HERC2-207ENST00000564734 MYH6P13533 1939 aa17.41■□□□□ 0.38
HERC2-207ENST00000564734 hCG_1642624A0A1W2PR95 340 aa17.41■□□□□ 0.38
HERC2-207ENST00000564734 KLRK1P26718 216 aa17.41■□□□□ 0.38
HERC2-207ENST00000564734 PLCD1P51178 756 aa17.41■□□□□ 0.38
HERC2-207ENST00000564734 EVX2Q03828 476 aa17.41■□□□□ 0.38
HERC2-207ENST00000564734 CT47A1Q5JQC4 288 aaPredicted RBP17.41■□□□□ 0.38
HERC2-207ENST00000564734 ZNF397Q8NF99 534 aaPredicted RBP17.41■□□□□ 0.38
HERC2-207ENST00000564734 EPSTI1Q96J88 318 aa17.41■□□□□ 0.38
HERC2-207ENST00000564734 DDX41Q9UJV9 622 aaKnown RBP17.41■□□□□ 0.38
HERC2-207ENST00000564734 PHLPP2Q6ZVD8 1323 aa17.41■□□□□ 0.38
HERC2-207ENST00000564734 USP17L12C9JPN9 530 aa17.41■□□□□ 0.38
HERC2-207ENST00000564734 USP17L21D6R901 530 aa17.41■□□□□ 0.38
HERC2-207ENST00000564734 KMT5BQ4FZB7 885 aa17.41■□□□□ 0.38
HERC2-207ENST00000564734 IQCA1Q86XH1 822 aa17.41■□□□□ 0.38
HERC2-207ENST00000564734 BAZ2AQ9UIF9 1905 aaKnown RBP17.41■□□□□ 0.38
HERC2-207ENST00000564734 MYH2Q9UKX2 1941 aa17.41■□□□□ 0.38
HERC2-207ENST00000564734 CNTNAP5Q8WYK1 1306 aa17.41■□□□□ 0.38
HERC2-207ENST00000564734 FANCGO15287 622 aa17.41■□□□□ 0.38
HERC2-207ENST00000564734 SLFN14P0C7P3 912 aa17.41■□□□□ 0.38
HERC2-207ENST00000564734 NOM1Q5C9Z4 860 aaKnown RBP17.41■□□□□ 0.38
HERC2-207ENST00000564734 TRMT44Q8IYL2 757 aaKnown RBP17.41■□□□□ 0.38
HERC2-207ENST00000564734 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.41■□□□□ 0.38
HERC2-207ENST00000564734 V9GYY5 206 aaPredicted RBP17.41■□□□□ 0.38
HERC2-207ENST00000564734 MECOMQ03112 1051 aa17.4■□□□□ 0.38
HERC2-207ENST00000564734 NR1I3Q14994 352 aa17.4■□□□□ 0.38
HERC2-207ENST00000564734 TC2NQ8N9U0 490 aa17.4■□□□□ 0.38
HERC2-207ENST00000564734 FERMT2Q96AC1 680 aa17.4■□□□□ 0.38
HERC2-207ENST00000564734 PAGE5Q96GU1 130 aa17.4■□□□□ 0.38
HERC2-207ENST00000564734 PRDM10Q9NQV6 1147 aa17.4■□□□□ 0.38
HERC2-207ENST00000564734 ARHGAP6O43182 974 aa17.4■□□□□ 0.38
HERC2-207ENST00000564734 ELF2Q15723 593 aa17.4■□□□□ 0.38
HERC2-207ENST00000564734 HSP90AA4PQ58FG1 418 aa17.4■□□□□ 0.38
HERC2-207ENST00000564734 TBC1D9BQ66K14 1250 aa17.4■□□□□ 0.38
HERC2-207ENST00000564734 APTXQ7Z2E3 356 aaKnown RBP17.4■□□□□ 0.38
HERC2-207ENST00000564734 SRBD1Q8N5C6 995 aaKnown RBP17.4■□□□□ 0.38
HERC2-207ENST00000564734 SAMSN1Q9NSI8 373 aaKnown RBP17.4■□□□□ 0.38
HERC2-207ENST00000564734 BMP15O95972 392 aa17.39■□□□□ 0.37
HERC2-207ENST00000564734 LRRN4CLQ8ND94 238 aa17.39■□□□□ 0.37
HERC2-207ENST00000564734 DHX58Q96C10 678 aa17.39■□□□□ 0.37
HERC2-207ENST00000564734 BCL11BQ9C0K0 894 aaPredicted RBP17.39■□□□□ 0.37
HERC2-207ENST00000564734 DCP1AQ9NPI6 582 aaPredicted RBP17.39■□□□□ 0.37
HERC2-207ENST00000564734 PRDM4Q9UKN5 801 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms