RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 TFAP4Q01664 338 aa18.94■□□□□ 0.62
RAB40C-208ENST00000564703 MTMR2Q13614 643 aa18.94■□□□□ 0.62
RAB40C-208ENST00000564703 RRP12Q5JTH9 1297 aaKnown RBP18.94■□□□□ 0.62
RAB40C-208ENST00000564703 USP17L2Q6R6M4 530 aa18.94■□□□□ 0.62
RAB40C-208ENST00000564703 ANKRD23Q86SG2 305 aa18.94■□□□□ 0.62
RAB40C-208ENST00000564703 PROCA1Q8NCQ7 364 aaPredicted RBP18.94■□□□□ 0.62
RAB40C-208ENST00000564703 IL25Q9H293 177 aa18.94■□□□□ 0.62
RAB40C-208ENST00000564703 SH2D4AQ9H788 454 aa18.94■□□□□ 0.62
RAB40C-208ENST00000564703 ZCCHC17Q9NP64 241 aaKnown RBP18.94■□□□□ 0.62
RAB40C-208ENST00000564703 TSPY2A6NKD2 308 aa18.93■□□□□ 0.62
RAB40C-208ENST00000564703 FOXN1O15353 648 aa18.93■□□□□ 0.62
RAB40C-208ENST00000564703 TBC1D8O95759 1140 aa18.93■□□□□ 0.62
RAB40C-208ENST00000564703 GUCY1A2P33402 732 aa18.93■□□□□ 0.62
RAB40C-208ENST00000564703 ATP2B2Q01814 1243 aa18.93■□□□□ 0.62
RAB40C-208ENST00000564703 ICA1Q05084 483 aa18.93■□□□□ 0.62
RAB40C-208ENST00000564703 PABPC4Q13310 644 aaKnown RBP eCLIP18.93■□□□□ 0.62
RAB40C-208ENST00000564703 TAF1CQ15572 869 aaPredicted RBP18.93■□□□□ 0.62
RAB40C-208ENST00000564703 PPP4R3BQ5MIZ7 849 aa18.93■□□□□ 0.62
RAB40C-208ENST00000564703 AKNAD1Q5T1N1 836 aa18.93■□□□□ 0.62
RAB40C-208ENST00000564703 ZFYVE28Q9HCC9 887 aa18.93■□□□□ 0.62
RAB40C-208ENST00000564703 ANO2Q9NQ90 1003 aa18.93■□□□□ 0.62
RAB40C-208ENST00000564703 PDHXO00330 501 aa18.92■□□□□ 0.62
RAB40C-208ENST00000564703 PTH1RQ03431 593 aa18.92■□□□□ 0.62
RAB40C-208ENST00000564703 SH3D19Q5HYK7 790 aa18.92■□□□□ 0.62
RAB40C-208ENST00000564703 FAM43AQ8N2R8 423 aa18.92■□□□□ 0.62
RAB40C-208ENST00000564703 MAP4K1Q92918 833 aa18.92■□□□□ 0.62
RAB40C-208ENST00000564703 KIAA1683Q9H0B3 1180 aa18.92■□□□□ 0.62
RAB40C-208ENST00000564703 INCENPQ9NQS7 918 aa18.92■□□□□ 0.62
RAB40C-208ENST00000564703 TSKSQ9UJT2 592 aa18.92■□□□□ 0.62
RAB40C-208ENST00000564703 THSD7BQ9C0I4 1608 aa18.92■□□□□ 0.62
RAB40C-208ENST00000564703 ORC4O43929 436 aa18.91■□□□□ 0.62
RAB40C-208ENST00000564703 OSBPP22059 807 aa18.91■□□□□ 0.62
RAB40C-208ENST00000564703 ZYXQ15942 572 aaKnown RBP18.91■□□□□ 0.62
RAB40C-208ENST00000564703 FAM47AQ5JRC9 791 aa18.91■□□□□ 0.62
RAB40C-208ENST00000564703 NEDD1Q8NHV4 660 aa18.91■□□□□ 0.62
RAB40C-208ENST00000564703 ACER1Q8TDN7 264 aa18.91■□□□□ 0.62
RAB40C-208ENST00000564703 AGTPBP1Q9UPW5 1226 aa18.91■□□□□ 0.62
RAB40C-208ENST00000564703 LAMB1P07942 1786 aa18.91■□□□□ 0.62
RAB40C-208ENST00000564703 FGRP09769 529 aa18.9■□□□□ 0.62
RAB40C-208ENST00000564703 EEF2P13639 858 aaKnown RBP18.9■□□□□ 0.62
RAB40C-208ENST00000564703 NT5C2P49902 561 aa18.9■□□□□ 0.62
RAB40C-208ENST00000564703 LBX1P52954 281 aa18.9■□□□□ 0.62
RAB40C-208ENST00000564703 TRDNQ13061 729 aa18.9■□□□□ 0.62
RAB40C-208ENST00000564703 STAG1Q8WVM7 1258 aa18.9■□□□□ 0.62
RAB40C-208ENST00000564703 ESR2Q92731 530 aa18.9■□□□□ 0.62
RAB40C-208ENST00000564703 NYAP2Q9P242 653 aa18.9■□□□□ 0.62
RAB40C-208ENST00000564703 CLIP2Q9UDT6 1046 aa18.9■□□□□ 0.62
RAB40C-208ENST00000564703 PNMA3Q9UL41 463 aa18.9■□□□□ 0.62
RAB40C-208ENST00000564703 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.9■□□□□ 0.62
RAB40C-208ENST00000564703 SLC45A1Q9Y2W3 748 aa18.9■□□□□ 0.62
RAB40C-208ENST00000564703 PHIPQ8WWQ0 1821 aa18.89■□□□□ 0.61
RAB40C-208ENST00000564703 RAD21O60216 631 aa18.89■□□□□ 0.61
RAB40C-208ENST00000564703 MOGSQ13724 837 aa18.89■□□□□ 0.61
RAB40C-208ENST00000564703 GPAT2Q6NUI2 795 aa18.89■□□□□ 0.61
RAB40C-208ENST00000564703 PARK7Q99497 189 aaKnown RBP18.89■□□□□ 0.61
RAB40C-208ENST00000564703 CFHR5Q9BXR6 569 aa18.89■□□□□ 0.61
RAB40C-208ENST00000564703 KRT23Q9C075 422 aa18.89■□□□□ 0.61
RAB40C-208ENST00000564703 CNNM2Q9H8M5 875 aa18.89■□□□□ 0.61
RAB40C-208ENST00000564703 TMX2Q9Y320 296 aa18.89■□□□□ 0.61
RAB40C-208ENST00000564703 TTLL1O95922 423 aa18.88■□□□□ 0.61
RAB40C-208ENST00000564703 HSPA8P11142 646 aaKnown RBP18.88■□□□□ 0.61
RAB40C-208ENST00000564703 CRHR2Q13324 411 aa18.88■□□□□ 0.61
RAB40C-208ENST00000564703 GOPCQ9HD26 462 aa18.88■□□□□ 0.61
RAB40C-208ENST00000564703 EMILIN3Q9NT22 766 aa18.88■□□□□ 0.61
RAB40C-208ENST00000564703 MTMR4Q9NYA4 1195 aa18.88■□□□□ 0.61
RAB40C-208ENST00000564703 RBM8AQ9Y5S9 174 aaKnown RBP18.88■□□□□ 0.61
RAB40C-208ENST00000564703 A0A1W2PRG0 241 aa18.87■□□□□ 0.61
RAB40C-208ENST00000564703 REC8O95072 547 aa18.87■□□□□ 0.61
RAB40C-208ENST00000564703 IRX3P78415 501 aaPredicted RBP18.87■□□□□ 0.61
RAB40C-208ENST00000564703 TREML2Q5T2D2 321 aa18.87■□□□□ 0.61
RAB40C-208ENST00000564703 RNF20Q5VTR2 975 aa18.87■□□□□ 0.61
RAB40C-208ENST00000564703 SIAH1Q8IUQ4 282 aa18.87■□□□□ 0.61
RAB40C-208ENST00000564703 TBC1D10CQ8IV04 446 aa18.87■□□□□ 0.61
RAB40C-208ENST00000564703 SMCR8Q8TEV9 937 aaPredicted RBP18.87■□□□□ 0.61
RAB40C-208ENST00000564703 CEP95Q96GE4 821 aa18.87■□□□□ 0.61
RAB40C-208ENST00000564703 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.87■□□□□ 0.61
RAB40C-208ENST00000564703 LSG1Q9H089 658 aaKnown RBP18.87■□□□□ 0.61
RAB40C-208ENST00000564703 USP17L15C9J2P7 530 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 USP17L13C9JLJ4 530 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 USP17L11C9JVI0 530 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 USP17L18D6R9N7 530 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 USP17L22D6RA61 530 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 USP17L17D6RBQ6 530 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 USP17L19D6RCP7 530 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 USP17L20D6RJB6 530 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 GPR25O00155 361 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 TLR2O60603 784 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 HOXA7P31268 230 aaPredicted RBP18.86■□□□□ 0.61
RAB40C-208ENST00000564703 USP17L24Q0WX57 530 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 CCDC178Q5BJE1 867 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 IQCA1Q86XH1 822 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 CLEC10AQ8IUN9 316 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 LPAR1Q92633 364 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 C12orf42Q96LP6 360 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 VCPKMTQ9H867 229 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 STX8Q9UNK0 236 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 GTF3C3Q9Y5Q9 886 aa18.86■□□□□ 0.61
RAB40C-208ENST00000564703 IGKV6D-41A0A0C4DH26 115 aa18.85■□□□□ 0.61
RAB40C-208ENST00000564703 EIF5BO60841 1220 aaKnown RBP18.85■□□□□ 0.61
RAB40C-208ENST00000564703 CYP21A2P08686 494 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms