RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 RAD18Q9NS91 495 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 WISP1O95388 367 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 NAT2P11245 290 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 FOXB2Q5VYV0 432 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 SLC16A10Q8TF71 515 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 PPP1R13LQ8WUF5 828 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 DHRS1Q96LJ7 313 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 CCDC74BQ96LY2 380 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 RUSC1Q9BVN2 902 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 CD2APQ9Y5K6 639 aa3.67□□□□□ -1.82
CHD9-209ENST00000564255 A0A0A0MRY4 1105 aa3.66□□□□□ -1.82
CHD9-209ENST00000564255 ANKRD34BA5PLL1 514 aa3.66□□□□□ -1.82
CHD9-209ENST00000564255 KCNQ2O43526 872 aa3.66□□□□□ -1.82
CHD9-209ENST00000564255 ADH5P11766 374 aa3.66□□□□□ -1.82
CHD9-209ENST00000564255 UBE3DQ7Z6J8 389 aa3.66□□□□□ -1.82
CHD9-209ENST00000564255 FMR1NBQ8N0W7 255 aaPredicted RBP3.66□□□□□ -1.82
CHD9-209ENST00000564255 VWCEQ96DN2 955 aa3.66□□□□□ -1.82
CHD9-209ENST00000564255 SLC6A18Q96N87 628 aa3.66□□□□□ -1.82
CHD9-209ENST00000564255 ARHGEF4Q9NR80 690 aa3.66□□□□□ -1.82
CHD9-209ENST00000564255 TYW1Q9NV66 732 aaKnown RBP3.66□□□□□ -1.82
CHD9-209ENST00000564255 COL17A1Q9UMD9 1497 aaPredicted RBP3.66□□□□□ -1.82
CHD9-209ENST00000564255 TIAF1O95411 115 aa3.66□□□□□ -1.82
CHD9-209ENST00000564255 SOX4Q06945 474 aaPredicted RBP3.66□□□□□ -1.82
CHD9-209ENST00000564255 DUOXA2Q1HG44 320 aa3.66□□□□□ -1.82
CHD9-209ENST00000564255 PLEKHG6Q3KR16 790 aa3.66□□□□□ -1.82
CHD9-209ENST00000564255 ANKRD39Q53RE8 183 aa3.66□□□□□ -1.82
CHD9-209ENST00000564255 BAHD1Q8TBE0 780 aaPredicted RBP3.66□□□□□ -1.82
CHD9-209ENST00000564255 EXOC2Q96KP1 924 aa3.66□□□□□ -1.82
CHD9-209ENST00000564255 APBA2Q99767 749 aa3.66□□□□□ -1.82
CHD9-209ENST00000564255 PLD2O14939 933 aa3.65□□□□□ -1.82
CHD9-209ENST00000564255 MARCH6O60337 910 aa3.65□□□□□ -1.82
CHD9-209ENST00000564255 POU3F3P20264 500 aaPredicted RBP3.65□□□□□ -1.82
CHD9-209ENST00000564255 PABPC4Q13310 644 aaKnown RBP eCLIP3.65□□□□□ -1.82
CHD9-209ENST00000564255 NKG7Q16617 165 aa3.65□□□□□ -1.82
CHD9-209ENST00000564255 FNDC3BQ53EP0 1204 aaKnown RBP3.65□□□□□ -1.82
CHD9-209ENST00000564255 AKAP4Q5JQC9 854 aa3.65□□□□□ -1.82
CHD9-209ENST00000564255 THNSL2Q86YJ6 484 aa3.65□□□□□ -1.82
CHD9-209ENST00000564255 PHACTR4Q8IZ21 702 aa3.65□□□□□ -1.82
CHD9-209ENST00000564255 IRF7Q92985 503 aa3.65□□□□□ -1.82
CHD9-209ENST00000564255 ISL2Q96A47 359 aa3.65□□□□□ -1.82
CHD9-209ENST00000564255 MFSD3Q96ES6 412 aa3.65□□□□□ -1.82
CHD9-209ENST00000564255 DHRS4Q9BTZ2 278 aa3.65□□□□□ -1.82
CHD9-209ENST00000564255 KLHL25Q9H0H3 589 aa3.65□□□□□ -1.82
CHD9-209ENST00000564255 RNF208Q9H0X6 261 aa3.65□□□□□ -1.82
CHD9-209ENST00000564255 DDX56Q9NY93 547 aaKnown RBP3.65□□□□□ -1.82
CHD9-209ENST00000564255 TRAV20A0A0B4J274 112 aa3.65□□□□□ -1.83
CHD9-209ENST00000564255 FAM86C2PA6NEL3 165 aa3.65□□□□□ -1.83
CHD9-209ENST00000564255 C9IYK1 514 aa3.65□□□□□ -1.83
CHD9-209ENST00000564255 HCLS1P14317 486 aaPredicted RBP3.65□□□□□ -1.83
CHD9-209ENST00000564255 TTLL4Q14679 1199 aa3.65□□□□□ -1.83
CHD9-209ENST00000564255 LINC00114Q6XXX2 140 aa3.65□□□□□ -1.83
CHD9-209ENST00000564255 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.65□□□□□ -1.83
CHD9-209ENST00000564255 CYB5D2Q8WUJ1 264 aa3.65□□□□□ -1.83
CHD9-209ENST00000564255 STAG1Q8WVM7 1258 aa3.65□□□□□ -1.83
CHD9-209ENST00000564255 AARSD1Q9BTE6 412 aaKnown RBP3.65□□□□□ -1.83
CHD9-209ENST00000564255 FOXQ1Q9C009 403 aa3.65□□□□□ -1.83
CHD9-209ENST00000564255 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.65□□□□□ -1.83
CHD9-209ENST00000564255 CYP4F12Q9HCS2 524 aa3.65□□□□□ -1.83
CHD9-209ENST00000564255 PICK1Q9NRD5 415 aa3.65□□□□□ -1.83
CHD9-209ENST00000564255 GBP1P32455 592 aa3.65□□□□□ -1.83
CHD9-209ENST00000564255 HSP90AA2PQ14568 343 aaPredicted RBP3.65□□□□□ -1.83
CHD9-209ENST00000564255 SV2CQ496J9 727 aa3.65□□□□□ -1.83
CHD9-209ENST00000564255 AXDND1Q5T1B0 1012 aaPredicted RBP3.65□□□□□ -1.83
CHD9-209ENST00000564255 TRAPPC3LQ5T215 181 aa3.65□□□□□ -1.83
CHD9-209ENST00000564255 C2CD4AQ8NCU7 369 aaPredicted RBP3.65□□□□□ -1.83
CHD9-209ENST00000564255 DNAJB8Q8NHS0 232 aa3.65□□□□□ -1.83
CHD9-209ENST00000564255 MRGPRX3Q96LB0 322 aa3.65□□□□□ -1.83
CHD9-209ENST00000564255 MRPL4Q9BYD3 311 aaKnown RBP3.65□□□□□ -1.83
CHD9-209ENST00000564255 NCOA5Q9HCD5 579 aaKnown RBP3.65□□□□□ -1.83
CHD9-209ENST00000564255 PCOLCE2Q9UKZ9 415 aa3.65□□□□□ -1.83
CHD9-209ENST00000564255 DNAJC25-GNG10A0A024R161 153 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 A0A087X0B3 334 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 AGRPO00253 132 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 CBFA2T2O43439 604 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 CLEC3AO75596 197 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 LRIG2O94898 1065 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 FGFR1P11362 822 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 LCE2CQ5TA81 110 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 PRAMEF13Q5VWM6 474 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 NIM1KQ8IY84 436 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 MFSD2AQ8NA29 543 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 TRIM11Q96F44 468 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 HAUS7Q99871 368 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 CEP131Q9UPN4 1083 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 MRPS23Q9Y3D9 190 aaKnown RBP3.64□□□□□ -1.83
CHD9-209ENST00000564255 TRBV23-1A0A0A0MS06 115 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 EPHX1P07099 455 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 L1CAMP32004 1257 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 RAC1P63000 192 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 CBX2Q14781 532 aaPredicted RBP3.64□□□□□ -1.83
CHD9-209ENST00000564255 FAM209AQ5JX71 171 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 TDRD10Q5VZ19 366 aaKnown RBP3.64□□□□□ -1.83
CHD9-209ENST00000564255 NUTM2GQ5VZR2 741 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 HEATR6Q6AI08 1181 aaKnown RBP3.64□□□□□ -1.83
CHD9-209ENST00000564255 ACAD11Q709F0 780 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 CDC37L1Q7L3B6 337 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 ZNF227Q86WZ6 799 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 SCUBE1Q8IWY4 988 aa3.64□□□□□ -1.83
CHD9-209ENST00000564255 DHX37Q8IY37 1157 aaKnown RBP3.64□□□□□ -1.83
CHD9-209ENST00000564255 WHAMMQ8TF30 809 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms