RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 USP14P54578 494 aa28.93■■■□□ 2.22
NME3-206ENST00000564252 EVX2Q03828 476 aa28.93■■■□□ 2.22
NME3-206ENST00000564252 CHRDL2Q6WN34 429 aa28.93■■■□□ 2.22
NME3-206ENST00000564252 ACER1Q8TDN7 264 aa28.93■■■□□ 2.22
NME3-206ENST00000564252 SOCS4Q8WXH5 440 aa28.93■■■□□ 2.22
NME3-206ENST00000564252 NUDT12Q9BQG2 462 aa28.93■■■□□ 2.22
NME3-206ENST00000564252 PAGR1Q9BTK6 254 aa28.93■■■□□ 2.22
NME3-206ENST00000564252 BCL11AQ9H165 835 aa28.93■■■□□ 2.22
NME3-206ENST00000564252 PORCNQ9H237 461 aa28.93■■■□□ 2.22
NME3-206ENST00000564252 CHMP4BQ9H444 224 aaKnown RBP28.93■■■□□ 2.22
NME3-206ENST00000564252 RPTORQ8N122 1335 aa28.93■■■□□ 2.22
NME3-206ENST00000564252 USP17L15C9J2P7 530 aa28.92■■■□□ 2.22
NME3-206ENST00000564252 USP17L13C9JLJ4 530 aa28.92■■■□□ 2.22
NME3-206ENST00000564252 USP17L11C9JVI0 530 aa28.92■■■□□ 2.22
NME3-206ENST00000564252 USP17L18D6R9N7 530 aa28.92■■■□□ 2.22
NME3-206ENST00000564252 USP17L22D6RA61 530 aa28.92■■■□□ 2.22
NME3-206ENST00000564252 USP17L17D6RBQ6 530 aa28.92■■■□□ 2.22
NME3-206ENST00000564252 USP17L19D6RCP7 530 aa28.92■■■□□ 2.22
NME3-206ENST00000564252 USP17L20D6RJB6 530 aa28.92■■■□□ 2.22
NME3-206ENST00000564252 CYP2B6P20813 491 aa28.92■■■□□ 2.22
NME3-206ENST00000564252 GUCY1A2P33402 732 aa28.92■■■□□ 2.22
NME3-206ENST00000564252 USP17L24Q0WX57 530 aa28.92■■■□□ 2.22
NME3-206ENST00000564252 LCORLQ8N3X6 602 aa28.92■■■□□ 2.22
NME3-206ENST00000564252 SDR42E1Q8WUS8 393 aa28.92■■■□□ 2.22
NME3-206ENST00000564252 HMX1Q9NP08 348 aaPredicted RBP28.92■■■□□ 2.22
NME3-206ENST00000564252 CABP5Q9NP86 173 aa28.92■■■□□ 2.22
NME3-206ENST00000564252 MCM9Q9NXL9 1143 aa28.92■■■□□ 2.22
NME3-206ENST00000564252 XRCC5P13010 732 aaKnown RBP28.91■■■□□ 2.22
NME3-206ENST00000564252 USP6NLQ92738 828 aa28.91■■■□□ 2.22
NME3-206ENST00000564252 DCP1AQ9NPI6 582 aaPredicted RBP28.91■■■□□ 2.22
NME3-206ENST00000564252 PAG1Q9NWQ8 432 aa28.91■■■□□ 2.22
NME3-206ENST00000564252 CNMDO75829 334 aa28.9■■■□□ 2.22
NME3-206ENST00000564252 VCAM1P19320 739 aa28.9■■■□□ 2.22
NME3-206ENST00000564252 MAP3K21Q5TCX8 1036 aa28.9■■■□□ 2.22
NME3-206ENST00000564252 CATSPERGQ6ZRH7 1159 aa28.9■■■□□ 2.22
NME3-206ENST00000564252 PAWRQ96IZ0 340 aaKnown RBP28.9■■■□□ 2.22
NME3-206ENST00000564252 BOLA2Q9H3K6 86 aa28.9■■■□□ 2.22
NME3-206ENST00000564252 NR2E3Q9Y5X4 410 aa28.9■■■□□ 2.22
NME3-206ENST00000564252 ATP5JP18859 108 aa28.89■■■□□ 2.22
NME3-206ENST00000564252 PDE3AQ14432 1141 aa28.89■■■□□ 2.22
NME3-206ENST00000564252 GPR142Q7Z601 462 aa28.89■■■□□ 2.22
NME3-206ENST00000564252 DIS3LQ8TF46 1054 aaKnown RBP28.89■■■□□ 2.22
NME3-206ENST00000564252 RABGAP1Q9Y3P9 1069 aa28.89■■■□□ 2.22
NME3-206ENST00000564252 SZT2Q5T011 3432 aa28.88■■■□□ 2.21
NME3-206ENST00000564252 ADD2P35612 726 aa28.88■■■□□ 2.21
NME3-206ENST00000564252 SEPT2Q15019 361 aa28.88■■■□□ 2.21
NME3-206ENST00000564252 MORN1Q5T089 497 aa28.88■■■□□ 2.21
NME3-206ENST00000564252 C20orf194Q5TEA3 1177 aa28.88■■■□□ 2.21
NME3-206ENST00000564252 PLEKHH3Q7Z736 793 aa28.88■■■□□ 2.21
NME3-206ENST00000564252 ANKLE1Q8NAG6 615 aa28.88■■■□□ 2.21
NME3-206ENST00000564252 ARMT1Q9H993 441 aa28.88■■■□□ 2.21
NME3-206ENST00000564252 ALPK3Q96L96 1907 aa28.88■■■□□ 2.21
NME3-206ENST00000564252 SLFNL1Q499Z3 407 aa28.87■■■□□ 2.21
NME3-206ENST00000564252 NECAB2Q7Z6G3 386 aa28.87■■■□□ 2.21
NME3-206ENST00000564252 CCAR1Q8IX12 1150 aaKnown RBP28.87■■■□□ 2.21
NME3-206ENST00000564252 HAUS7Q99871 368 aa28.87■■■□□ 2.21
NME3-206ENST00000564252 RBM27Q9P2N5 1060 aaKnown RBP28.87■■■□□ 2.21
NME3-206ENST00000564252 CYP2D6P10635 497 aa28.86■■■□□ 2.21
NME3-206ENST00000564252 PRKAR2AP13861 404 aaKnown RBP28.86■■■□□ 2.21
NME3-206ENST00000564252 LBX2Q6XYB7 198 aa28.86■■■□□ 2.21
NME3-206ENST00000564252 TRMT44Q8IYL2 757 aaKnown RBP28.86■■■□□ 2.21
NME3-206ENST00000564252 PRO3102Q9H379 93 aa28.86■■■□□ 2.21
NME3-206ENST00000564252 EVI5O60447 810 aa28.85■■■□□ 2.21
NME3-206ENST00000564252 RGS2P41220 211 aa28.85■■■□□ 2.21
NME3-206ENST00000564252 RPAP3Q9H6T3 665 aaPredicted RBP28.85■■■□□ 2.21
NME3-206ENST00000564252 A0A1W2PRG0 241 aa28.84■■■□□ 2.21
NME3-206ENST00000564252 MPHOSPH10O00566 681 aaKnown RBP28.84■■■□□ 2.21
NME3-206ENST00000564252 PRKAB2O43741 272 aa28.84■■■□□ 2.21
NME3-206ENST00000564252 MBD4O95243 580 aa28.84■■■□□ 2.21
NME3-206ENST00000564252 ZKSCAN1P17029 563 aaPredicted RBP28.84■■■□□ 2.21
NME3-206ENST00000564252 MNX1P50219 401 aaPredicted RBP28.84■■■□□ 2.21
NME3-206ENST00000564252 CCNA1P78396 465 aa28.84■■■□□ 2.21
NME3-206ENST00000564252 CCL14Q16627 93 aa28.84■■■□□ 2.21
NME3-206ENST00000564252 SLC44A5Q8NCS7 719 aa28.84■■■□□ 2.21
NME3-206ENST00000564252 MYH7P12883 1935 aa28.84■■■□□ 2.21
NME3-206ENST00000564252 SPDYE16A6NNV3 312 aaPredicted RBP28.83■■■□□ 2.21
NME3-206ENST00000564252 CHGBP05060 677 aa28.83■■■□□ 2.21
NME3-206ENST00000564252 CACNB2Q08289 660 aaPredicted RBP28.83■■■□□ 2.21
NME3-206ENST00000564252 APBA2Q99767 749 aa28.83■■■□□ 2.21
NME3-206ENST00000564252 LRRCC1Q9C099 1032 aa28.83■■■□□ 2.21
NME3-206ENST00000564252 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.83■■■□□ 2.215e-32■■■■□ 24.1
NME3-206ENST00000564252 ATP8A2Q9NTI2 1148 aa28.83■■■□□ 2.21
NME3-206ENST00000564252 BTBD7Q9P203 1132 aa28.83■■■□□ 2.21
NME3-206ENST00000564252 SWAP70Q9UH65 585 aa28.83■■■□□ 2.21
NME3-206ENST00000564252 OGDHLQ9ULD0 1010 aa28.83■■■□□ 2.21
NME3-206ENST00000564252 BAZ2AQ9UIF9 1905 aaKnown RBP28.82■■■□□ 2.2
NME3-206ENST00000564252 DYNLL2Q96FJ2 89 aa28.82■■■□□ 2.2
NME3-206ENST00000564252 CWC22Q9HCG8 908 aaKnown RBP28.82■■■□□ 2.2
NME3-206ENST00000564252 MYH8P13535 1937 aa28.82■■■□□ 2.2
NME3-206ENST00000564252 MAP2K5Q13163 448 aa28.81■■■□□ 2.2
NME3-206ENST00000564252 TMEM179Q6ZVK1 233 aa28.81■■■□□ 2.2
NME3-206ENST00000564252 SMARCA5O60264 1052 aaPredicted RBP28.8■■■□□ 2.2
NME3-206ENST00000564252 UBE3CQ15386 1083 aa28.8■■■□□ 2.2
NME3-206ENST00000564252 NBPF3Q9H094 633 aa28.8■■■□□ 2.2
NME3-206ENST00000564252 SMIM22K7EJ46 135 aa28.79■■■□□ 2.2
NME3-206ENST00000564252 GLRX3O76003 335 aaKnown RBP28.79■■■□□ 2.2
NME3-206ENST00000564252 PTPREP23469 700 aa28.79■■■□□ 2.2
NME3-206ENST00000564252 RLFQ13129 1914 aa28.79■■■□□ 2.2
NME3-206ENST00000564252 CYP2D7A0A087X1C5 515 aa28.78■■■□□ 2.2
NME3-206ENST00000564252 SLC15A5A6NIM6 579 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms