RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 DOCK2Q92608 1830 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 MED23Q9ULK4 1368 aa12.63□□□□□ -0.39
TCF4-222ENST00000564228 ZRSR1Q15695 479 aaKnown RBP12.62□□□□□ -0.39
TCF4-222ENST00000564228 MCTP2Q6DN12 878 aa12.62□□□□□ -0.39
TCF4-222ENST00000564228 MMS22LQ6ZRQ5 1243 aa12.62□□□□□ -0.39
TCF4-222ENST00000564228 SPATA5Q8NB90 893 aa12.62□□□□□ -0.39
TCF4-222ENST00000564228 MRPS27Q92552 414 aaKnown RBP12.62□□□□□ -0.39
TCF4-222ENST00000564228 GNL3LQ9NVN8 582 aaKnown RBP12.62□□□□□ -0.39
TCF4-222ENST00000564228 A0A0G2JLW4 131 aa12.62□□□□□ -0.39
TCF4-222ENST00000564228 VWA3AA6NCI4 1184 aa12.62□□□□□ -0.39
TCF4-222ENST00000564228 C6orf229H3BNL8 230 aa12.62□□□□□ -0.39
TCF4-222ENST00000564228 CHGBP05060 677 aa12.62□□□□□ -0.39
TCF4-222ENST00000564228 ATP2B4P23634 1241 aa12.62□□□□□ -0.39
TCF4-222ENST00000564228 GSCP56915 257 aaPredicted RBP12.62□□□□□ -0.39
TCF4-222ENST00000564228 NLRP12P59046 1061 aa12.62□□□□□ -0.39
TCF4-222ENST00000564228 NMIQ13287 307 aaPredicted RBP12.62□□□□□ -0.39
TCF4-222ENST00000564228 CNKSR1Q969H4 720 aa12.62□□□□□ -0.39
TCF4-222ENST00000564228 FAM227BQ96M60 508 aa12.62□□□□□ -0.39
TCF4-222ENST00000564228 KIAA1468Q9P260 1216 aa12.62□□□□□ -0.39
TCF4-222ENST00000564228 RAB21Q9UL25 225 aa12.62□□□□□ -0.39
TCF4-222ENST00000564228 LAMA4Q16363 1823 aa12.61□□□□□ -0.39
TCF4-222ENST00000564228 ERLIN1O75477 346 aa12.61□□□□□ -0.39
TCF4-222ENST00000564228 HIBADHP31937 336 aaKnown RBP12.61□□□□□ -0.39
TCF4-222ENST00000564228 FANCCQ00597 558 aa12.61□□□□□ -0.39
TCF4-222ENST00000564228 GNL2Q13823 731 aaKnown RBP12.61□□□□□ -0.39
TCF4-222ENST00000564228 TUBB2AQ13885 445 aa12.61□□□□□ -0.39
TCF4-222ENST00000564228 NCAPHQ15003 741 aa12.61□□□□□ -0.39
TCF4-222ENST00000564228 FAM71BQ8TC56 605 aa12.61□□□□□ -0.39
TCF4-222ENST00000564228 DDX11Q96FC9 970 aa12.61□□□□□ -0.39
TCF4-222ENST00000564228 TUBB2BQ9BVA1 445 aa12.61□□□□□ -0.39
TCF4-222ENST00000564228 VPS18Q9P253 973 aa12.61□□□□□ -0.39
TCF4-222ENST00000564228 POLLQ9UGP5 575 aa12.61□□□□□ -0.39
TCF4-222ENST00000564228 PPP2R2CQ9Y2T4 447 aa12.61□□□□□ -0.39
TCF4-222ENST00000564228 KIAA1551Q9HCM1 1747 aa12.61□□□□□ -0.39
TCF4-222ENST00000564228 A0A0D9SFI3 127 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 JAK2O60674 1132 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 TUBBP07437 444 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 DPEP1P16444 411 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 TTF1Q15361 905 aaPredicted RBP12.6□□□□□ -0.39
TCF4-222ENST00000564228 DPCR1Q3MIW9 517 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 BEND6Q5SZJ8 279 aaPredicted RBP12.6□□□□□ -0.39
TCF4-222ENST00000564228 MSANTD4Q8NCY6 345 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 TBC1D16Q8TBP0 767 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 KIFC2Q96AC6 838 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 DRC1Q96MC2 740 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 WWC3Q9ULE0 1092 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 CHD4Q14839 1912 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 CCDC88AQ3V6T2 1871 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 IRS2Q9Y4H2 1338 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 DUOX1Q9NRD9 1551 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 IDH1O75874 414 aaKnown RBP12.6□□□□□ -0.39
TCF4-222ENST00000564228 DPP8Q6V1X1 898 aaPredicted RBP12.6□□□□□ -0.39
TCF4-222ENST00000564228 FBXO33Q7Z6M2 555 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 RPAINQ86UA6 219 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 GBP3Q9H0R5 595 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 ACBD3Q9H3P7 528 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 PDE11AQ9HCR9 933 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 PIH1D3Q9NQM4 214 aaKnown RBP12.6□□□□□ -0.39
TCF4-222ENST00000564228 BRCA1P38398 1863 aaKnown RBP12.6□□□□□ -0.39
TCF4-222ENST00000564228 RFX7Q2KHR2 1363 aa12.6□□□□□ -0.39
TCF4-222ENST00000564228 COL1A1P02452 1464 aaPredicted RBP12.6□□□□□ -0.39
TCF4-222ENST00000564228 A0A087WUV0 522 aaPredicted RBP12.59□□□□□ -0.39
TCF4-222ENST00000564228 PPFIA4O75335 1185 aa12.59□□□□□ -0.39
TCF4-222ENST00000564228 ADALQ6DHV7 355 aa12.59□□□□□ -0.39
TCF4-222ENST00000564228 ZNF804AQ7Z570 1209 aa12.59□□□□□ -0.39
TCF4-222ENST00000564228 TMEM139Q8IV31 216 aa12.59□□□□□ -0.39
TCF4-222ENST00000564228 VSTM4Q8IW00 320 aa12.59□□□□□ -0.39
TCF4-222ENST00000564228 USP28Q96RU2 1077 aa12.59□□□□□ -0.39
TCF4-222ENST00000564228 SDF4Q9BRK5 362 aa12.59□□□□□ -0.39
TCF4-222ENST00000564228 MED4Q9NPJ6 270 aa12.59□□□□□ -0.39
TCF4-222ENST00000564228 RIMBP2O15034 1052 aa12.58□□□□□ -0.39
TCF4-222ENST00000564228 KIF1CO43896 1103 aaKnown RBP12.58□□□□□ -0.39
TCF4-222ENST00000564228 CCDC172P0C7W6 258 aa12.58□□□□□ -0.39
TCF4-222ENST00000564228 GNG11P61952 73 aa12.58□□□□□ -0.39
TCF4-222ENST00000564228 WASHC4Q2M389 1173 aa12.58□□□□□ -0.39
TCF4-222ENST00000564228 SRGAP1Q7Z6B7 1085 aa12.58□□□□□ -0.39
TCF4-222ENST00000564228 TTLL6Q8N841 843 aa12.58□□□□□ -0.39
TCF4-222ENST00000564228 SEC62Q99442 399 aaKnown RBP12.58□□□□□ -0.39
TCF4-222ENST00000564228 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.58□□□□□ -0.392e-6■■■■■ 33.9
TCF4-222ENST00000564228 EPC1Q9H2F5 836 aa12.58□□□□□ -0.39
TCF4-222ENST00000564228 ABCF2Q9UG63 623 aa12.58□□□□□ -0.39
TCF4-222ENST00000564228 DENND2AQ9ULE3 1009 aa12.58□□□□□ -0.39
TCF4-222ENST00000564228 JAG2Q9Y219 1238 aa12.58□□□□□ -0.39
TCF4-222ENST00000564228 CEP83Q9Y592 693 aa12.58□□□□□ -0.39
TCF4-222ENST00000564228 NEDD4P46934 1319 aa12.58□□□□□ -0.4
TCF4-222ENST00000564228 RNF113AO15541 343 aaKnown RBP12.58□□□□□ -0.4
TCF4-222ENST00000564228 STX10O60499 249 aa12.58□□□□□ -0.4
TCF4-222ENST00000564228 PFKFB2O60825 505 aa12.58□□□□□ -0.4
TCF4-222ENST00000564228 ME1P48163 572 aa12.58□□□□□ -0.4
TCF4-222ENST00000564228 STK3Q13188 491 aa12.58□□□□□ -0.4
TCF4-222ENST00000564228 LRRC31Q6UY01 552 aa12.58□□□□□ -0.4
TCF4-222ENST00000564228 TADA2BQ86TJ2 420 aa12.58□□□□□ -0.4
TCF4-222ENST00000564228 CEP112Q8N8E3 955 aa12.58□□□□□ -0.4
TCF4-222ENST00000564228 CHMP4CQ96CF2 233 aa12.58□□□□□ -0.4
TCF4-222ENST00000564228 SGIP1Q9BQI5 828 aa12.58□□□□□ -0.4
TCF4-222ENST00000564228 RTEL1Q9NZ71 1219 aa12.58□□□□□ -0.4
TCF4-222ENST00000564228 A0A087WWV3 80 aa12.57□□□□□ -0.4
TCF4-222ENST00000564228 SEMA3EO15041 775 aa12.57□□□□□ -0.4
TCF4-222ENST00000564228 C21orf2O43822 256 aa12.57□□□□□ -0.4
TCF4-222ENST00000564228 KCNA3P22001 575 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms