RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 ROBO3Q96MS0 1386 aa17.77■□□□□ 0.44
SNX29-203ENST00000564111 C16orf86Q6ZW13 317 aa17.77■□□□□ 0.44
SNX29-203ENST00000564111 TRMT44Q8IYL2 757 aaKnown RBP17.77■□□□□ 0.44
SNX29-203ENST00000564111 NACAP1Q9BZK3 213 aa17.77■□□□□ 0.44
SNX29-203ENST00000564111 HERVK_113P62684 666 aa17.76■□□□□ 0.43
SNX29-203ENST00000564111 CCNA1P78396 465 aa17.76■□□□□ 0.43
SNX29-203ENST00000564111 SLC4A8Q2Y0W8 1093 aa17.76■□□□□ 0.43
SNX29-203ENST00000564111 ANKRD13CQ8N6S4 541 aa17.76■□□□□ 0.43
SNX29-203ENST00000564111 LPAR1Q92633 364 aa17.76■□□□□ 0.43
SNX29-203ENST00000564111 STAP2Q9UGK3 403 aa17.76■□□□□ 0.43
SNX29-203ENST00000564111 MPHOSPH10O00566 681 aaKnown RBP17.76■□□□□ 0.43
SNX29-203ENST00000564111 MAPK4P31152 587 aa17.76■□□□□ 0.43
SNX29-203ENST00000564111 GPRC5AQ8NFJ5 357 aa17.76■□□□□ 0.43
SNX29-203ENST00000564111 PI4K2BQ8TCG2 481 aa17.76■□□□□ 0.43
SNX29-203ENST00000564111 SOCS4Q8WXH5 440 aa17.76■□□□□ 0.43
SNX29-203ENST00000564111 STRBPQ96SI9 672 aaKnown RBP17.76■□□□□ 0.43
SNX29-203ENST00000564111 FSD1Q9BTV5 496 aa17.76■□□□□ 0.43
SNX29-203ENST00000564111 GREB1LQ9C091 1923 aaPredicted RBP17.76■□□□□ 0.43
SNX29-203ENST00000564111 ANKRD45Q5TZF3 282 aa17.75■□□□□ 0.43
SNX29-203ENST00000564111 LBX2Q6XYB7 198 aa17.75■□□□□ 0.43
SNX29-203ENST00000564111 JAG1P78504 1218 aa17.75■□□□□ 0.43
SNX29-203ENST00000564111 CAP1Q01518 475 aa17.75■□□□□ 0.43
SNX29-203ENST00000564111 PPP4R3BQ5MIZ7 849 aa17.75■□□□□ 0.43
SNX29-203ENST00000564111 EMILIN3Q9NT22 766 aa17.75■□□□□ 0.43
SNX29-203ENST00000564111 RABGAP1Q9Y3P9 1069 aa17.75■□□□□ 0.43
SNX29-203ENST00000564111 A0A0G2JMZ2 1700 aa17.75■□□□□ 0.43
SNX29-203ENST00000564111 SALL3Q9BXA9 1300 aa17.74■□□□□ 0.43
SNX29-203ENST00000564111 SLC3A2P08195 630 aaKnown RBP17.74■□□□□ 0.43
SNX29-203ENST00000564111 PRKCZQ05513 592 aa17.74■□□□□ 0.43
SNX29-203ENST00000564111 EVI5LQ96CN4 794 aa17.74■□□□□ 0.43
SNX29-203ENST00000564111 PUS7LQ9H0K6 701 aaKnown RBP17.74■□□□□ 0.43
SNX29-203ENST00000564111 USP17L12C9JPN9 530 aa17.74■□□□□ 0.43
SNX29-203ENST00000564111 USP17L21D6R901 530 aa17.74■□□□□ 0.43
SNX29-203ENST00000564111 CCAR1Q8IX12 1150 aaKnown RBP17.74■□□□□ 0.43
SNX29-203ENST00000564111 GPAA1O43292 621 aa17.73■□□□□ 0.43
SNX29-203ENST00000564111 PRKAB2O43741 272 aa17.73■□□□□ 0.43
SNX29-203ENST00000564111 CTGFP29279 349 aa17.73■□□□□ 0.43
SNX29-203ENST00000564111 CDK8P49336 464 aa17.73■□□□□ 0.43
SNX29-203ENST00000564111 ZNF236Q9UL36 1845 aa17.73■□□□□ 0.43
SNX29-203ENST00000564111 ADCY3O60266 1144 aa17.72■□□□□ 0.43
SNX29-203ENST00000564111 VCAM1P19320 739 aa17.72■□□□□ 0.43
SNX29-203ENST00000564111 TDO2P48775 406 aa17.72■□□□□ 0.43
SNX29-203ENST00000564111 ICA1Q05084 483 aa17.72■□□□□ 0.43
SNX29-203ENST00000564111 SEPT2Q15019 361 aa17.72■□□□□ 0.43
SNX29-203ENST00000564111 PRPF38BQ5VTL8 546 aaKnown RBP17.72■□□□□ 0.43
SNX29-203ENST00000564111 CTR9Q6PD62 1173 aa17.72■□□□□ 0.43
SNX29-203ENST00000564111 CATSPERGQ6ZRH7 1159 aa17.72■□□□□ 0.43
SNX29-203ENST00000564111 P2RX7Q99572 595 aaKnown RBP17.72■□□□□ 0.43
SNX29-203ENST00000564111 KANSL2Q9H9L4 492 aa17.72■□□□□ 0.43
SNX29-203ENST00000564111 CWC22Q9HCG8 908 aaKnown RBP17.72■□□□□ 0.43
SNX29-203ENST00000564111 BIN2Q9UBW5 565 aaPredicted RBP17.72■□□□□ 0.43
SNX29-203ENST00000564111 SYNPO2Q9UMS6 1093 aa17.72■□□□□ 0.43
SNX29-203ENST00000564111 CYP2D6P10635 497 aa17.72■□□□□ 0.43
SNX29-203ENST00000564111 SMC5Q8IY18 1101 aa17.72■□□□□ 0.43
SNX29-203ENST00000564111 MB21D1Q8N884 522 aa17.72■□□□□ 0.43
SNX29-203ENST00000564111 PATL2C9JE40 543 aaKnown RBP17.71■□□□□ 0.43
SNX29-203ENST00000564111 GUCY1A2P33402 732 aa17.71■□□□□ 0.43
SNX29-203ENST00000564111 FLT3LGP49771 235 aa17.71■□□□□ 0.43
SNX29-203ENST00000564111 ERVK-9P63128 1117 aa17.71■□□□□ 0.43
SNX29-203ENST00000564111 ERVK-24P63145 666 aa17.71■□□□□ 0.43
SNX29-203ENST00000564111 ZMYM1Q5SVZ6 1142 aa17.71■□□□□ 0.43
SNX29-203ENST00000564111 SH3TC2Q8TF17 1288 aa17.71■□□□□ 0.43
SNX29-203ENST00000564111 GOPCQ9HD26 462 aa17.71■□□□□ 0.43
SNX29-203ENST00000564111 PLXNB2O15031 1838 aa17.71■□□□□ 0.43
SNX29-203ENST00000564111 OSBP2Q969R2 916 aa17.71■□□□□ 0.43
SNX29-203ENST00000564111 HOXC10Q9NYD6 342 aa17.71■□□□□ 0.43
SNX29-203ENST00000564111 TMX2Q9Y320 296 aa17.71■□□□□ 0.43
SNX29-203ENST00000564111 GSG1L2A8MUP6 293 aa17.7■□□□□ 0.42
SNX29-203ENST00000564111 WDR46O15213 610 aaKnown RBP17.7■□□□□ 0.42
SNX29-203ENST00000564111 NUDT12Q9BQG2 462 aa17.7■□□□□ 0.42
SNX29-203ENST00000564111 RPAP3Q9H6T3 665 aaPredicted RBP17.7■□□□□ 0.42
SNX29-203ENST00000564111 HMGCRP04035 888 aa17.7■□□□□ 0.42
SNX29-203ENST00000564111 XRCC5P13010 732 aaKnown RBP17.7■□□□□ 0.42
SNX29-203ENST00000564111 PDE1AP54750 535 aa17.7■□□□□ 0.42
SNX29-203ENST00000564111 SHROOM1Q2M3G4 852 aaPredicted RBP17.7■□□□□ 0.42
SNX29-203ENST00000564111 TSHZ3Q63HK5 1081 aa17.7■□□□□ 0.42
SNX29-203ENST00000564111 ACER1Q8TDN7 264 aa17.7■□□□□ 0.42
SNX29-203ENST00000564111 DYNLL2Q96FJ2 89 aa17.7■□□□□ 0.42
SNX29-203ENST00000564111 MKNK2Q9HBH9 465 aa17.7■□□□□ 0.42
SNX29-203ENST00000564111 HELLSQ9NRZ9 838 aa17.7■□□□□ 0.42
SNX29-203ENST00000564111 PARP14Q460N5 1801 aa17.7■□□□□ 0.42
SNX29-203ENST00000564111 POTEFA5A3E0 1075 aa17.69■□□□□ 0.42
SNX29-203ENST00000564111 APPP05067 770 aa17.69■□□□□ 0.42
SNX29-203ENST00000564111 GJB1P08034 283 aa17.69■□□□□ 0.42
SNX29-203ENST00000564111 CCL5P13501 91 aa17.69■□□□□ 0.42
SNX29-203ENST00000564111 AKR1B1P15121 316 aa17.69■□□□□ 0.42
SNX29-203ENST00000564111 PDE4BQ07343 736 aa17.69■□□□□ 0.42
SNX29-203ENST00000564111 ZYXQ15942 572 aaKnown RBP17.69■□□□□ 0.42
SNX29-203ENST00000564111 VCPKMTQ9H867 229 aa17.69■□□□□ 0.42
SNX29-203ENST00000564111 GABRQQ9UN88 632 aa17.69■□□□□ 0.42
SNX29-203ENST00000564111 COPB2P35606 906 aa17.68■□□□□ 0.42
SNX29-203ENST00000564111 RGS2P41220 211 aa17.68■□□□□ 0.42
SNX29-203ENST00000564111 MFAP1P55081 439 aaKnown RBP17.68■□□□□ 0.42
SNX29-203ENST00000564111 PLEKHH3Q7Z736 793 aa17.68■□□□□ 0.42
SNX29-203ENST00000564111 SLC44A5Q8NCS7 719 aa17.68■□□□□ 0.42
SNX29-203ENST00000564111 NAPBQ9H115 298 aa17.68■□□□□ 0.42
SNX29-203ENST00000564111 PLIN4Q96Q06 1357 aa17.68■□□□□ 0.42
SNX29-203ENST00000564111 M0R2C6 588 aa17.68■□□□□ 0.42
SNX29-203ENST00000564111 COG2Q14746 738 aa17.68■□□□□ 0.42
SNX29-203ENST00000564111 SHCBP1Q8NEM2 672 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms