RNA–Protein interactions for RNA: ENST00000563662.2

VAC14-204, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 554 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-204ENST00000563662 USP17L17D6RBQ6 530 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 USP17L19D6RCP7 530 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 USP17L20D6RJB6 530 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 MBD4O95243 580 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 GNAT2P19087 354 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 GABPAQ06546 454 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 USP17L24Q0WX57 530 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 IRF5Q13568 498 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 GIMAP6Q6P9H5 292 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 LCORLQ8N3X6 602 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 KBTBD3Q8NAB2 608 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 GPRC5AQ8NFJ5 357 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 EDC3Q96F86 508 aaKnown RBP12.09□□□□□ -0.47
VAC14-204ENST00000563662 C12orf42Q96LP6 360 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 YTHDC1Q96MU7 727 aaKnown RBP12.09□□□□□ -0.47
VAC14-204ENST00000563662 KIAA1683Q9H0B3 1180 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 SH2D4AQ9H788 454 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 ZNF287Q9HBT7 754 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.09□□□□□ -0.47
VAC14-204ENST00000563662 PCDHB15Q9Y5E8 787 aa12.09□□□□□ -0.47
VAC14-204ENST00000563662 MPHOSPH10O00566 681 aaKnown RBP12.08□□□□□ -0.48
VAC14-204ENST00000563662 RNF113AO15541 343 aaKnown RBP12.08□□□□□ -0.48
VAC14-204ENST00000563662 CCNA1P78396 465 aa12.08□□□□□ -0.48
VAC14-204ENST00000563662 CAP1Q01518 475 aa12.08□□□□□ -0.48
VAC14-204ENST00000563662 PRKCZQ05513 592 aa12.08□□□□□ -0.48
VAC14-204ENST00000563662 HDAC1Q13547 482 aaPredicted RBP12.08□□□□□ -0.48
VAC14-204ENST00000563662 TMEM179Q6ZVK1 233 aa12.08□□□□□ -0.48
VAC14-204ENST00000563662 TICAM2Q86XR7 235 aa12.08□□□□□ -0.48
VAC14-204ENST00000563662 SH3TC2Q8TF17 1288 aa12.08□□□□□ -0.48
VAC14-204ENST00000563662 SDR42E1Q8WUS8 393 aa12.08□□□□□ -0.48
VAC14-204ENST00000563662 P2RX7Q99572 595 aaKnown RBP12.08□□□□□ -0.48
VAC14-204ENST00000563662 HOXC10Q9NYD6 342 aa12.08□□□□□ -0.48
VAC14-204ENST00000563662 MORF4L1Q9UBU8 362 aa12.08□□□□□ -0.48
VAC14-204ENST00000563662 SLC4A4Q9Y6R1 1079 aa12.08□□□□□ -0.48
VAC14-204ENST00000563662 MYH2Q9UKX2 1941 aa12.07□□□□□ -0.48
VAC14-204ENST00000563662 ADCY3O60266 1144 aa12.07□□□□□ -0.48
VAC14-204ENST00000563662 MAPK4P31152 587 aa12.07□□□□□ -0.48
VAC14-204ENST00000563662 SHMT1P34896 483 aa12.07□□□□□ -0.48
VAC14-204ENST00000563662 FLT3LGP49771 235 aa12.07□□□□□ -0.48
VAC14-204ENST00000563662 HERVK_113P62684 666 aa12.07□□□□□ -0.48
VAC14-204ENST00000563662 ANKRD45Q5TZF3 282 aa12.07□□□□□ -0.48
VAC14-204ENST00000563662 C12orf60Q5U649 245 aa12.07□□□□□ -0.48
VAC14-204ENST00000563662 APPBP2Q92624 585 aa12.07□□□□□ -0.48
VAC14-204ENST00000563662 NACAP1Q9BZK3 213 aa12.07□□□□□ -0.48
VAC14-204ENST00000563662 RWDD1Q9H446 243 aaPredicted RBP12.07□□□□□ -0.48
VAC14-204ENST00000563662 ARHGEF10LQ9HCE6 1279 aa12.07□□□□□ -0.48
VAC14-204ENST00000563662 EMILIN3Q9NT22 766 aa12.07□□□□□ -0.48
VAC14-204ENST00000563662 ARPP21Q9UBL0 812 aaPredicted RBP12.07□□□□□ -0.48
VAC14-204ENST00000563662 MYH13Q9UKX3 1938 aa12.06□□□□□ -0.48
VAC14-204ENST00000563662 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.06□□□□□ -0.48
VAC14-204ENST00000563662 USP17L12C9JPN9 530 aa12.06□□□□□ -0.48
VAC14-204ENST00000563662 USP17L21D6R901 530 aa12.06□□□□□ -0.48
VAC14-204ENST00000563662 CTGFP29279 349 aa12.06□□□□□ -0.48
VAC14-204ENST00000563662 JAG1P78504 1218 aa12.06□□□□□ -0.48
VAC14-204ENST00000563662 TRMT44Q8IYL2 757 aaKnown RBP12.06□□□□□ -0.48
VAC14-204ENST00000563662 ZFP91Q96JP5 570 aaPredicted RBP12.06□□□□□ -0.48
VAC14-204ENST00000563662 STRBPQ96SI9 672 aaKnown RBP12.06□□□□□ -0.48
VAC14-204ENST00000563662 CWC22Q9HCG8 908 aaKnown RBP12.06□□□□□ -0.48
VAC14-204ENST00000563662 RABGAP1Q9Y3P9 1069 aa12.06□□□□□ -0.48
VAC14-204ENST00000563662 POTEFA5A3E0 1075 aa12.05□□□□□ -0.48
VAC14-204ENST00000563662 PRKAB2O43741 272 aa12.05□□□□□ -0.48
VAC14-204ENST00000563662 GJB1P08034 283 aa12.05□□□□□ -0.48
VAC14-204ENST00000563662 EN2P19622 333 aaPredicted RBP12.05□□□□□ -0.48
VAC14-204ENST00000563662 MX1P20591 662 aa12.05□□□□□ -0.48
VAC14-204ENST00000563662 SEPT2Q15019 361 aa12.05□□□□□ -0.48
VAC14-204ENST00000563662 SBK1Q52WX2 424 aa12.05□□□□□ -0.48
VAC14-204ENST00000563662 PRPF38BQ5VTL8 546 aaKnown RBP12.05□□□□□ -0.48
VAC14-204ENST00000563662 CATSPERGQ6ZRH7 1159 aa12.05□□□□□ -0.48
VAC14-204ENST00000563662 SOCS4Q8WXH5 440 aa12.05□□□□□ -0.48
VAC14-204ENST00000563662 LPAR1Q92633 364 aa12.05□□□□□ -0.48
VAC14-204ENST00000563662 MS4A3Q96HJ5 214 aa12.05□□□□□ -0.48
VAC14-204ENST00000563662 CRBNQ96SW2 442 aa12.05□□□□□ -0.48
VAC14-204ENST00000563662 PUS7LQ9H0K6 701 aaKnown RBP12.05□□□□□ -0.48
VAC14-204ENST00000563662 RNF208Q9H0X6 261 aa12.05□□□□□ -0.48
VAC14-204ENST00000563662 KANSL2Q9H9L4 492 aa12.05□□□□□ -0.48
VAC14-204ENST00000563662 MKNK2Q9HBH9 465 aa12.05□□□□□ -0.48
VAC14-204ENST00000563662 PATL2C9JE40 543 aaKnown RBP12.04□□□□□ -0.48
VAC14-204ENST00000563662 APPP05067 770 aa12.04□□□□□ -0.48
VAC14-204ENST00000563662 SLC3A2P08195 630 aaKnown RBP12.04□□□□□ -0.48
VAC14-204ENST00000563662 XRCC5P13010 732 aaKnown RBP12.04□□□□□ -0.48
VAC14-204ENST00000563662 CCL5P13501 91 aa12.04□□□□□ -0.48
VAC14-204ENST00000563662 GJA8P48165 433 aa12.04□□□□□ -0.48
VAC14-204ENST00000563662 CDK8P49336 464 aa12.04□□□□□ -0.48
VAC14-204ENST00000563662 ERVK-9P63128 1117 aa12.04□□□□□ -0.48
VAC14-204ENST00000563662 ERVK-24P63145 666 aa12.04□□□□□ -0.48
VAC14-204ENST00000563662 COG2Q14746 738 aa12.04□□□□□ -0.48
VAC14-204ENST00000563662 CTR9Q6PD62 1173 aa12.04□□□□□ -0.48
VAC14-204ENST00000563662 LBX2Q6XYB7 198 aa12.04□□□□□ -0.48
VAC14-204ENST00000563662 C16orf86Q6ZW13 317 aa12.04□□□□□ -0.48
VAC14-204ENST00000563662 NUDT12Q9BQG2 462 aa12.04□□□□□ -0.48
VAC14-204ENST00000563662 RBPJLQ9UBG7 517 aa12.04□□□□□ -0.48
VAC14-204ENST00000563662 GABRQQ9UN88 632 aa12.04□□□□□ -0.48
VAC14-204ENST00000563662 OTOFQ9HC10 1997 aa12.03□□□□□ -0.48
VAC14-204ENST00000563662 STK25O00506 426 aa12.03□□□□□ -0.48
VAC14-204ENST00000563662 MYCP01106 439 aaPredicted RBP12.03□□□□□ -0.48
VAC14-204ENST00000563662 VCAM1P19320 739 aa12.03□□□□□ -0.48
VAC14-204ENST00000563662 ICA1Q05084 483 aa12.03□□□□□ -0.48
VAC14-204ENST00000563662 ZYXQ15942 572 aaKnown RBP12.03□□□□□ -0.48
VAC14-204ENST00000563662 PLEKHH3Q7Z736 793 aa12.03□□□□□ -0.48
VAC14-204ENST00000563662 ZNF444Q8N0Y2 327 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms