RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 MCM9Q9NXL9 1143 aa8.39□□□□□ -1.07
CDH11-208ENST00000563492 BTBD7Q9P203 1132 aa8.39□□□□□ -1.07
CDH11-208ENST00000563492 PTPRFP10586 1907 aa8.39□□□□□ -1.07
CDH11-208ENST00000563492 DOCK3Q8IZD9 2030 aa8.38□□□□□ -1.07
CDH11-208ENST00000563492 EVI5O60447 810 aa8.38□□□□□ -1.07
CDH11-208ENST00000563492 IFIT2P09913 472 aaKnown RBP8.38□□□□□ -1.07
CDH11-208ENST00000563492 PRKAR2AP13861 404 aaKnown RBP8.38□□□□□ -1.07
CDH11-208ENST00000563492 VCAM1P19320 739 aa8.38□□□□□ -1.07
CDH11-208ENST00000563492 CCND3P30281 292 aaPredicted RBP8.38□□□□□ -1.07
CDH11-208ENST00000563492 CACNB2Q08289 660 aaPredicted RBP8.38□□□□□ -1.07
CDH11-208ENST00000563492 HSP90AB4PQ58FF6 505 aa8.38□□□□□ -1.07
CDH11-208ENST00000563492 MORN1Q5T089 497 aa8.38□□□□□ -1.07
CDH11-208ENST00000563492 CATSPERGQ6ZRH7 1159 aa8.38□□□□□ -1.07
CDH11-208ENST00000563492 GPR142Q7Z601 462 aa8.38□□□□□ -1.07
CDH11-208ENST00000563492 TTC6Q86TZ1 520 aa8.38□□□□□ -1.07
CDH11-208ENST00000563492 SIAH1Q8IUQ4 282 aa8.38□□□□□ -1.07
CDH11-208ENST00000563492 HTATIP2Q9BUP3 242 aa8.38□□□□□ -1.07
CDH11-208ENST00000563492 KIAA1683Q9H0B3 1180 aa8.38□□□□□ -1.07
CDH11-208ENST00000563492 HMX1Q9NP08 348 aaPredicted RBP8.38□□□□□ -1.07
CDH11-208ENST00000563492 DCP1AQ9NPI6 582 aaPredicted RBP8.38□□□□□ -1.07
CDH11-208ENST00000563492 GINM1Q9NU53 330 aa8.38□□□□□ -1.07
CDH11-208ENST00000563492 FLRT1Q9NZU1 646 aa8.38□□□□□ -1.07
CDH11-208ENST00000563492 STAP2Q9UGK3 403 aa8.38□□□□□ -1.07
CDH11-208ENST00000563492 RCAN3Q9UKA8 241 aa8.38□□□□□ -1.07
CDH11-208ENST00000563492 DDX19BQ9UMR2 479 aa8.38□□□□□ -1.07
CDH11-208ENST00000563492 MYO5AQ9Y4I1 1855 aaKnown RBP8.38□□□□□ -1.07
CDH11-208ENST00000563492 RPTORQ8N122 1335 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 USP17L15C9J2P7 530 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 USP17L13C9JLJ4 530 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 USP17L11C9JVI0 530 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 USP17L18D6R9N7 530 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 USP17L22D6RA61 530 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 USP17L17D6RBQ6 530 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 USP17L19D6RCP7 530 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 USP17L20D6RJB6 530 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 MPHOSPH10O00566 681 aaKnown RBP8.37□□□□□ -1.07
CDH11-208ENST00000563492 SOX1O00570 391 aaPredicted RBP8.37□□□□□ -1.07
CDH11-208ENST00000563492 MBD4O95243 580 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 ADD2P35612 726 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 USP17L24Q0WX57 530 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 MAP3K21Q5TCX8 1036 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 TSHZ3Q63HK5 1081 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 PLEKHH3Q7Z736 793 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 C12orf42Q96LP6 360 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 NUDT12Q9BQG2 462 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 CRNKL1Q9BZJ0 848 aaKnown RBP8.37□□□□□ -1.07
CDH11-208ENST00000563492 RPAP3Q9H6T3 665 aaPredicted RBP8.37□□□□□ -1.07
CDH11-208ENST00000563492 PAG1Q9NWQ8 432 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 ZMYND8Q9ULU4 1186 aaPredicted RBP8.37□□□□□ -1.07
CDH11-208ENST00000563492 SZT2Q5T011 3432 aa8.37□□□□□ -1.07
CDH11-208ENST00000563492 SPDYE16A6NNV3 312 aaPredicted RBP8.36□□□□□ -1.07
CDH11-208ENST00000563492 USP17L12C9JPN9 530 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 USP17L21D6R901 530 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 IGSF3O75054 1194 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 RAB11FIP3O75154 756 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 XRCC5P13010 732 aaKnown RBP8.36□□□□□ -1.07
CDH11-208ENST00000563492 AKR1B1P15121 316 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 SYN1P17600 705 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 ATP5JP18859 108 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 MAPK4P31152 587 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 TTF1Q15361 905 aaPredicted RBP8.36□□□□□ -1.07
CDH11-208ENST00000563492 WDR78Q5VTH9 848 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 LHX8Q68G74 356 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 NECAB2Q7Z6G3 386 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 CCAR1Q8IX12 1150 aaKnown RBP8.36□□□□□ -1.07
CDH11-208ENST00000563492 C7orf61Q8IZ16 206 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 SPICE1Q8N0Z3 855 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 NPLOC4Q8TAT6 608 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.36□□□□□ -1.07
CDH11-208ENST00000563492 HAUS7Q99871 368 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 CABP5Q9NP86 173 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 OGDHLQ9ULD0 1010 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 RABGAP1Q9Y3P9 1069 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 NR2E3Q9Y5X4 410 aa8.36□□□□□ -1.07
CDH11-208ENST00000563492 LOC285556D6RIA3 1793 aa8.35□□□□□ -1.07
CDH11-208ENST00000563492 PFASO15067 1338 aa8.35□□□□□ -1.07
CDH11-208ENST00000563492 HMMRO75330 724 aa8.35□□□□□ -1.07
CDH11-208ENST00000563492 MS4A1P11836 297 aa8.35□□□□□ -1.07
CDH11-208ENST00000563492 ZKSCAN1P17029 563 aaPredicted RBP8.35□□□□□ -1.07
CDH11-208ENST00000563492 PTPREP23469 700 aa8.35□□□□□ -1.07
CDH11-208ENST00000563492 CYP2C19P33261 490 aa8.35□□□□□ -1.07
CDH11-208ENST00000563492 MAP2K5Q13163 448 aa8.35□□□□□ -1.07
CDH11-208ENST00000563492 PDE3AQ14432 1141 aa8.35□□□□□ -1.07
CDH11-208ENST00000563492 SAMD1Q6SPF0 538 aaPredicted RBP8.35□□□□□ -1.07
CDH11-208ENST00000563492 CERS3Q8IU89 383 aa8.35□□□□□ -1.07
CDH11-208ENST00000563492 STK11IPQ8N1F8 1099 aa8.35□□□□□ -1.07
CDH11-208ENST00000563492 TRPV1Q8NER1 839 aa8.35□□□□□ -1.07
CDH11-208ENST00000563492 SOCS4Q8WXH5 440 aa8.35□□□□□ -1.07
CDH11-208ENST00000563492 LRCH3Q96II8 777 aa8.35□□□□□ -1.07
CDH11-208ENST00000563492 NBPF3Q9H094 633 aa8.35□□□□□ -1.07
CDH11-208ENST00000563492 PUS7LQ9H0K6 701 aaKnown RBP8.35□□□□□ -1.07
CDH11-208ENST00000563492 MGAMO43451 1857 aa8.34□□□□□ -1.07
CDH11-208ENST00000563492 COBLO75128 1261 aa8.34□□□□□ -1.07
CDH11-208ENST00000563492 RGS2P41220 211 aa8.34□□□□□ -1.07
CDH11-208ENST00000563492 CDK8P49336 464 aa8.34□□□□□ -1.07
CDH11-208ENST00000563492 USP14P54578 494 aa8.34□□□□□ -1.07
CDH11-208ENST00000563492 COG2Q14746 738 aa8.34□□□□□ -1.07
CDH11-208ENST00000563492 C12orf60Q5U649 245 aa8.34□□□□□ -1.07
CDH11-208ENST00000563492 CTR9Q6PD62 1173 aa8.34□□□□□ -1.07
CDH11-208ENST00000563492 LBX2Q6XYB7 198 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms