RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 DIS3LQ8TF46 1054 aaKnown RBP25.43■■□□□ 1.66
CHD9-208ENST00000563410 GTF3C2Q8WUA4 911 aaPredicted RBP25.43■■□□□ 1.66
CHD9-208ENST00000563410 PAWRQ96IZ0 340 aaKnown RBP25.43■■□□□ 1.66
CHD9-208ENST00000563410 NUDT12Q9BQG2 462 aa25.43■■□□□ 1.66
CHD9-208ENST00000563410 PAGR1Q9BTK6 254 aa25.43■■□□□ 1.66
CHD9-208ENST00000563410 HMX1Q9NP08 348 aaPredicted RBP25.43■■□□□ 1.66
CHD9-208ENST00000563410 RBM27Q9P2N5 1060 aaKnown RBP25.43■■□□□ 1.66
CHD9-208ENST00000563410 IFIT2P09913 472 aaKnown RBP25.42■■□□□ 1.66
CHD9-208ENST00000563410 MAPK4P31152 587 aa25.42■■□□□ 1.66
CHD9-208ENST00000563410 GUCY1A2P33402 732 aa25.42■■□□□ 1.66
CHD9-208ENST00000563410 SOCS4Q8WXH5 440 aa25.42■■□□□ 1.66
CHD9-208ENST00000563410 USP6NLQ92738 828 aa25.42■■□□□ 1.66
CHD9-208ENST00000563410 EDC3Q96F86 508 aaKnown RBP25.42■■□□□ 1.66
CHD9-208ENST00000563410 DNAJC2Q99543 621 aaKnown RBP25.42■■□□□ 1.66
CHD9-208ENST00000563410 FEZ1Q99689 392 aa25.42■■□□□ 1.66
CHD9-208ENST00000563410 KIAA1683Q9H0B3 1180 aa25.42■■□□□ 1.66
CHD9-208ENST00000563410 PRO3102Q9H379 93 aa25.42■■□□□ 1.66
CHD9-208ENST00000563410 NR2E3Q9Y5X4 410 aa25.42■■□□□ 1.66
CHD9-208ENST00000563410 USP17L15C9J2P7 530 aa25.41■■□□□ 1.66
CHD9-208ENST00000563410 USP17L13C9JLJ4 530 aa25.41■■□□□ 1.66
CHD9-208ENST00000563410 USP17L11C9JVI0 530 aa25.41■■□□□ 1.66
CHD9-208ENST00000563410 USP17L18D6R9N7 530 aa25.41■■□□□ 1.66
CHD9-208ENST00000563410 USP17L22D6RA61 530 aa25.41■■□□□ 1.66
CHD9-208ENST00000563410 USP17L17D6RBQ6 530 aa25.41■■□□□ 1.66
CHD9-208ENST00000563410 USP17L19D6RCP7 530 aa25.41■■□□□ 1.66
CHD9-208ENST00000563410 USP17L20D6RJB6 530 aa25.41■■□□□ 1.66
CHD9-208ENST00000563410 CNMDO75829 334 aa25.41■■□□□ 1.66
CHD9-208ENST00000563410 POLR3DP05423 398 aaPredicted RBP25.41■■□□□ 1.66
CHD9-208ENST00000563410 XRCC5P13010 732 aaKnown RBP25.41■■□□□ 1.66
CHD9-208ENST00000563410 USP17L24Q0WX57 530 aa25.41■■□□□ 1.66
CHD9-208ENST00000563410 MAP3K21Q5TCX8 1036 aa25.41■■□□□ 1.66
CHD9-208ENST00000563410 GPR142Q7Z601 462 aa25.41■■□□□ 1.66
CHD9-208ENST00000563410 CRNKL1Q9BZJ0 848 aaKnown RBP25.41■■□□□ 1.66
CHD9-208ENST00000563410 RAB11FIP3O75154 756 aa25.4■■□□□ 1.66
CHD9-208ENST00000563410 VCAM1P19320 739 aa25.4■■□□□ 1.66
CHD9-208ENST00000563410 USP14P54578 494 aa25.4■■□□□ 1.66
CHD9-208ENST00000563410 MORN1Q5T089 497 aa25.4■■□□□ 1.66
CHD9-208ENST00000563410 CATSPERGQ6ZRH7 1159 aa25.4■■□□□ 1.66
CHD9-208ENST00000563410 LCORLQ8N3X6 602 aa25.4■■□□□ 1.66
CHD9-208ENST00000563410 ANKLE1Q8NAG6 615 aa25.4■■□□□ 1.66
CHD9-208ENST00000563410 CABP5Q9NP86 173 aa25.4■■□□□ 1.66
CHD9-208ENST00000563410 MCM9Q9NXL9 1143 aa25.4■■□□□ 1.66
CHD9-208ENST00000563410 RLFQ13129 1914 aa25.39■■□□□ 1.66
CHD9-208ENST00000563410 EVI5O60447 810 aa25.39■■□□□ 1.66
CHD9-208ENST00000563410 MNX1P50219 401 aaPredicted RBP25.39■■□□□ 1.66
CHD9-208ENST00000563410 SDR42E1Q8WUS8 393 aa25.39■■□□□ 1.66
CHD9-208ENST00000563410 DCP1AQ9NPI6 582 aaPredicted RBP25.39■■□□□ 1.66
CHD9-208ENST00000563410 RABGAP1Q9Y3P9 1069 aa25.39■■□□□ 1.66
CHD9-208ENST00000563410 PRKAR2AP13861 404 aaKnown RBP25.38■■□□□ 1.65
CHD9-208ENST00000563410 PDE3AQ14432 1141 aa25.38■■□□□ 1.65
CHD9-208ENST00000563410 SEPT2Q15019 361 aa25.38■■□□□ 1.65
CHD9-208ENST00000563410 NECAB2Q7Z6G3 386 aa25.38■■□□□ 1.65
CHD9-208ENST00000563410 PLEKHH3Q7Z736 793 aa25.38■■□□□ 1.65
CHD9-208ENST00000563410 BCL11AQ9H165 835 aa25.38■■□□□ 1.65
CHD9-208ENST00000563410 FRMPD3Q5JV73 1810 aa25.37■■□□□ 1.65
CHD9-208ENST00000563410 CCL14Q16627 93 aa25.37■■□□□ 1.65
CHD9-208ENST00000563410 SLFNL1Q499Z3 407 aa25.37■■□□□ 1.65
CHD9-208ENST00000563410 LBX2Q6XYB7 198 aa25.37■■□□□ 1.65
CHD9-208ENST00000563410 BOLA2Q9H3K6 86 aa25.37■■□□□ 1.65
CHD9-208ENST00000563410 PAG1Q9NWQ8 432 aa25.37■■□□□ 1.65
CHD9-208ENST00000563410 RCAN3Q9UKA8 241 aa25.37■■□□□ 1.65
CHD9-208ENST00000563410 OGDHLQ9ULD0 1010 aa25.37■■□□□ 1.65
CHD9-208ENST00000563410 CYP2D6P10635 497 aa25.36■■□□□ 1.65
CHD9-208ENST00000563410 RGS2P41220 211 aa25.36■■□□□ 1.65
CHD9-208ENST00000563410 CACNB2Q08289 660 aaPredicted RBP25.36■■□□□ 1.65
CHD9-208ENST00000563410 CCAR1Q8IX12 1150 aaKnown RBP25.36■■□□□ 1.65
CHD9-208ENST00000563410 TRMT44Q8IYL2 757 aaKnown RBP25.36■■□□□ 1.65
CHD9-208ENST00000563410 ARMT1Q9H993 441 aa25.36■■□□□ 1.65
CHD9-208ENST00000563410 A0A1W2PRG0 241 aa25.35■■□□□ 1.65
CHD9-208ENST00000563410 ZKSCAN1P17029 563 aaPredicted RBP25.35■■□□□ 1.65
CHD9-208ENST00000563410 ATP5JP18859 108 aa25.35■■□□□ 1.65
CHD9-208ENST00000563410 ADD2P35612 726 aa25.35■■□□□ 1.65
CHD9-208ENST00000563410 RPAP3Q9H6T3 665 aaPredicted RBP25.35■■□□□ 1.65
CHD9-208ENST00000563410 BTBD7Q9P203 1132 aa25.35■■□□□ 1.65
CHD9-208ENST00000563410 LAMA3Q16787 3333 aa25.34■■□□□ 1.65
CHD9-208ENST00000563410 SPDYE16A6NNV3 312 aaPredicted RBP25.34■■□□□ 1.65
CHD9-208ENST00000563410 PRKAB2O43741 272 aa25.34■■□□□ 1.65
CHD9-208ENST00000563410 C20orf194Q5TEA3 1177 aa25.34■■□□□ 1.65
CHD9-208ENST00000563410 SLC44A5Q8NCS7 719 aa25.34■■□□□ 1.65
CHD9-208ENST00000563410 APBA2Q99767 749 aa25.34■■□□□ 1.65
CHD9-208ENST00000563410 CHMP4BQ9H444 224 aaKnown RBP25.34■■□□□ 1.65
CHD9-208ENST00000563410 PARP14Q460N5 1801 aa25.34■■□□□ 1.65
CHD9-208ENST00000563410 A0A0G2JMZ2 1700 aa25.33■■□□□ 1.65
CHD9-208ENST00000563410 CHGBP05060 677 aa25.33■■□□□ 1.65
CHD9-208ENST00000563410 MAP2K5Q13163 448 aa25.33■■□□□ 1.65
CHD9-208ENST00000563410 HAUS7Q99871 368 aa25.33■■□□□ 1.65
CHD9-208ENST00000563410 NBPF3Q9H094 633 aa25.33■■□□□ 1.65
CHD9-208ENST00000563410 MPHOSPH10O00566 681 aaKnown RBP25.32■■□□□ 1.64
CHD9-208ENST00000563410 MBD4O95243 580 aa25.32■■□□□ 1.64
CHD9-208ENST00000563410 CCND3P30281 292 aaPredicted RBP25.32■■□□□ 1.64
CHD9-208ENST00000563410 CCNA1P78396 465 aa25.32■■□□□ 1.64
CHD9-208ENST00000563410 DYNLL2Q96FJ2 89 aa25.32■■□□□ 1.64
CHD9-208ENST00000563410 SMIM22K7EJ46 135 aa25.31■■□□□ 1.64
CHD9-208ENST00000563410 LHX8Q68G74 356 aa25.31■■□□□ 1.64
CHD9-208ENST00000563410 C11orf49Q9H6J7 331 aa25.31■■□□□ 1.64
CHD9-208ENST00000563410 CWC22Q9HCG8 908 aaKnown RBP25.31■■□□□ 1.64
CHD9-208ENST00000563410 FLRT1Q9NZU1 646 aa25.31■■□□□ 1.64
CHD9-208ENST00000563410 SWAP70Q9UH65 585 aa25.31■■□□□ 1.64
CHD9-208ENST00000563410 SLC15A5A6NIM6 579 aa25.3■■□□□ 1.64
CHD9-208ENST00000563410 PTPREP23469 700 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms