RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 CERS5Q8N5B7 392 aa22.05■■□□□ 1.12
SMPD3-203ENST00000563226 FAM205CA6NFA0 338 aa22.05■■□□□ 1.12
SMPD3-203ENST00000563226 ZNF165P49910 485 aa22.05■■□□□ 1.12
SMPD3-203ENST00000563226 DOK7Q18PE1 504 aa22.05■■□□□ 1.12
SMPD3-203ENST00000563226 DPP8Q6V1X1 898 aaPredicted RBP22.05■■□□□ 1.12
SMPD3-203ENST00000563226 MASTLQ96GX5 879 aa22.05■■□□□ 1.12
SMPD3-203ENST00000563226 PHF20Q9BVI0 1012 aa22.05■■□□□ 1.12
SMPD3-203ENST00000563226 MXD3Q9BW11 206 aa22.05■■□□□ 1.12
SMPD3-203ENST00000563226 NOL7Q9UMY1 257 aaKnown RBP22.05■■□□□ 1.12
SMPD3-203ENST00000563226 DAGLAQ9Y4D2 1042 aa22.05■■□□□ 1.12
SMPD3-203ENST00000563226 SNED1Q8TER0 1413 aa22.05■■□□□ 1.12
SMPD3-203ENST00000563226 RGPD3A6NKT7 1758 aaPredicted RBP22.04■■□□□ 1.12
SMPD3-203ENST00000563226 RGPD4Q7Z3J3 1758 aa22.04■■□□□ 1.12
SMPD3-203ENST00000563226 F8W031 263 aaPredicted RBP22.04■■□□□ 1.12
SMPD3-203ENST00000563226 ZNF202O95125 648 aa22.04■■□□□ 1.12
SMPD3-203ENST00000563226 RASA1P20936 1047 aa22.04■■□□□ 1.12
SMPD3-203ENST00000563226 ALDH1B1P30837 517 aa22.04■■□□□ 1.12
SMPD3-203ENST00000563226 QSER1Q2KHR3 1735 aa22.04■■□□□ 1.12
SMPD3-203ENST00000563226 SDF4Q9BRK5 362 aa22.04■■□□□ 1.12
SMPD3-203ENST00000563226 ANO8Q9HCE9 1232 aaPredicted RBP22.04■■□□□ 1.12
SMPD3-203ENST00000563226 PTMAP06454 111 aaKnown RBP22.03■■□□□ 1.12
SMPD3-203ENST00000563226 STX1AQ16623 288 aa22.03■■□□□ 1.12
SMPD3-203ENST00000563226 EARS2Q5JPH6 523 aaKnown RBP22.03■■□□□ 1.12
SMPD3-203ENST00000563226 ZC3H12CQ9C0D7 883 aaKnown RBP22.03■■□□□ 1.12
SMPD3-203ENST00000563226 KAT14Q9H8E8 782 aa22.03■■□□□ 1.12
SMPD3-203ENST00000563226 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.03■■□□□ 1.12
SMPD3-203ENST00000563226 PCDHB6Q9Y5E3 794 aa22.03■■□□□ 1.12
SMPD3-203ENST00000563226 TSPY3P0CV98 308 aa22.03■■□□□ 1.12
SMPD3-203ENST00000563226 TSPY8P0CW00 308 aa22.03■■□□□ 1.12
SMPD3-203ENST00000563226 DGKHQ86XP1 1220 aa22.03■■□□□ 1.12
SMPD3-203ENST00000563226 CERS3Q8IU89 383 aa22.03■■□□□ 1.12
SMPD3-203ENST00000563226 JMYQ8N9B5 988 aa22.03■■□□□ 1.12
SMPD3-203ENST00000563226 PIBF1Q8WXW3 757 aa22.03■■□□□ 1.12
SMPD3-203ENST00000563226 ZNF622Q969S3 477 aaKnown RBP eCLIP22.03■■□□□ 1.12
SMPD3-203ENST00000563226 HPSEQ9Y251 543 aa22.03■■□□□ 1.12
SMPD3-203ENST00000563226 VEGFAP15692 232 aaPredicted RBP22.02■■□□□ 1.12
SMPD3-203ENST00000563226 NPY5RQ15761 445 aa22.02■■□□□ 1.12
SMPD3-203ENST00000563226 SLF2Q8IX21 1173 aa22.02■■□□□ 1.12
SMPD3-203ENST00000563226 PNMA1Q8ND90 353 aa22.02■■□□□ 1.12
SMPD3-203ENST00000563226 CABP5Q9NP86 173 aa22.02■■□□□ 1.12
SMPD3-203ENST00000563226 PLCG2P16885 1265 aa22.02■■□□□ 1.11
SMPD3-203ENST00000563226 RILPL1Q5EBL4 403 aa22.02■■□□□ 1.11
SMPD3-203ENST00000563226 ZNF444Q8N0Y2 327 aaPredicted RBP22.02■■□□□ 1.11
SMPD3-203ENST00000563226 ANKS1AQ92625 1134 aa22.02■■□□□ 1.11
SMPD3-203ENST00000563226 ATP2B1P20020 1258 aa22.01■■□□□ 1.11
SMPD3-203ENST00000563226 CDK8P49336 464 aa22.01■■□□□ 1.11
SMPD3-203ENST00000563226 GRIN1Q05586 938 aa22.01■■□□□ 1.11
SMPD3-203ENST00000563226 RESP18Q5W5W9 173 aa22.01■■□□□ 1.11
SMPD3-203ENST00000563226 C16orf86Q6ZW13 317 aa22.01■■□□□ 1.11
SMPD3-203ENST00000563226 STAG2Q8N3U4 1231 aa22.01■■□□□ 1.11
SMPD3-203ENST00000563226 ZKSCAN5Q9Y2L8 839 aa22.01■■□□□ 1.11
SMPD3-203ENST00000563226 SLX4Q8IY92 1834 aa22.01■■□□□ 1.11
SMPD3-203ENST00000563226 CUTAO60888 179 aa22■■□□□ 1.11
SMPD3-203ENST00000563226 XBP1P17861 261 aa22■■□□□ 1.11
SMPD3-203ENST00000563226 MSNP26038 577 aaKnown RBP22■■□□□ 1.11
SMPD3-203ENST00000563226 KRT2P35908 639 aa22■■□□□ 1.11
SMPD3-203ENST00000563226 IQCB1Q15051 598 aa22■■□□□ 1.11
SMPD3-203ENST00000563226 NOM1Q5C9Z4 860 aaKnown RBP22■■□□□ 1.11
SMPD3-203ENST00000563226 C2CD5Q86YS7 1000 aa22■■□□□ 1.11
SMPD3-203ENST00000563226 RGS17Q9UGC6 210 aaPredicted RBP22■■□□□ 1.11
SMPD3-203ENST00000563226 SYKP43405 635 aa22■■□□□ 1.11
SMPD3-203ENST00000563226 TCP11L1Q9NUJ3 509 aa22■■□□□ 1.11
SMPD3-203ENST00000563226 FAM237AA0A1B0GTK4 181 aa21.99■■□□□ 1.11
SMPD3-203ENST00000563226 NT5C2P49902 561 aa21.99■■□□□ 1.11
SMPD3-203ENST00000563226 SPECC1Q5M775 1068 aa21.99■■□□□ 1.11
SMPD3-203ENST00000563226 KRI1Q8N9T8 703 aaKnown RBP21.99■■□□□ 1.11
SMPD3-203ENST00000563226 KIAA1468Q9P260 1216 aa21.99■■□□□ 1.11
SMPD3-203ENST00000563226 FBXO2Q9UK22 296 aaPredicted RBP21.99■■□□□ 1.11
SMPD3-203ENST00000563226 TTF2Q9UNY4 1162 aaKnown RBP21.99■■□□□ 1.11
SMPD3-203ENST00000563226 WNT7AO00755 349 aa21.99■■□□□ 1.11
SMPD3-203ENST00000563226 ADAMTS3O15072 1205 aa21.99■■□□□ 1.11
SMPD3-203ENST00000563226 SCG2P13521 617 aa21.99■■□□□ 1.11
SMPD3-203ENST00000563226 EZH2Q15910 746 aaKnown RBP21.99■■□□□ 1.11
SMPD3-203ENST00000563226 RASGRP2Q7LDG7 609 aa21.99■■□□□ 1.11
SMPD3-203ENST00000563226 TNFRSF25Q93038 417 aa21.99■■□□□ 1.11
SMPD3-203ENST00000563226 TMEM47Q9BQJ4 181 aa21.99■■□□□ 1.11
SMPD3-203ENST00000563226 MTMR7Q9Y216 660 aa21.99■■□□□ 1.11
SMPD3-203ENST00000563226 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.99■■□□□ 1.11
SMPD3-203ENST00000563226 KIF5BP33176 963 aa21.98■■□□□ 1.11
SMPD3-203ENST00000563226 PICALMQ13492 652 aa21.98■■□□□ 1.11
SMPD3-203ENST00000563226 GRM4Q14833 912 aa21.98■■□□□ 1.11
SMPD3-203ENST00000563226 SLC35G1Q2M3R5 365 aa21.98■■□□□ 1.11
SMPD3-203ENST00000563226 EYA3Q99504 573 aa21.98■■□□□ 1.11
SMPD3-203ENST00000563226 KCNQ5Q9NR82 932 aa21.98■■□□□ 1.11
SMPD3-203ENST00000563226 ANO10Q9NW15 660 aa21.98■■□□□ 1.11
SMPD3-203ENST00000563226 MAD2L2Q9UI95 211 aa21.98■■□□□ 1.11
SMPD3-203ENST00000563226 STX8Q9UNK0 236 aa21.98■■□□□ 1.11
SMPD3-203ENST00000563226 GOLGB1Q14789 3259 aaKnown RBP21.98■■□□□ 1.11
SMPD3-203ENST00000563226 CAVIN2O95810 425 aa21.97■■□□□ 1.11
SMPD3-203ENST00000563226 SCNN1DP51172 638 aa21.97■■□□□ 1.11
SMPD3-203ENST00000563226 PFKFB3Q16875 520 aaPredicted RBP21.97■■□□□ 1.11
SMPD3-203ENST00000563226 POTEAQ6S8J7 498 aa21.97■■□□□ 1.11
SMPD3-203ENST00000563226 ZNF830Q96NB3 372 aaPredicted RBP21.97■■□□□ 1.11
SMPD3-203ENST00000563226 DBNDD1Q9H9R9 158 aa21.97■■□□□ 1.11
SMPD3-203ENST00000563226 DDX4Q9NQI0 724 aaKnown RBP21.97■■□□□ 1.11
SMPD3-203ENST00000563226 PTPREP23469 700 aa21.97■■□□□ 1.11
SMPD3-203ENST00000563226 ZNF219Q9P2Y4 722 aaPredicted RBP21.97■■□□□ 1.11
SMPD3-203ENST00000563226 SUGT1Q9Y2Z0 365 aa21.97■■□□□ 1.11
SMPD3-203ENST00000563226 SCN9AQ15858 1988 aa21.96■■□□□ 1.11
SMPD3-203ENST00000563226 CHRNA5P30532 468 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms