RNA–Protein interactions for RNA: ENST00000563128.5

EPB42-204, Transcript of erythrocyte membrane protein band 4.2, humanhuman

TSL 3

Gene EPB42, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB42-204ENST00000563128 SIAH1Q8IUQ4 282 aa13.78□□□□□ -0.2
EPB42-204ENST00000563128 SPICE1Q8N0Z3 855 aa13.78□□□□□ -0.2
EPB42-204ENST00000563128 NKX2-3Q8TAU0 364 aa13.78□□□□□ -0.2
EPB42-204ENST00000563128 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.78□□□□□ -0.2
EPB42-204ENST00000563128 PRDM10Q9NQV6 1147 aa13.78□□□□□ -0.2
EPB42-204ENST00000563128 RANBP6O60518 1105 aaKnown RBP13.77□□□□□ -0.21
EPB42-204ENST00000563128 FKTNO75072 461 aa13.77□□□□□ -0.21
EPB42-204ENST00000563128 SLC3A2P08195 630 aaKnown RBP13.77□□□□□ -0.21
EPB42-204ENST00000563128 EEF2P13639 858 aaKnown RBP13.77□□□□□ -0.21
EPB42-204ENST00000563128 MFAP1P55081 439 aaKnown RBP13.77□□□□□ -0.21
EPB42-204ENST00000563128 CAP1Q01518 475 aa13.77□□□□□ -0.21
EPB42-204ENST00000563128 ICA1Q05084 483 aa13.77□□□□□ -0.21
EPB42-204ENST00000563128 USP17L2Q6R6M4 530 aa13.77□□□□□ -0.21
EPB42-204ENST00000563128 NAV1Q8NEY1 1877 aa13.77□□□□□ -0.21
EPB42-204ENST00000563128 CD99L2Q8TCZ2 262 aa13.77□□□□□ -0.21
EPB42-204ENST00000563128 CCDC17Q96LX7 622 aa13.77□□□□□ -0.21
EPB42-204ENST00000563128 THSD7BQ9C0I4 1608 aa13.77□□□□□ -0.21
EPB42-204ENST00000563128 AGTPBP1Q9UPW5 1226 aa13.77□□□□□ -0.21
EPB42-204ENST00000563128 MTMR7Q9Y216 660 aa13.77□□□□□ -0.21
EPB42-204ENST00000563128 FOCADQ5VW36 1801 aa13.76□□□□□ -0.21
EPB42-204ENST00000563128 NMT2O60551 498 aa13.76□□□□□ -0.21
EPB42-204ENST00000563128 PDE4BQ07343 736 aa13.76□□□□□ -0.21
EPB42-204ENST00000563128 ALX1Q15699 326 aa13.76□□□□□ -0.21
EPB42-204ENST00000563128 TBC1D10CQ8IV04 446 aa13.76□□□□□ -0.21
EPB42-204ENST00000563128 SMCR8Q8TEV9 937 aaPredicted RBP13.76□□□□□ -0.21
EPB42-204ENST00000563128 RUFY2Q8WXA3 655 aa13.76□□□□□ -0.21
EPB42-204ENST00000563128 P2RX7Q99572 595 aaKnown RBP13.76□□□□□ -0.21
EPB42-204ENST00000563128 ARHGAP39Q9C0H5 1083 aa13.76□□□□□ -0.21
EPB42-204ENST00000563128 GINM1Q9NU53 330 aa13.76□□□□□ -0.21
EPB42-204ENST00000563128 CLIP2Q9UDT6 1046 aa13.76□□□□□ -0.21
EPB42-204ENST00000563128 C19orf81C9J6K1 198 aa13.75□□□□□ -0.21
EPB42-204ENST00000563128 ZNF213O14771 459 aa13.75□□□□□ -0.21
EPB42-204ENST00000563128 TLR2O60603 784 aa13.75□□□□□ -0.21
EPB42-204ENST00000563128 TSPY3P0CV98 308 aa13.75□□□□□ -0.21
EPB42-204ENST00000563128 TSPY8P0CW00 308 aa13.75□□□□□ -0.21
EPB42-204ENST00000563128 SP3Q02447 781 aa13.75□□□□□ -0.21
EPB42-204ENST00000563128 SH3D19Q5HYK7 790 aa13.75□□□□□ -0.21
EPB42-204ENST00000563128 TNS4Q8IZW8 715 aa13.75□□□□□ -0.21
EPB42-204ENST00000563128 ANKRD13CQ8N6S4 541 aa13.75□□□□□ -0.21
EPB42-204ENST00000563128 PARK7Q99497 189 aaKnown RBP13.75□□□□□ -0.21
EPB42-204ENST00000563128 NBPF3Q9H094 633 aa13.75□□□□□ -0.21
EPB42-204ENST00000563128 ASCC2Q9H1I8 757 aaPredicted RBP13.75□□□□□ -0.21
EPB42-204ENST00000563128 CASP8AP2Q9UKL3 1982 aa13.74□□□□□ -0.21
EPB42-204ENST00000563128 TSPY2A6NKD2 308 aa13.74□□□□□ -0.21
EPB42-204ENST00000563128 OSBPP22059 807 aa13.74□□□□□ -0.21
EPB42-204ENST00000563128 IRX3P78415 501 aaPredicted RBP13.74□□□□□ -0.21
EPB42-204ENST00000563128 LRRC47Q8N1G4 583 aaKnown RBP13.74□□□□□ -0.21
EPB42-204ENST00000563128 PROCA1Q8NCQ7 364 aaPredicted RBP13.74□□□□□ -0.21
EPB42-204ENST00000563128 CEP95Q96GE4 821 aa13.74□□□□□ -0.21
EPB42-204ENST00000563128 NUP88Q99567 741 aaPredicted RBP13.74□□□□□ -0.21
EPB42-204ENST00000563128 ZKSCAN3Q9BRR0 538 aa13.74□□□□□ -0.21
EPB42-204ENST00000563128 TBC1D2Q9BYX2 928 aa13.74□□□□□ -0.21
EPB42-204ENST00000563128 KIAA1683Q9H0B3 1180 aa13.74□□□□□ -0.21
EPB42-204ENST00000563128 RPAP3Q9H6T3 665 aaPredicted RBP13.74□□□□□ -0.21
EPB42-204ENST00000563128 KANSL2Q9H9L4 492 aa13.74□□□□□ -0.21
EPB42-204ENST00000563128 ARHGEF10LQ9HCE6 1279 aa13.74□□□□□ -0.21
EPB42-204ENST00000563128 ISY1Q9ULR0 285 aaKnown RBP13.74□□□□□ -0.21
EPB42-204ENST00000563128 DOCK1Q14185 1865 aa13.74□□□□□ -0.21
EPB42-204ENST00000563128 DDX60LQ5H9U9 1706 aaKnown RBP13.73□□□□□ -0.21
EPB42-204ENST00000563128 SGSM2O43147 1006 aa13.73□□□□□ -0.21
EPB42-204ENST00000563128 CAPN15O75808 1086 aa13.73□□□□□ -0.21
EPB42-204ENST00000563128 VCAM1P19320 739 aa13.73□□□□□ -0.21
EPB42-204ENST00000563128 BMP2KLQ5H9B9 411 aa13.73□□□□□ -0.21
EPB42-204ENST00000563128 ERICH6BQ5W0A0 696 aa13.73□□□□□ -0.21
EPB42-204ENST00000563128 C17orf99Q6UX52 265 aa13.73□□□□□ -0.21
EPB42-204ENST00000563128 MFSD6Q6ZSS7 791 aa13.73□□□□□ -0.21
EPB42-204ENST00000563128 TICAM2Q86XR7 235 aa13.73□□□□□ -0.21
EPB42-204ENST00000563128 PAGR1Q9BTK6 254 aa13.73□□□□□ -0.21
EPB42-204ENST00000563128 DSCC1Q9BVC3 393 aa13.73□□□□□ -0.21
EPB42-204ENST00000563128 TANGO6Q9C0B7 1094 aa13.73□□□□□ -0.21
EPB42-204ENST00000563128 ZNF287Q9HBT7 754 aa13.73□□□□□ -0.21
EPB42-204ENST00000563128 ANAPC4Q9UJX5 808 aa13.73□□□□□ -0.21
EPB42-204ENST00000563128 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.73□□□□□ -0.21
EPB42-204ENST00000563128 TRIM17Q9Y577 477 aa13.73□□□□□ -0.21
EPB42-204ENST00000563128 ROBO3Q96MS0 1386 aa13.72□□□□□ -0.21
EPB42-204ENST00000563128 NEDD4P46934 1319 aa13.72□□□□□ -0.21
EPB42-204ENST00000563128 CTGFP29279 349 aa13.72□□□□□ -0.21
EPB42-204ENST00000563128 USP14P54578 494 aa13.72□□□□□ -0.21
EPB42-204ENST00000563128 AKNAD1Q5T1N1 836 aa13.72□□□□□ -0.21
EPB42-204ENST00000563128 KIAA1211Q6ZU35 1233 aa13.72□□□□□ -0.21
EPB42-204ENST00000563128 NEDD1Q8NHV4 660 aa13.72□□□□□ -0.21
EPB42-204ENST00000563128 ESYT1Q9BSJ8 1104 aa13.72□□□□□ -0.21
EPB42-204ENST00000563128 CFHR5Q9BXR6 569 aa13.72□□□□□ -0.21
EPB42-204ENST00000563128 MCOLN1Q9GZU1 580 aa13.72□□□□□ -0.21
EPB42-204ENST00000563128 IL17RBQ9NRM6 502 aa13.72□□□□□ -0.21
EPB42-204ENST00000563128 TMX2Q9Y320 296 aa13.72□□□□□ -0.21
EPB42-204ENST00000563128 TAF6LQ9Y6J9 622 aa13.72□□□□□ -0.21
EPB42-204ENST00000563128 B4E1Z4 1266 aa13.71□□□□□ -0.21
EPB42-204ENST00000563128 USP17L15C9J2P7 530 aa13.71□□□□□ -0.21
EPB42-204ENST00000563128 USP17L13C9JLJ4 530 aa13.71□□□□□ -0.21
EPB42-204ENST00000563128 USP17L11C9JVI0 530 aa13.71□□□□□ -0.21
EPB42-204ENST00000563128 USP17L18D6R9N7 530 aa13.71□□□□□ -0.21
EPB42-204ENST00000563128 USP17L22D6RA61 530 aa13.71□□□□□ -0.21
EPB42-204ENST00000563128 USP17L17D6RBQ6 530 aa13.71□□□□□ -0.21
EPB42-204ENST00000563128 USP17L19D6RCP7 530 aa13.71□□□□□ -0.21
EPB42-204ENST00000563128 USP17L20D6RJB6 530 aa13.71□□□□□ -0.21
EPB42-204ENST00000563128 FMNL1O95466 1100 aaPredicted RBP13.71□□□□□ -0.21
EPB42-204ENST00000563128 PSMC4P43686 418 aa13.71□□□□□ -0.21
EPB42-204ENST00000563128 USP17L24Q0WX57 530 aa13.71□□□□□ -0.21
EPB42-204ENST00000563128 PABPC4Q13310 644 aaKnown RBP eCLIP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms