RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 GUCY1A2P33402 732 aa22.19■■□□□ 1.14
RAB40C-207ENST00000563109 ZNF280CQ8ND82 737 aa22.19■■□□□ 1.14
RAB40C-207ENST00000563109 CAPNS2Q96L46 248 aa22.19■■□□□ 1.14
RAB40C-207ENST00000563109 WDR18Q9BV38 432 aa22.19■■□□□ 1.14
RAB40C-207ENST00000563109 SH2D4AQ9H788 454 aa22.19■■□□□ 1.14
RAB40C-207ENST00000563109 SNX14Q9Y5W7 946 aa22.19■■□□□ 1.14
RAB40C-207ENST00000563109 TRIM75PA6NK02 468 aa22.18■■□□□ 1.14
RAB40C-207ENST00000563109 ATP2B2Q01814 1243 aa22.18■■□□□ 1.14
RAB40C-207ENST00000563109 MKRN3Q13064 507 aaKnown RBP22.18■■□□□ 1.14
RAB40C-207ENST00000563109 CCDC178Q5BJE1 867 aa22.18■■□□□ 1.14
RAB40C-207ENST00000563109 RASEFQ8IZ41 740 aa22.18■■□□□ 1.14
RAB40C-207ENST00000563109 CEP95Q96GE4 821 aa22.18■■□□□ 1.14
RAB40C-207ENST00000563109 UBAC1Q9BSL1 405 aa22.18■■□□□ 1.14
RAB40C-207ENST00000563109 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.18■■□□□ 1.14
RAB40C-207ENST00000563109 AFG3L2Q9Y4W6 797 aa22.18■■□□□ 1.14
RAB40C-207ENST00000563109 PTPRFP10586 1907 aa22.18■■□□□ 1.14
RAB40C-207ENST00000563109 IGKV6D-41A0A0C4DH26 115 aa22.17■■□□□ 1.14
RAB40C-207ENST00000563109 IRF6O14896 467 aa22.17■■□□□ 1.14
RAB40C-207ENST00000563109 GJA5P36382 358 aa22.17■■□□□ 1.14
RAB40C-207ENST00000563109 SNAPC2Q13487 334 aa22.17■■□□□ 1.14
RAB40C-207ENST00000563109 SART3Q15020 963 aaKnown RBP22.17■■□□□ 1.14
RAB40C-207ENST00000563109 NEK1Q96PY6 1258 aa22.17■■□□□ 1.14
RAB40C-207ENST00000563109 BACH2Q9BYV9 841 aa22.17■■□□□ 1.14
RAB40C-207ENST00000563109 TCP11L1Q9NUJ3 509 aa22.17■■□□□ 1.14
RAB40C-207ENST00000563109 FAM155AB1AL88 458 aaPredicted RBP22.16■■□□□ 1.14
RAB40C-207ENST00000563109 CXCL11O14625 94 aa22.16■■□□□ 1.14
RAB40C-207ENST00000563109 TTLL1O95922 423 aa22.16■■□□□ 1.14
RAB40C-207ENST00000563109 HMGB1P09429 215 aaKnown RBP22.16■■□□□ 1.14
RAB40C-207ENST00000563109 PSMA5P28066 241 aa22.16■■□□□ 1.14
RAB40C-207ENST00000563109 MCM5P33992 734 aa22.16■■□□□ 1.14
RAB40C-207ENST00000563109 GTF2A2P52657 109 aa22.16■■□□□ 1.14
RAB40C-207ENST00000563109 ANAPC15P60006 121 aa22.16■■□□□ 1.14
RAB40C-207ENST00000563109 SPP2Q13103 211 aa22.16■■□□□ 1.14
RAB40C-207ENST00000563109 NOGQ13253 232 aa22.16■■□□□ 1.14
RAB40C-207ENST00000563109 CLEC10AQ8IUN9 316 aa22.16■■□□□ 1.14
RAB40C-207ENST00000563109 MB21D2Q8IYB1 491 aaPredicted RBP22.16■■□□□ 1.14
RAB40C-207ENST00000563109 JAKMIP1Q96N16 626 aaKnown RBP22.16■■□□□ 1.14
RAB40C-207ENST00000563109 MTMR4Q9NYA4 1195 aa22.16■■□□□ 1.14
RAB40C-207ENST00000563109 ZSWIM5Q9P217 1185 aa22.16■■□□□ 1.14
RAB40C-207ENST00000563109 NYAP2Q9P242 653 aa22.16■■□□□ 1.14
RAB40C-207ENST00000563109 STX8Q9UNK0 236 aa22.16■■□□□ 1.14
RAB40C-207ENST00000563109 KCNH4Q9UQ05 1017 aa22.16■■□□□ 1.14
RAB40C-207ENST00000563109 LOC285556D6RIA3 1793 aa22.15■■□□□ 1.14
RAB40C-207ENST00000563109 WDR33Q9C0J8 1336 aaKnown RBP22.15■■□□□ 1.14
RAB40C-207ENST00000563109 ERICH2A1L162 156 aa22.15■■□□□ 1.14
RAB40C-207ENST00000563109 MANSC4A6NHS7 340 aaPredicted RBP22.15■■□□□ 1.14
RAB40C-207ENST00000563109 USP17L10C9JJH3 530 aa22.15■■□□□ 1.14
RAB40C-207ENST00000563109 EEF2P13639 858 aaKnown RBP22.15■■□□□ 1.14
RAB40C-207ENST00000563109 MTMR2Q13614 643 aa22.15■■□□□ 1.14
RAB40C-207ENST00000563109 THSD7BQ9C0I4 1608 aa22.15■■□□□ 1.14
RAB40C-207ENST00000563109 C19orf81C9J6K1 198 aa22.14■■□□□ 1.13
RAB40C-207ENST00000563109 NMT2O60551 498 aa22.14■■□□□ 1.13
RAB40C-207ENST00000563109 USP14P54578 494 aa22.14■■□□□ 1.13
RAB40C-207ENST00000563109 ADCK5Q3MIX3 580 aa22.14■■□□□ 1.13
RAB40C-207ENST00000563109 CYB5R4Q7L1T6 521 aa22.14■■□□□ 1.13
RAB40C-207ENST00000563109 ZSCAN10Q96SZ4 725 aaPredicted RBP22.14■■□□□ 1.13
RAB40C-207ENST00000563109 ZKSCAN3Q9BRR0 538 aa22.14■■□□□ 1.13
RAB40C-207ENST00000563109 C22orf23Q9BZE7 217 aa22.14■■□□□ 1.13
RAB40C-207ENST00000563109 IL17RBQ9NRM6 502 aa22.14■■□□□ 1.13
RAB40C-207ENST00000563109 TMOD4Q9NZQ9 345 aa22.14■■□□□ 1.13
RAB40C-207ENST00000563109 CLIP2Q9UDT6 1046 aa22.14■■□□□ 1.13
RAB40C-207ENST00000563109 TNKSO95271 1327 aa22.13■■□□□ 1.13
RAB40C-207ENST00000563109 PRC1O43663 620 aa22.13■■□□□ 1.13
RAB40C-207ENST00000563109 CETPP11597 493 aa22.13■■□□□ 1.13
RAB40C-207ENST00000563109 VEGFBP49765 207 aa22.13■■□□□ 1.13
RAB40C-207ENST00000563109 BACE1P56817 501 aa22.13■■□□□ 1.13
RAB40C-207ENST00000563109 SREBF2Q12772 1141 aa22.13■■□□□ 1.13
RAB40C-207ENST00000563109 BLOC1S2Q6QNY1 142 aa22.13■■□□□ 1.13
RAB40C-207ENST00000563109 NKX2-3Q8TAU0 364 aa22.13■■□□□ 1.13
RAB40C-207ENST00000563109 ACER1Q8TDN7 264 aa22.13■■□□□ 1.13
RAB40C-207ENST00000563109 KIAA1683Q9H0B3 1180 aa22.13■■□□□ 1.13
RAB40C-207ENST00000563109 SYNPO2Q9UMS6 1093 aa22.13■■□□□ 1.13
RAB40C-207ENST00000563109 A0A0G2JLL6 359 aaPredicted RBP22.12■■□□□ 1.13
RAB40C-207ENST00000563109 IFIT3O14879 490 aaKnown RBP22.12■■□□□ 1.13
RAB40C-207ENST00000563109 CASTP20810 708 aaKnown RBP22.12■■□□□ 1.13
RAB40C-207ENST00000563109 ZYXQ15942 572 aaKnown RBP22.12■■□□□ 1.13
RAB40C-207ENST00000563109 USP17L2Q6R6M4 530 aa22.12■■□□□ 1.13
RAB40C-207ENST00000563109 FASTKD5Q7L8L6 764 aaKnown RBP22.12■■□□□ 1.13
RAB40C-207ENST00000563109 PRRT2Q7Z6L0 340 aaPredicted RBP22.12■■□□□ 1.13
RAB40C-207ENST00000563109 TTC14Q96N46 770 aa22.12■■□□□ 1.13
RAB40C-207ENST00000563109 MTA3Q9BTC8 594 aa22.12■■□□□ 1.13
RAB40C-207ENST00000563109 GOPCQ9HD26 462 aa22.12■■□□□ 1.13
RAB40C-207ENST00000563109 TMX2Q9Y320 296 aa22.12■■□□□ 1.13
RAB40C-207ENST00000563109 WDR19Q8NEZ3 1342 aa22.11■■□□□ 1.13
RAB40C-207ENST00000563109 CCL15-CCL14A0A0B4J2E2 113 aa22.11■■□□□ 1.13
RAB40C-207ENST00000563109 TOP1P11387 765 aaKnown RBP22.11■■□□□ 1.13
RAB40C-207ENST00000563109 HMGCS2P54868 508 aa22.11■■□□□ 1.13
RAB40C-207ENST00000563109 CCL15Q16663 113 aa22.11■■□□□ 1.13
RAB40C-207ENST00000563109 TMEM67Q5HYA8 995 aa22.11■■□□□ 1.13
RAB40C-207ENST00000563109 GADL1Q6ZQY3 521 aa22.11■■□□□ 1.13
RAB40C-207ENST00000563109 DHX32Q7L7V1 743 aaKnown RBP22.11■■□□□ 1.13
RAB40C-207ENST00000563109 CHST3Q7LGC8 479 aa22.11■■□□□ 1.13
RAB40C-207ENST00000563109 DGKHQ86XP1 1220 aa22.11■■□□□ 1.13
RAB40C-207ENST00000563109 REM2Q8IYK8 340 aaPredicted RBP22.11■■□□□ 1.13
RAB40C-207ENST00000563109 LRRC47Q8N1G4 583 aaKnown RBP22.11■■□□□ 1.13
RAB40C-207ENST00000563109 TMEM87BQ96K49 555 aa22.11■■□□□ 1.13
RAB40C-207ENST00000563109 A0A1W2PRG0 241 aa22.1■■□□□ 1.13
RAB40C-207ENST00000563109 RAD21O60216 631 aa22.1■■□□□ 1.13
RAB40C-207ENST00000563109 AOC2O75106 756 aa22.1■■□□□ 1.13
RAB40C-207ENST00000563109 INHBEP58166 350 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms